EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000018335 (Gene tree)
Gene ID: 101953013
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 26728 bases
Position: chrKK083337.1:235257-261984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025820	Utp12	PF04003.12	3.2e-24	1	1
ENSCPBP00000025819	Utp12	PF04003.12	3.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000030416	-	3436	-	ENSCPBP00000025820	888 (aa)	-	-
ENSCPBT00000030413	-	3502	-	ENSCPBP00000025819	910 (aa)	XP_008174682	UPI00046C1837

Gene Model

Click here to download ENSCPBG00000018335's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018335's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018335	-	97	78.394	ENSG00000241945	PWP2	96	78.507	Homo_sapiens
ENSCPBG00000018335	-	97	74.183	ENSAPOG00000021522	pwp2h	97	74.183	Acanthochromis_polyacanthus
ENSCPBG00000018335	-	98	76.786	ENSAMEG00000010907	-	97	77.690	Ailuropoda_melanoleuca
ENSCPBG00000018335	-	97	73.371	ENSACIG00000024109	pwp2h	97	73.708	Amphilophus_citrinellus
ENSCPBG00000018335	-	97	74.153	ENSAOCG00000014853	pwp2h	97	74.266	Amphiprion_ocellaris
ENSCPBG00000018335	-	99	72.988	ENSAPEG00000008152	pwp2h	99	73.098	Amphiprion_percula
ENSCPBG00000018335	-	97	72.717	ENSATEG00000015493	pwp2h	100	73.618	Anabas_testudineus
ENSCPBG00000018335	-	99	87.168	ENSAPLG00000010371	-	98	86.947	Anas_platyrhynchos
ENSCPBG00000018335	-	99	84.158	ENSACAG00000017861	-	97	85.198	Anolis_carolinensis
ENSCPBG00000018335	-	97	78.016	ENSANAG00000034845	-	96	78.104	Aotus_nancymaae
ENSCPBG00000018335	-	97	73.348	ENSACLG00000011425	pwp2h	97	73.348	Astatotilapia_calliptera
ENSCPBG00000018335	-	98	71.460	ENSAMXG00000007988	pwp2h	96	71.619	Astyanax_mexicanus
ENSCPBG00000018335	-	98	77.716	ENSBTAG00000007105	-	96	77.728	Bos_taurus
ENSCPBG00000018335	-	96	38.565	WBGene00018891	F55F8.3	95	38.367	Caenorhabditis_elegans
ENSCPBG00000018335	-	97	78.555	ENSCJAG00000005570	-	96	78.959	Callithrix_jacchus
ENSCPBG00000018335	-	99	76.829	ENSCAFG00000010687	-	97	77.728	Canis_familiaris
ENSCPBG00000018335	-	82	76.070	ENSCAFG00020019199	-	87	77.143	Canis_lupus_dingo
ENSCPBG00000018335	-	97	73.543	ENSCHIG00000026362	-	96	73.326	Capra_hircus
ENSCPBG00000018335	-	99	78.271	ENSTSYG00000009022	-	96	79.275	Carlito_syrichta
ENSCPBG00000018335	-	98	76.897	ENSCAPG00000017934	-	96	78.157	Cavia_aperea
ENSCPBG00000018335	-	99	76.542	ENSCPOG00000023616	-	96	78.305	Cavia_porcellus
ENSCPBG00000018335	-	97	78.442	ENSCCAG00000034616	-	96	78.507	Cebus_capucinus
ENSCPBG00000018335	-	97	78.579	ENSCATG00000032550	-	96	78.846	Cercocebus_atys
ENSCPBG00000018335	-	99	76.718	ENSCLAG00000009503	-	97	77.966	Chinchilla_lanigera
ENSCPBG00000018335	-	97	78.354	ENSCSAG00000007903	-	96	78.620	Chlorocebus_sabaeus
ENSCPBG00000018335	-	98	57.143	ENSCSAVG00000004186	-	97	57.469	Ciona_savignyi
ENSCPBG00000018335	-	97	78.781	ENSCANG00000028013	-	96	78.935	Colobus_angolensis_palliatus
ENSCPBG00000018335	-	99	77.288	ENSCGRG00001020074	Pwp2	96	78.266	Cricetulus_griseus_chok1gshd
ENSCPBG00000018335	-	99	77.288	ENSCGRG00000003750	Pwp2	96	78.266	Cricetulus_griseus_crigri
ENSCPBG00000018335	-	97	72.881	ENSCSEG00000000861	pwp2h	97	72.881	Cynoglossus_semilaevis
ENSCPBG00000018335	-	99	72.185	ENSCVAG00000000996	pwp2h	97	73.363	Cyprinodon_variegatus
ENSCPBG00000018335	-	99	68.709	ENSDARG00000037109	pwp2h	96	69.556	Danio_rerio
ENSCPBG00000018335	-	85	75.742	ENSDNOG00000012128	-	97	76.172	Dasypus_novemcinctus
ENSCPBG00000018335	-	93	72.361	ENSDORG00000003015	Pwp2	92	72.976	Dipodomys_ordii
ENSCPBG00000018335	-	98	48.537	FBgn0033557	CG12325	94	49.667	Drosophila_melanogaster
ENSCPBG00000018335	-	85	66.923	ENSEBUG00000003140	pwp2h	95	66.881	Eptatretus_burgeri
ENSCPBG00000018335	-	98	78.436	ENSEASG00005001651	-	96	78.829	Equus_asinus_asinus
ENSCPBG00000018335	-	98	78.547	ENSECAG00000006090	-	96	78.941	Equus_caballus
ENSCPBG00000018335	-	99	73.216	ENSELUG00000001878	pwp2h	97	74.466	Esox_lucius
ENSCPBG00000018335	-	97	77.201	ENSFCAG00000004487	-	96	77.252	Felis_catus
ENSCPBG00000018335	-	99	85.762	ENSFALG00000012300	-	99	85.982	Ficedula_albicollis
ENSCPBG00000018335	-	98	76.562	ENSFDAG00000016140	-	96	77.537	Fukomys_damarensis
ENSCPBG00000018335	-	95	74.130	ENSFHEG00000009078	pwp2h	100	74.130	Fundulus_heteroclitus
ENSCPBG00000018335	-	97	72.582	ENSGMOG00000016522	pwp2h	96	72.841	Gadus_morhua
ENSCPBG00000018335	-	99	88.300	ENSGALG00000045726	-	99	87.748	Gallus_gallus
ENSCPBG00000018335	-	99	71.803	ENSGAFG00000011340	pwp2h	97	73.318	Gambusia_affinis
ENSCPBG00000018335	-	97	72.235	ENSGACG00000014928	pwp2h	99	71.377	Gasterosteus_aculeatus
ENSCPBG00000018335	-	100	97.253	ENSGAGG00000005377	-	100	97.253	Gopherus_agassizii
ENSCPBG00000018335	-	97	78.305	ENSGGOG00000041875	-	96	78.305	Gorilla_gorilla
ENSCPBG00000018335	-	97	73.572	ENSHBUG00000005530	pwp2h	97	73.572	Haplochromis_burtoni
ENSCPBG00000018335	-	98	76.708	ENSHGLG00000017401	-	97	77.237	Heterocephalus_glaber_female
ENSCPBG00000018335	-	98	76.319	ENSHGLG00100013888	-	97	76.844	Heterocephalus_glaber_male
ENSCPBG00000018335	-	97	71.106	ENSHCOG00000018121	pwp2h	95	71.509	Hippocampus_comes
ENSCPBG00000018335	-	99	70.601	ENSIPUG00000014074	pwp2h	97	71.318	Ictalurus_punctatus
ENSCPBG00000018335	-	99	77.519	ENSSTOG00000014194	-	96	78.870	Ictidomys_tridecemlineatus
ENSCPBG00000018335	-	99	76.855	ENSJJAG00000013039	Pwp2	96	78.054	Jaculus_jaculus
ENSCPBG00000018335	-	97	71.702	ENSKMAG00000003143	pwp2h	97	71.557	Kryptolebias_marmoratus
ENSCPBG00000018335	-	97	72.266	ENSLBEG00000006388	pwp2h	96	72.291	Labrus_bergylta
ENSCPBG00000018335	-	95	78.539	ENSLACG00000006084	pwp2h	97	79.741	Latimeria_chalumnae
ENSCPBG00000018335	-	98	74.442	ENSLOCG00000003663	pwp2h	96	74.775	Lepisosteus_oculatus
ENSCPBG00000018335	-	95	78.746	ENSLAFG00000003871	-	100	78.862	Loxodonta_africana
ENSCPBG00000018335	-	97	78.467	ENSMFAG00000044448	-	96	78.733	Macaca_fascicularis
ENSCPBG00000018335	-	97	78.467	ENSMMUG00000005271	PWP2	96	78.733	Macaca_mulatta
ENSCPBG00000018335	-	97	78.579	ENSMNEG00000030782	-	96	78.846	Macaca_nemestrina
ENSCPBG00000018335	-	97	78.733	ENSMLEG00000039860	-	96	78.846	Mandrillus_leucophaeus
ENSCPBG00000018335	-	97	74.295	ENSMAMG00000022327	pwp2h	97	74.157	Mastacembelus_armatus
ENSCPBG00000018335	-	97	73.236	ENSMZEG00005015448	pwp2h	97	73.236	Maylandia_zebra
ENSCPBG00000018335	-	99	76.821	ENSMGAG00000014596	-	98	76.821	Meleagris_gallopavo
ENSCPBG00000018335	-	91	51.168	ENSMAUG00000020265	Pwp2	88	53.271	Mesocricetus_auratus
ENSCPBG00000018335	-	99	77.437	ENSMICG00000001002	-	96	78.403	Microcebus_murinus
ENSCPBG00000018335	-	99	76.906	ENSMOCG00000003844	Pwp2	96	77.991	Microtus_ochrogaster
ENSCPBG00000018335	-	96	69.397	ENSMMOG00000000882	pwp2h	100	69.422	Mola_mola
ENSCPBG00000018335	-	99	79.912	ENSMODG00000021081	-	97	81.017	Monodelphis_domestica
ENSCPBG00000018335	-	99	73.203	ENSMALG00000000821	pwp2h	97	74.103	Monopterus_albus
ENSCPBG00000018335	-	99	76.718	MGP_CAROLIEiJ_G0015505	Pwp2	96	77.853	Mus_caroli
ENSCPBG00000018335	-	99	76.744	ENSMUSG00000032834	Pwp2	96	77.941	Mus_musculus
ENSCPBG00000018335	-	99	76.301	MGP_PahariEiJ_G0030918	Pwp2	96	77.489	Mus_pahari
ENSCPBG00000018335	-	99	76.855	MGP_SPRETEiJ_G0016318	Pwp2	96	78.054	Mus_spretus
ENSCPBG00000018335	-	84	76.893	ENSMPUG00000009936	-	96	77.445	Mustela_putorius_furo
ENSCPBG00000018335	-	99	72.475	ENSMLUG00000004823	-	96	72.912	Myotis_lucifugus
ENSCPBG00000018335	-	99	76.829	ENSNGAG00000021106	Pwp2	96	77.765	Nannospalax_galili
ENSCPBG00000018335	-	99	70.985	ENSNBRG00000016527	pwp2h	97	72.247	Neolamprologus_brichardi
ENSCPBG00000018335	-	97	78.281	ENSNLEG00000001928	-	99	78.394	Nomascus_leucogenys
ENSCPBG00000018335	-	99	76.582	ENSODEG00000013073	-	97	77.227	Octodon_degus
ENSCPBG00000018335	-	97	73.348	ENSONIG00000007136	pwp2h	97	73.348	Oreochromis_niloticus
ENSCPBG00000018335	-	98	78.396	ENSOANG00000006477	-	97	79.303	Ornithorhynchus_anatinus
ENSCPBG00000018335	-	98	72.260	ENSORLG00000000066	pwp2h	97	72.686	Oryzias_latipes
ENSCPBG00000018335	-	98	72.483	ENSORLG00020000321	pwp2h	97	72.912	Oryzias_latipes_hni
ENSCPBG00000018335	-	98	68.233	ENSORLG00015014731	pwp2h	97	68.623	Oryzias_latipes_hsok
ENSCPBG00000018335	-	69	72.045	ENSOMEG00000020671	pwp2h	98	57.548	Oryzias_melastigma
ENSCPBG00000018335	-	97	79.345	ENSOGAG00000012473	-	97	79.502	Otolemur_garnettii
ENSCPBG00000018335	-	97	75.478	ENSOARG00000011672	-	96	77.633	Ovis_aries
ENSCPBG00000018335	-	97	78.394	ENSPPAG00000037874	-	96	78.507	Pan_paniscus
ENSCPBG00000018335	-	97	77.540	ENSPPRG00000011088	-	96	77.790	Panthera_pardus
ENSCPBG00000018335	-	97	70.169	ENSPTIG00000020872	-	96	70.136	Panthera_tigris_altaica
ENSCPBG00000018335	-	97	78.394	ENSPTRG00000013969	-	96	78.507	Pan_troglodytes
ENSCPBG00000018335	-	97	78.467	ENSPANG00000006267	-	96	78.733	Papio_anubis
ENSCPBG00000018335	-	99	71.082	ENSPKIG00000002693	pwp2h	100	74.508	Paramormyrops_kingsleyae
ENSCPBG00000018335	-	100	94.286	ENSPSIG00000009783	-	100	94.937	Pelodiscus_sinensis
ENSCPBG00000018335	-	97	73.529	ENSPMGG00000022349	pwp2h	97	73.476	Periophthalmus_magnuspinnatus
ENSCPBG00000018335	-	97	77.953	ENSPEMG00000009968	Pwp2	96	78.442	Peromyscus_maniculatus_bairdii
ENSCPBG00000018335	-	99	80.375	ENSPCIG00000014548	-	97	81.377	Phascolarctos_cinereus
ENSCPBG00000018335	-	99	72.009	ENSPFOG00000014764	pwp2h	97	72.982	Poecilia_formosa
ENSCPBG00000018335	-	99	71.899	ENSPLAG00000011559	pwp2h	97	72.870	Poecilia_latipinna
ENSCPBG00000018335	-	99	72.009	ENSPMEG00000021347	pwp2h	97	73.094	Poecilia_mexicana
ENSCPBG00000018335	-	99	71.789	ENSPREG00000015887	pwp2h	97	73.206	Poecilia_reticulata
ENSCPBG00000018335	-	97	78.709	ENSPPYG00000011478	-	96	78.822	Pongo_abelii
ENSCPBG00000018335	-	99	74.556	ENSPCAG00000004676	-	96	75.028	Procavia_capensis
ENSCPBG00000018335	-	97	78.129	ENSPCOG00000012856	-	96	78.442	Propithecus_coquereli
ENSCPBG00000018335	-	99	70.843	ENSPVAG00000002312	-	97	71.076	Pteropus_vampyrus
ENSCPBG00000018335	-	75	71.201	ENSPNYG00000008379	pwp2h	95	71.201	Pundamilia_nyererei
ENSCPBG00000018335	-	99	71.475	ENSPNAG00000017876	pwp2h	96	72.575	Pygocentrus_nattereri
ENSCPBG00000018335	-	99	76.354	ENSRNOG00000001210	Pwp2	96	77.540	Rattus_norvegicus
ENSCPBG00000018335	-	97	78.330	ENSRBIG00000034365	-	96	78.482	Rhinopithecus_bieti
ENSCPBG00000018335	-	97	78.442	ENSRROG00000031946	-	96	78.596	Rhinopithecus_roxellana
ENSCPBG00000018335	-	96	43.842	YCR057C	PWP2	92	44.407	Saccharomyces_cerevisiae
ENSCPBG00000018335	-	97	78.005	ENSSBOG00000034554	-	96	78.068	Saimiri_boliviensis_boliviensis
ENSCPBG00000018335	-	99	73.684	ENSSFOG00015003316	pwp2	97	75.056	Scleropages_formosus
ENSCPBG00000018335	-	97	73.273	ENSSMAG00000011839	pwp2h	96	73.220	Scophthalmus_maximus
ENSCPBG00000018335	-	97	73.672	ENSSDUG00000011462	pwp2h	96	73.672	Seriola_dumerili
ENSCPBG00000018335	-	97	74.041	ENSSLDG00000008651	pwp2h	96	73.879	Seriola_lalandi_dorsalis
ENSCPBG00000018335	-	99	89.310	ENSSPUG00000002980	-	99	89.944	Sphenodon_punctatus
ENSCPBG00000018335	-	97	73.684	ENSSPAG00000023368	pwp2h	97	73.962	Stegastes_partitus
ENSCPBG00000018335	-	99	76.000	ENSSSCG00000029627	-	96	76.723	Sus_scrofa
ENSCPBG00000018335	-	61	79.964	ENSTGUG00000018216	-	99	79.964	Taeniopygia_guttata
ENSCPBG00000018335	-	97	86.523	ENSTGUG00000005996	-	100	86.750	Taeniopygia_guttata
ENSCPBG00000018335	-	99	70.699	ENSTRUG00000013258	pwp2h	97	71.412	Takifugu_rubripes
ENSCPBG00000018335	-	100	69.121	ENSTNIG00000010613	pwp2h	97	70.282	Tetraodon_nigroviridis
ENSCPBG00000018335	-	81	78.220	ENSTBEG00000015597	-	86	78.409	Tupaia_belangeri
ENSCPBG00000018335	-	95	77.326	ENSTTRG00000006728	-	100	77.326	Tursiops_truncatus
ENSCPBG00000018335	-	97	77.165	ENSUAMG00000019031	-	98	77.432	Ursus_americanus
ENSCPBG00000018335	-	97	74.548	ENSUMAG00000025481	-	96	74.634	Ursus_maritimus
ENSCPBG00000018335	-	99	75.942	ENSVVUG00000024125	-	96	76.828	Vulpes_vulpes
ENSCPBG00000018335	-	67	62.130	ENSXETG00000018002	pwp2	86	62.130	Xenopus_tropicalis
ENSCPBG00000018335	-	99	67.947	ENSXCOG00000020474	pwp2h	97	69.291	Xiphophorus_couchianus
ENSCPBG00000018335	-	99	72.106	ENSXMAG00000008124	pwp2h	97	72.758	Xiphophorus_maculatus