EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000018318 (Gene tree)
Gene ID: 101935559
Gene Symbol: NMD3
Alias: CGI-07
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 17430 bases
Position: chrKK088236.1:6446100-6463529
Accession: 24250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025805	NMD3	PF04981.13	2e-82	1	1
ENSCPBP00000025806	NMD3	PF04981.13	9.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000030392	NMD3-201	1709	-	ENSCPBP00000025805	504 (aa)	XP_008163218	UPI0003889DE2
ENSCPBT00000030393	NMD3-202	2033	-	ENSCPBP00000025806	474 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000018318's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018318	NMD3	99	85.470	ENSG00000169251	NMD3	100	84.294	Homo_sapiens
ENSCPBG00000018318	NMD3	99	82.278	ENSAPOG00000022912	nmd3	99	81.746	Acanthochromis_polyacanthus
ENSCPBG00000018318	NMD3	100	85.053	ENSAMEG00000001584	NMD3	100	83.960	Ailuropoda_melanoleuca
ENSCPBG00000018318	NMD3	99	78.481	ENSACIG00000015196	nmd3	99	78.175	Amphilophus_citrinellus
ENSCPBG00000018318	NMD3	99	82.911	ENSAOCG00000009086	nmd3	99	82.341	Amphiprion_ocellaris
ENSCPBG00000018318	NMD3	99	82.700	ENSAPEG00000000329	nmd3	99	82.143	Amphiprion_percula
ENSCPBG00000018318	NMD3	99	83.333	ENSATEG00000014351	nmd3	99	82.540	Anabas_testudineus
ENSCPBG00000018318	NMD3	100	85.654	ENSAPLG00000014786	NMD3	100	85.119	Anas_platyrhynchos
ENSCPBG00000018318	NMD3	100	90.928	ENSACAG00000007349	NMD3	100	90.476	Anolis_carolinensis
ENSCPBG00000018318	NMD3	99	85.256	ENSANAG00000026434	NMD3	99	84.337	Aotus_nancymaae
ENSCPBG00000018318	NMD3	99	83.333	ENSACLG00000015520	nmd3	99	82.540	Astatotilapia_calliptera
ENSCPBG00000018318	NMD3	99	81.857	ENSAMXG00000014415	nmd3	99	81.349	Astyanax_mexicanus
ENSCPBG00000018318	NMD3	99	85.412	ENSBTAG00000016228	NMD3	100	84.493	Bos_taurus
ENSCPBG00000018318	NMD3	100	49.284	WBGene00012030	T25G3.3	99	49.804	Caenorhabditis_elegans
ENSCPBG00000018318	NMD3	99	85.653	ENSCJAG00000002900	NMD3	97	84.708	Callithrix_jacchus
ENSCPBG00000018318	NMD3	99	84.797	ENSCAFG00000014352	NMD3	97	83.300	Canis_familiaris
ENSCPBG00000018318	NMD3	100	84.388	ENSCAFG00020021145	NMD3	100	82.937	Canis_lupus_dingo
ENSCPBG00000018318	NMD3	99	84.989	ENSCHIG00000016015	NMD3	100	84.294	Capra_hircus
ENSCPBG00000018318	NMD3	99	85.412	ENSTSYG00000002155	NMD3	99	84.294	Carlito_syrichta
ENSCPBG00000018318	NMD3	84	82.957	ENSCAPG00000017861	NMD3	93	82.957	Cavia_aperea
ENSCPBG00000018318	NMD3	87	83.295	ENSCPOG00000005953	NMD3	94	83.295	Cavia_porcellus
ENSCPBG00000018318	NMD3	99	85.684	ENSCCAG00000037460	NMD3	100	84.692	Cebus_capucinus
ENSCPBG00000018318	NMD3	99	84.989	ENSCATG00000030022	NMD3	100	84.095	Cercocebus_atys
ENSCPBG00000018318	NMD3	99	83.932	ENSCLAG00000003155	NMD3	100	82.306	Chinchilla_lanigera
ENSCPBG00000018318	NMD3	99	84.989	ENSCSAG00000012333	NMD3	100	84.095	Chlorocebus_sabaeus
ENSCPBG00000018318	NMD3	80	86.572	ENSCHOG00000001240	NMD3	80	86.572	Choloepus_hoffmanni
ENSCPBG00000018318	NMD3	98	54.701	ENSCING00000002129	-	96	55.144	Ciona_intestinalis
ENSCPBG00000018318	NMD3	93	53.968	ENSCSAVG00000001120	-	97	53.968	Ciona_savignyi
ENSCPBG00000018318	NMD3	99	78.602	ENSCANG00000042939	NMD3	95	78.088	Colobus_angolensis_palliatus
ENSCPBG00000018318	NMD3	97	73.696	ENSCGRG00001001792	Nmd3	97	73.696	Cricetulus_griseus_chok1gshd
ENSCPBG00000018318	NMD3	99	83.721	ENSCGRG00000007947	Nmd3	98	83.265	Cricetulus_griseus_crigri
ENSCPBG00000018318	NMD3	99	82.278	ENSCSEG00000017954	nmd3	99	81.944	Cynoglossus_semilaevis
ENSCPBG00000018318	NMD3	99	74.684	ENSCVAG00000004672	nmd3	99	75.000	Cyprinodon_variegatus
ENSCPBG00000018318	NMD3	99	79.579	ENSDARG00000015676	nmd3	99	79.208	Danio_rerio
ENSCPBG00000018318	NMD3	99	83.298	ENSDNOG00000045222	NMD3	100	82.306	Dasypus_novemcinctus
ENSCPBG00000018318	NMD3	99	73.784	ENSDORG00000005716	Nmd3	100	71.053	Dipodomys_ordii
ENSCPBG00000018318	NMD3	99	53.992	FBgn0023542	Nmd3	95	54.418	Drosophila_melanogaster
ENSCPBG00000018318	NMD3	99	71.968	ENSETEG00000003168	NMD3	99	71.968	Echinops_telfairi
ENSCPBG00000018318	NMD3	95	58.222	ENSEBUG00000014316	nmd3	97	58.222	Eptatretus_burgeri
ENSCPBG00000018318	NMD3	99	85.201	ENSEASG00005018672	NMD3	100	84.294	Equus_asinus_asinus
ENSCPBG00000018318	NMD3	99	85.653	ENSECAG00000000188	NMD3	97	84.708	Equus_caballus
ENSCPBG00000018318	NMD3	96	58.991	ENSEEUG00000010642	-	100	59.660	Erinaceus_europaeus
ENSCPBG00000018318	NMD3	100	79.789	ENSELUG00000024123	nmd3	100	79.604	Esox_lucius
ENSCPBG00000018318	NMD3	100	84.810	ENSFCAG00000022867	NMD3	100	83.730	Felis_catus
ENSCPBG00000018318	NMD3	100	89.451	ENSFALG00000008711	NMD3	100	89.451	Ficedula_albicollis
ENSCPBG00000018318	NMD3	99	83.333	ENSFDAG00000013724	-	100	82.341	Fukomys_damarensis
ENSCPBG00000018318	NMD3	99	68.354	ENSFDAG00000012197	-	100	66.865	Fukomys_damarensis
ENSCPBG00000018318	NMD3	100	81.263	ENSFHEG00000000415	nmd3	100	80.990	Fundulus_heteroclitus
ENSCPBG00000018318	NMD3	99	77.637	ENSGMOG00000009675	nmd3	99	77.914	Gadus_morhua
ENSCPBG00000018318	NMD3	100	87.975	ENSGALG00000009533	NMD3	100	86.905	Gallus_gallus
ENSCPBG00000018318	NMD3	99	81.489	ENSGAFG00000012798	nmd3	95	81.000	Gambusia_affinis
ENSCPBG00000018318	NMD3	100	81.053	ENSGACG00000010028	nmd3	100	80.198	Gasterosteus_aculeatus
ENSCPBG00000018318	NMD3	100	96.835	ENSGAGG00000006556	NMD3	100	96.825	Gopherus_agassizii
ENSCPBG00000018318	NMD3	99	68.856	ENSGGOG00000028590	-	99	68.725	Gorilla_gorilla
ENSCPBG00000018318	NMD3	99	85.256	ENSGGOG00000007157	NMD3	100	84.294	Gorilla_gorilla
ENSCPBG00000018318	NMD3	99	83.333	ENSHBUG00000001781	nmd3	99	82.540	Haplochromis_burtoni
ENSCPBG00000018318	NMD3	99	67.653	ENSHGLG00000010477	-	100	66.998	Heterocephalus_glaber_female
ENSCPBG00000018318	NMD3	99	84.144	ENSHGLG00000014451	-	100	82.704	Heterocephalus_glaber_female
ENSCPBG00000018318	NMD3	99	84.144	ENSHGLG00100006613	-	100	82.704	Heterocephalus_glaber_male
ENSCPBG00000018318	NMD3	99	67.442	ENSHGLG00100001042	-	100	66.799	Heterocephalus_glaber_male
ENSCPBG00000018318	NMD3	99	82.875	ENSHCOG00000004292	nmd3	92	81.710	Hippocampus_comes
ENSCPBG00000018318	NMD3	99	82.700	ENSIPUG00000005073	nmd3	99	82.341	Ictalurus_punctatus
ENSCPBG00000018318	NMD3	99	84.989	ENSSTOG00000001899	NMD3	100	84.095	Ictidomys_tridecemlineatus
ENSCPBG00000018318	NMD3	99	84.567	ENSJJAG00000019759	Nmd3	99	84.426	Jaculus_jaculus
ENSCPBG00000018318	NMD3	99	82.068	ENSKMAG00000020427	nmd3	99	81.548	Kryptolebias_marmoratus
ENSCPBG00000018318	NMD3	100	81.342	ENSLBEG00000022216	nmd3	100	80.671	Labrus_bergylta
ENSCPBG00000018318	NMD3	99	80.522	ENSLACG00000005731	NMD3	99	83.982	Latimeria_chalumnae
ENSCPBG00000018318	NMD3	100	84.842	ENSLOCG00000003561	nmd3	100	84.158	Lepisosteus_oculatus
ENSCPBG00000018318	NMD3	99	81.857	ENSLAFG00000007231	NMD3	100	80.952	Loxodonta_africana
ENSCPBG00000018318	NMD3	99	84.989	ENSMFAG00000040934	NMD3	100	84.095	Macaca_fascicularis
ENSCPBG00000018318	NMD3	99	84.322	ENSMMUG00000009564	NMD3	99	84.887	Macaca_mulatta
ENSCPBG00000018318	NMD3	99	84.989	ENSMNEG00000034626	NMD3	100	84.095	Macaca_nemestrina
ENSCPBG00000018318	NMD3	93	84.876	ENSMLEG00000002741	NMD3	100	84.876	Mandrillus_leucophaeus
ENSCPBG00000018318	NMD3	99	82.489	ENSMAMG00000012427	nmd3	99	81.944	Mastacembelus_armatus
ENSCPBG00000018318	NMD3	99	83.333	ENSMZEG00005016888	nmd3	99	82.540	Maylandia_zebra
ENSCPBG00000018318	NMD3	100	87.975	ENSMGAG00000010498	NMD3	100	87.103	Meleagris_gallopavo
ENSCPBG00000018318	NMD3	99	83.298	ENSMAUG00000000633	Nmd3	100	82.704	Mesocricetus_auratus
ENSCPBG00000018318	NMD3	99	84.778	ENSMICG00000049196	NMD3	100	83.897	Microcebus_murinus
ENSCPBG00000018318	NMD3	99	83.087	ENSMOCG00000005180	Nmd3	100	82.470	Microtus_ochrogaster
ENSCPBG00000018318	NMD3	99	81.895	ENSMMOG00000012765	nmd3	99	81.188	Mola_mola
ENSCPBG00000018318	NMD3	99	64.547	ENSMODG00000016296	NMD3	100	66.281	Monodelphis_domestica
ENSCPBG00000018318	NMD3	99	82.068	ENSMALG00000009256	nmd3	99	81.548	Monopterus_albus
ENSCPBG00000018318	NMD3	99	83.510	MGP_CAROLIEiJ_G0025069	Nmd3	100	82.704	Mus_caroli
ENSCPBG00000018318	NMD3	99	83.510	ENSMUSG00000027787	Nmd3	100	82.704	Mus_musculus
ENSCPBG00000018318	NMD3	99	83.510	MGP_PahariEiJ_G0026512	Nmd3	100	82.704	Mus_pahari
ENSCPBG00000018318	NMD3	99	83.721	MGP_SPRETEiJ_G0026011	Nmd3	100	82.903	Mus_spretus
ENSCPBG00000018318	NMD3	100	85.654	ENSMPUG00000002955	NMD3	100	84.524	Mustela_putorius_furo
ENSCPBG00000018318	NMD3	99	80.672	ENSMLUG00000000701	NMD3	97	80.448	Myotis_lucifugus
ENSCPBG00000018318	NMD3	99	83.686	ENSNGAG00000012307	Nmd3	99	82.669	Nannospalax_galili
ENSCPBG00000018318	NMD3	99	82.700	ENSNBRG00000003324	nmd3	99	82.143	Neolamprologus_brichardi
ENSCPBG00000018318	NMD3	99	84.989	ENSNLEG00000004655	NMD3	99	85.209	Nomascus_leucogenys
ENSCPBG00000018318	NMD3	77	72.807	ENSOPRG00000007690	-	73	72.807	Ochotona_princeps
ENSCPBG00000018318	NMD3	99	84.989	ENSODEG00000006270	NMD3	100	84.095	Octodon_degus
ENSCPBG00000018318	NMD3	99	83.966	ENSONIG00000003643	nmd3	99	83.333	Oreochromis_niloticus
ENSCPBG00000018318	NMD3	99	84.681	ENSOCUG00000017454	NMD3	100	83.600	Oryctolagus_cuniculus
ENSCPBG00000018318	NMD3	99	82.068	ENSORLG00000006279	nmd3	99	81.548	Oryzias_latipes
ENSCPBG00000018318	NMD3	99	81.857	ENSORLG00020003843	nmd3	99	81.349	Oryzias_latipes_hni
ENSCPBG00000018318	NMD3	99	82.030	ENSORLG00015006379	nmd3	99	81.511	Oryzias_latipes_hsok
ENSCPBG00000018318	NMD3	100	82.105	ENSOMEG00000012144	nmd3	100	81.584	Oryzias_melastigma
ENSCPBG00000018318	NMD3	99	84.989	ENSOGAG00000014910	NMD3	100	83.698	Otolemur_garnettii
ENSCPBG00000018318	NMD3	99	84.861	ENSOARG00000001883	NMD3	97	84.168	Ovis_aries
ENSCPBG00000018318	NMD3	99	85.043	ENSPPAG00000043829	NMD3	100	83.897	Pan_paniscus
ENSCPBG00000018318	NMD3	99	85.256	ENSPPRG00000000724	NMD3	97	84.137	Panthera_pardus
ENSCPBG00000018318	NMD3	100	84.810	ENSPTIG00000016761	NMD3	100	83.532	Panthera_tigris_altaica
ENSCPBG00000018318	NMD3	99	85.256	ENSPTRG00000015586	NMD3	100	83.897	Pan_troglodytes
ENSCPBG00000018318	NMD3	99	84.322	ENSPANG00000006665	NMD3	95	83.466	Papio_anubis
ENSCPBG00000018318	NMD3	100	80.632	ENSPKIG00000009928	nmd3	100	80.000	Paramormyrops_kingsleyae
ENSCPBG00000018318	NMD3	100	95.359	ENSPSIG00000007591	NMD3	100	95.238	Pelodiscus_sinensis
ENSCPBG00000018318	NMD3	99	78.692	ENSPMGG00000014015	nmd3	99	77.976	Periophthalmus_magnuspinnatus
ENSCPBG00000018318	NMD3	99	83.932	ENSPEMG00000021880	Nmd3	100	83.300	Peromyscus_maniculatus_bairdii
ENSCPBG00000018318	NMD3	99	88.372	ENSPCIG00000020869	NMD3	100	86.879	Phascolarctos_cinereus
ENSCPBG00000018318	NMD3	99	82.278	ENSPFOG00000012103	nmd3	99	81.746	Poecilia_formosa
ENSCPBG00000018318	NMD3	99	82.278	ENSPLAG00000008087	nmd3	99	81.944	Poecilia_latipinna
ENSCPBG00000018318	NMD3	99	82.278	ENSPMEG00000008506	nmd3	99	81.746	Poecilia_mexicana
ENSCPBG00000018318	NMD3	99	82.278	ENSPREG00000001848	nmd3	99	81.944	Poecilia_reticulata
ENSCPBG00000018318	NMD3	99	85.412	ENSPPYG00000014263	NMD3	100	84.493	Pongo_abelii
ENSCPBG00000018318	NMD3	91	66.977	ENSPCAG00000009851	NMD3	100	66.957	Procavia_capensis
ENSCPBG00000018318	NMD3	84	78.652	ENSPVAG00000003301	NMD3	85	75.630	Pteropus_vampyrus
ENSCPBG00000018318	NMD3	99	83.333	ENSPNYG00000006778	nmd3	99	82.540	Pundamilia_nyererei
ENSCPBG00000018318	NMD3	99	81.857	ENSPNAG00000009442	nmd3	99	81.548	Pygocentrus_nattereri
ENSCPBG00000018318	NMD3	99	83.298	ENSRNOG00000009310	Nmd3	100	82.704	Rattus_norvegicus
ENSCPBG00000018318	NMD3	99	81.395	ENSRBIG00000040379	NMD3	100	80.716	Rhinopithecus_bieti
ENSCPBG00000018318	NMD3	99	84.778	ENSRROG00000036181	NMD3	100	83.897	Rhinopithecus_roxellana
ENSCPBG00000018318	NMD3	96	46.444	YHR170W	NMD3	97	45.614	Saccharomyces_cerevisiae
ENSCPBG00000018318	NMD3	99	85.624	ENSSBOG00000024021	NMD3	98	85.163	Saimiri_boliviensis_boliviensis
ENSCPBG00000018318	NMD3	99	83.298	ENSSHAG00000016044	NMD3	100	82.704	Sarcophilus_harrisii
ENSCPBG00000018318	NMD3	99	82.489	ENSSFOG00015003609	nmd3	99	81.746	Scleropages_formosus
ENSCPBG00000018318	NMD3	100	80.632	ENSSMAG00000012887	nmd3	100	80.198	Scophthalmus_maximus
ENSCPBG00000018318	NMD3	99	82.700	ENSSDUG00000023721	nmd3	99	82.143	Seriola_dumerili
ENSCPBG00000018318	NMD3	99	83.122	ENSSLDG00000006565	nmd3	99	82.540	Seriola_lalandi_dorsalis
ENSCPBG00000018318	NMD3	100	83.966	ENSSARG00000010402	NMD3	100	84.049	Sorex_araneus
ENSCPBG00000018318	NMD3	99	91.583	ENSSPUG00000018791	NMD3	100	91.583	Sphenodon_punctatus
ENSCPBG00000018318	NMD3	99	83.333	ENSSPAG00000014328	nmd3	99	82.540	Stegastes_partitus
ENSCPBG00000018318	NMD3	99	85.011	ENSSSCG00000022952	NMD3	100	83.698	Sus_scrofa
ENSCPBG00000018318	NMD3	99	89.006	ENSTGUG00000011140	-	100	87.873	Taeniopygia_guttata
ENSCPBG00000018318	NMD3	97	86.768	ENSTGUG00000015141	-	100	86.768	Taeniopygia_guttata
ENSCPBG00000018318	NMD3	99	82.068	ENSTRUG00000005958	nmd3	99	81.349	Takifugu_rubripes
ENSCPBG00000018318	NMD3	99	60.835	ENSTBEG00000011783	-	100	60.835	Tupaia_belangeri
ENSCPBG00000018318	NMD3	99	80.550	ENSTTRG00000012938	NMD3	100	79.920	Tursiops_truncatus
ENSCPBG00000018318	NMD3	80	82.836	ENSUAMG00000009305	-	99	82.836	Ursus_americanus
ENSCPBG00000018318	NMD3	99	85.470	ENSUMAG00000011070	NMD3	99	84.306	Ursus_maritimus
ENSCPBG00000018318	NMD3	99	84.989	ENSVPAG00000008779	NMD3	100	84.095	Vicugna_pacos
ENSCPBG00000018318	NMD3	100	84.177	ENSVVUG00000023055	NMD3	100	82.937	Vulpes_vulpes
ENSCPBG00000018318	NMD3	100	87.342	ENSXETG00000027727	nmd3	100	87.103	Xenopus_tropicalis
ENSCPBG00000018318	NMD3	62	83.333	ENSXCOG00000012490	nmd3	82	84.146	Xiphophorus_couchianus
ENSCPBG00000018318	NMD3	99	81.857	ENSXMAG00000018406	nmd3	99	81.548	Xiphophorus_maculatus