EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000018802 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5354 bases
Position: chrKK088236.1:11294639-11299992
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000026465	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000031183	-	441	-	ENSCPBP00000026465	146 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000018802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000018802	-	86	33.858	ENSCPBG00000027605	RAB33B	56	33.858
ENSCPBG00000018802	-	85	32.000	ENSCPBG00000009941	RAB14	52	30.973
ENSCPBG00000018802	-	87	37.500	ENSCPBG00000000041	RAB6A	61	37.500
ENSCPBG00000018802	-	85	33.333	ENSCPBG00000011236	-	53	33.628
ENSCPBG00000018802	-	89	34.328	ENSCPBG00000001542	RAB9B	61	30.894
ENSCPBG00000018802	-	85	35.200	ENSCPBG00000012712	RAB5B	52	33.929
ENSCPBG00000018802	-	86	34.127	ENSCPBG00000027619	-	56	33.043
ENSCPBG00000018802	-	94	31.884	ENSCPBG00000016907	RAB15	59	30.952
ENSCPBG00000018802	-	96	50.000	ENSCPBG00000013941	-	74	50.000
ENSCPBG00000018802	-	95	47.826	ENSCPBG00000022721	RRAS2	62	46.400
ENSCPBG00000018802	-	89	33.582	ENSCPBG00000014343	RAB7A	59	30.894
ENSCPBG00000018802	-	87	36.719	ENSCPBG00000014340	RAB41	60	36.719
ENSCPBG00000018802	-	87	42.520	ENSCPBG00000028244	RERG	57	42.105
ENSCPBG00000018802	-	96	31.690	ENSCPBG00000011245	RAB42	67	31.690
ENSCPBG00000018802	-	94	32.609	ENSCPBG00000023254	RAB2A	59	31.746
ENSCPBG00000018802	-	84	35.484	ENSCPBG00000012631	RAB35	54	34.821
ENSCPBG00000018802	-	94	32.609	ENSCPBG00000012691	RAB2B	58	31.746
ENSCPBG00000018802	-	88	49.612	ENSCPBG00000013681	MRAS	60	47.009
ENSCPBG00000018802	-	92	32.609	ENSCPBG00000023927	RAB22A	69	32.609
ENSCPBG00000018802	-	90	32.331	ENSCPBG00000015839	-	59	31.148
ENSCPBG00000018802	-	90	33.835	ENSCPBG00000022559	RAB5A	55	32.500
ENSCPBG00000018802	-	92	37.681	ENSCPBG00000018286	RHEB	69	37.008
ENSCPBG00000018802	-	88	33.846	ENSCPBG00000012042	RAB33A	51	33.846
ENSCPBG00000018802	-	96	31.469	ENSCPBG00000001057	RAB39B	60	32.031
ENSCPBG00000018802	-	84	30.645	ENSCPBG00000011914	RAB19	52	30.357
ENSCPBG00000018802	-	96	48.571	ENSCPBG00000015094	-	75	48.571
ENSCPBG00000018802	-	94	34.058	ENSCPBG00000022446	RAB1B	62	33.333
ENSCPBG00000018802	-	87	35.938	ENSCPBG00000021406	RAB6B	62	35.938
ENSCPBG00000018802	-	86	36.434	ENSCPBG00000006855	RAB30	56	35.043
ENSCPBG00000018802	-	96	49.286	ENSCPBG00000016544	NRAS	74	49.286
ENSCPBG00000018802	-	98	49.650	ENSCPBG00000009289	-	74	50.714
ENSCPBG00000018802	-	92	33.987	ENSCPBG00000027825	RASL10B	69	32.168
ENSCPBG00000018802	-	92	37.410	ENSCPBG00000016033	RAB9A	58	34.375
ENSCPBG00000018802	-	94	34.783	ENSCPBG00000013243	RAB1A	61	34.127

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018802	-	91	93.985	ENSCSEG00000015746	-	92	93.985	Cynoglossus_semilaevis
ENSCPBG00000018802	-	97	90.141	ENSMMOG00000018992	-	100	90.141	Mola_mola
ENSCPBG00000018802	-	97	89.437	ENSMALG00000015576	-	100	89.437	Monopterus_albus
ENSCPBG00000018802	-	97	88.811	ENSSDUG00000017824	-	100	88.811	Seriola_dumerili
ENSCPBG00000018802	-	97	88.811	ENSSLDG00000014472	-	100	88.811	Seriola_lalandi_dorsalis