EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000018899 (Gene tree)
Gene ID: 101939535
Gene Symbol: SCRT1
Alias: DKFZp547F072|ZNF898
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 2798 bases
Position: chrKK088237.1:970726-973523
Accession: 15950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000026613	zf-C2H2	PF00096.26	2.9e-25	1	4
ENSCPBP00000026613	zf-C2H2	PF00096.26	2.9e-25	2	4
ENSCPBP00000026613	zf-C2H2	PF00096.26	2.9e-25	3	4
ENSCPBP00000026613	zf-C2H2	PF00096.26	2.9e-25	4	4
ENSCPBP00000026613	zf-met	PF12874.7	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000031355	SCRT1-201	1531	-	ENSCPBP00000026613	279 (aa)	XP_005291189	UPI000388B9B0

Gene Model

Click here to download ENSCPBG00000018899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000018899	SCRT1	95	41.818	ENSCPBG00000020255	SNAI2	99	40.345
ENSCPBG00000018899	SCRT1	86	63.600	ENSCPBG00000027613	SCRT2	100	63.600
ENSCPBG00000018899	SCRT1	51	53.846	ENSCPBG00000023474	SNAI3	51	53.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018899	SCRT1	97	68.231	ENSAPOG00000003680	scrt2	97	68.231	Acanthochromis_polyacanthus
ENSCPBG00000018899	SCRT1	99	85.000	ENSAPOG00000009279	scrt1b	99	85.000	Acanthochromis_polyacanthus
ENSCPBG00000018899	SCRT1	99	77.113	ENSAPOG00000015197	-	99	77.113	Acanthochromis_polyacanthus
ENSCPBG00000018899	SCRT1	99	75.839	ENSACIG00000006586	-	99	75.839	Amphilophus_citrinellus
ENSCPBG00000018899	SCRT1	99	82.143	ENSACIG00000013613	scrt1b	99	82.143	Amphilophus_citrinellus
ENSCPBG00000018899	SCRT1	97	67.148	ENSACIG00000012604	scrt2	97	67.148	Amphilophus_citrinellus
ENSCPBG00000018899	SCRT1	96	58.140	ENSACIG00000001296	-	96	58.140	Amphilophus_citrinellus
ENSCPBG00000018899	SCRT1	99	85.000	ENSAOCG00000003910	scrt1b	99	85.000	Amphiprion_ocellaris
ENSCPBG00000018899	SCRT1	97	68.231	ENSAOCG00000021557	scrt2	97	68.231	Amphiprion_ocellaris
ENSCPBG00000018899	SCRT1	99	76.510	ENSAOCG00000023304	-	99	76.510	Amphiprion_ocellaris
ENSCPBG00000018899	SCRT1	99	84.643	ENSAPEG00000000869	scrt1b	99	84.643	Amphiprion_percula
ENSCPBG00000018899	SCRT1	99	76.510	ENSAPEG00000005677	-	99	76.510	Amphiprion_percula
ENSCPBG00000018899	SCRT1	97	68.231	ENSAPEG00000022558	scrt2	97	68.231	Amphiprion_percula
ENSCPBG00000018899	SCRT1	99	85.357	ENSATEG00000002302	scrt1b	99	85.357	Anabas_testudineus
ENSCPBG00000018899	SCRT1	99	76.408	ENSATEG00000011660	-	99	76.408	Anabas_testudineus
ENSCPBG00000018899	SCRT1	96	53.526	ENSATEG00000003195	-	97	53.526	Anabas_testudineus
ENSCPBG00000018899	SCRT1	97	65.161	ENSATEG00000023998	scrt2	97	64.839	Anabas_testudineus
ENSCPBG00000018899	SCRT1	77	75.701	ENSACAG00000016109	SCRT2	95	75.701	Anolis_carolinensis
ENSCPBG00000018899	SCRT1	99	83.929	ENSACLG00000007162	scrt1b	99	83.929	Astatotilapia_calliptera
ENSCPBG00000018899	SCRT1	99	73.422	ENSACLG00000012046	-	99	73.422	Astatotilapia_calliptera
ENSCPBG00000018899	SCRT1	98	83.333	ENSAMXG00000042624	SCRT1	99	83.333	Astyanax_mexicanus
ENSCPBG00000018899	SCRT1	88	70.703	ENSAMXG00000034158	scrt2	92	70.703	Astyanax_mexicanus
ENSCPBG00000018899	SCRT1	99	86.691	ENSAMXG00000038085	scrt1a	99	86.691	Astyanax_mexicanus
ENSCPBG00000018899	SCRT1	58	61.728	WBGene00000468	ces-1	60	60.976	Caenorhabditis_elegans
ENSCPBG00000018899	SCRT1	97	64.935	ENSCSEG00000021542	scrt2	97	65.789	Cynoglossus_semilaevis
ENSCPBG00000018899	SCRT1	99	83.571	ENSCSEG00000008596	scrt1b	99	83.571	Cynoglossus_semilaevis
ENSCPBG00000018899	SCRT1	99	75.676	ENSCSEG00000014892	-	99	75.676	Cynoglossus_semilaevis
ENSCPBG00000018899	SCRT1	99	83.929	ENSCVAG00000009561	scrt1b	99	83.929	Cyprinodon_variegatus
ENSCPBG00000018899	SCRT1	97	64.516	ENSCVAG00000021038	scrt2	97	64.516	Cyprinodon_variegatus
ENSCPBG00000018899	SCRT1	99	75.503	ENSCVAG00000003190	-	99	75.503	Cyprinodon_variegatus
ENSCPBG00000018899	SCRT1	99	86.691	ENSDARG00000040214	scrt1b	99	86.691	Danio_rerio
ENSCPBG00000018899	SCRT1	100	86.380	ENSDARG00000100821	scrt1a	100	86.380	Danio_rerio
ENSCPBG00000018899	SCRT1	99	87.681	ENSELUG00000005435	scrt1b	99	87.681	Esox_lucius
ENSCPBG00000018899	SCRT1	97	64.217	ENSELUG00000023883	scrt2	96	63.578	Esox_lucius
ENSCPBG00000018899	SCRT1	99	84.532	ENSELUG00000022228	scrt1a	99	84.532	Esox_lucius
ENSCPBG00000018899	SCRT1	83	71.245	ENSFALG00000005718	SCRT2	97	71.245	Ficedula_albicollis
ENSCPBG00000018899	SCRT1	97	61.993	ENSFDAG00000008733	SCRT1	98	62.500	Fukomys_damarensis
ENSCPBG00000018899	SCRT1	99	75.503	ENSFHEG00000009794	-	99	75.503	Fundulus_heteroclitus
ENSCPBG00000018899	SCRT1	99	83.214	ENSFHEG00000014820	scrt1b	99	83.214	Fundulus_heteroclitus
ENSCPBG00000018899	SCRT1	97	70.397	ENSFHEG00000005732	scrt2	97	70.397	Fundulus_heteroclitus
ENSCPBG00000018899	SCRT1	99	83.154	ENSGMOG00000000629	scrt1b	99	83.154	Gadus_morhua
ENSCPBG00000018899	SCRT1	57	92.742	ENSGMOG00000013833	-	54	92.742	Gadus_morhua
ENSCPBG00000018899	SCRT1	97	60.323	ENSGMOG00000019519	scrt2	96	60.323	Gadus_morhua
ENSCPBG00000018899	SCRT1	97	64.469	ENSGALG00000028912	SCRT2	97	64.388	Gallus_gallus
ENSCPBG00000018899	SCRT1	97	67.114	ENSGAFG00000003093	scrt2	97	67.114	Gambusia_affinis
ENSCPBG00000018899	SCRT1	99	75.972	ENSGAFG00000009650	-	99	75.972	Gambusia_affinis
ENSCPBG00000018899	SCRT1	99	83.571	ENSGAFG00000007636	scrt1b	99	83.571	Gambusia_affinis
ENSCPBG00000018899	SCRT1	99	80.576	ENSGACG00000008982	scrt1b	99	80.576	Gasterosteus_aculeatus
ENSCPBG00000018899	SCRT1	99	74.490	ENSGACG00000004072	-	99	74.490	Gasterosteus_aculeatus
ENSCPBG00000018899	SCRT1	99	96.014	ENSGAGG00000011736	SCRT1	100	96.014	Gopherus_agassizii
ENSCPBG00000018899	SCRT1	77	70.093	ENSGAGG00000020760	-	79	70.093	Gopherus_agassizii
ENSCPBG00000018899	SCRT1	96	66.912	ENSGAGG00000020761	SCRT2	96	66.912	Gopherus_agassizii
ENSCPBG00000018899	SCRT1	99	83.929	ENSHBUG00000016621	scrt1b	99	83.929	Haplochromis_burtoni
ENSCPBG00000018899	SCRT1	97	68.231	ENSHBUG00000012492	scrt2	97	68.231	Haplochromis_burtoni
ENSCPBG00000018899	SCRT1	99	75.839	ENSHBUG00000019101	-	99	75.839	Haplochromis_burtoni
ENSCPBG00000018899	SCRT1	99	82.857	ENSHCOG00000016704	scrt1b	99	82.857	Hippocampus_comes
ENSCPBG00000018899	SCRT1	99	70.690	ENSHCOG00000016179	-	99	70.690	Hippocampus_comes
ENSCPBG00000018899	SCRT1	97	65.646	ENSHCOG00000008116	scrt2	97	65.646	Hippocampus_comes
ENSCPBG00000018899	SCRT1	99	86.331	ENSIPUG00000004551	scrt1a	99	86.331	Ictalurus_punctatus
ENSCPBG00000018899	SCRT1	98	78.102	ENSIPUG00000005547	-	99	78.102	Ictalurus_punctatus
ENSCPBG00000018899	SCRT1	51	83.688	ENSSTOG00000032944	SCRT2	80	82.550	Ictidomys_tridecemlineatus
ENSCPBG00000018899	SCRT1	99	83.571	ENSKMAG00000005484	scrt1b	99	83.571	Kryptolebias_marmoratus
ENSCPBG00000018899	SCRT1	99	73.244	ENSKMAG00000009489	-	99	75.251	Kryptolebias_marmoratus
ENSCPBG00000018899	SCRT1	97	64.516	ENSKMAG00000018087	scrt2	97	64.516	Kryptolebias_marmoratus
ENSCPBG00000018899	SCRT1	99	75.084	ENSLBEG00000023388	-	99	75.758	Labrus_bergylta
ENSCPBG00000018899	SCRT1	97	63.666	ENSLBEG00000015419	scrt2	97	64.309	Labrus_bergylta
ENSCPBG00000018899	SCRT1	99	88.849	ENSLACG00000003588	SCRT1	99	88.849	Latimeria_chalumnae
ENSCPBG00000018899	SCRT1	97	54.341	ENSLOCG00000002246	scrt2	97	54.341	Lepisosteus_oculatus
ENSCPBG00000018899	SCRT1	99	89.209	ENSLOCG00000007573	scrt1b	99	89.209	Lepisosteus_oculatus
ENSCPBG00000018899	SCRT1	62	92.593	ENSMFAG00000035496	SCRT1	100	56.794	Macaca_fascicularis
ENSCPBG00000018899	SCRT1	99	84.643	ENSMAMG00000011698	scrt1b	99	84.643	Mastacembelus_armatus
ENSCPBG00000018899	SCRT1	97	64.516	ENSMAMG00000001291	scrt2	97	65.161	Mastacembelus_armatus
ENSCPBG00000018899	SCRT1	97	68.231	ENSMZEG00005026445	scrt2	97	68.231	Maylandia_zebra
ENSCPBG00000018899	SCRT1	99	75.839	ENSMZEG00005026702	-	99	75.839	Maylandia_zebra
ENSCPBG00000018899	SCRT1	99	83.929	ENSMZEG00005005627	scrt1b	99	83.929	Maylandia_zebra
ENSCPBG00000018899	SCRT1	83	70.259	ENSMGAG00000016579	SCRT2	97	70.259	Meleagris_gallopavo
ENSCPBG00000018899	SCRT1	99	82.857	ENSMMOG00000003327	scrt1b	99	82.857	Mola_mola
ENSCPBG00000018899	SCRT1	97	64.821	ENSMMOG00000009272	scrt2	97	65.472	Mola_mola
ENSCPBG00000018899	SCRT1	99	75.503	ENSMMOG00000018345	-	99	75.503	Mola_mola
ENSCPBG00000018899	SCRT1	99	85.000	ENSMALG00000012704	scrt1b	99	85.000	Monopterus_albus
ENSCPBG00000018899	SCRT1	97	66.784	ENSMALG00000013656	scrt2	97	66.784	Monopterus_albus
ENSCPBG00000018899	SCRT1	51	83.688	ENSNGAG00000020815	Scrt2	71	82.877	Nannospalax_galili
ENSCPBG00000018899	SCRT1	99	80.496	ENSNBRG00000013983	scrt1b	99	80.496	Neolamprologus_brichardi
ENSCPBG00000018899	SCRT1	99	75.503	ENSNBRG00000014882	-	99	75.503	Neolamprologus_brichardi
ENSCPBG00000018899	SCRT1	97	67.870	ENSNBRG00000007221	scrt2	97	67.870	Neolamprologus_brichardi
ENSCPBG00000018899	SCRT1	99	83.571	ENSONIG00000006007	scrt1b	99	83.571	Oreochromis_niloticus
ENSCPBG00000018899	SCRT1	97	72.549	ENSONIG00000019809	-	100	72.549	Oreochromis_niloticus
ENSCPBG00000018899	SCRT1	97	64.516	ENSONIG00000016758	scrt2	97	64.839	Oreochromis_niloticus
ENSCPBG00000018899	SCRT1	96	61.594	ENSONIG00000003152	-	96	61.594	Oreochromis_niloticus
ENSCPBG00000018899	SCRT1	99	72.333	ENSORLG00000022825	-	99	72.333	Oryzias_latipes
ENSCPBG00000018899	SCRT1	99	84.286	ENSORLG00000025651	scrt1b	99	84.286	Oryzias_latipes
ENSCPBG00000018899	SCRT1	97	65.049	ENSORLG00000024051	scrt2	97	65.049	Oryzias_latipes
ENSCPBG00000018899	SCRT1	97	65.049	ENSORLG00020011478	scrt2	97	65.049	Oryzias_latipes_hni
ENSCPBG00000018899	SCRT1	99	84.286	ENSORLG00020012967	scrt1b	99	84.286	Oryzias_latipes_hni
ENSCPBG00000018899	SCRT1	99	72.000	ENSORLG00015010104	-	99	72.000	Oryzias_latipes_hsok
ENSCPBG00000018899	SCRT1	97	65.049	ENSORLG00015005524	scrt2	97	65.049	Oryzias_latipes_hsok
ENSCPBG00000018899	SCRT1	99	84.286	ENSORLG00015019165	scrt1b	99	84.286	Oryzias_latipes_hsok
ENSCPBG00000018899	SCRT1	99	84.286	ENSOMEG00000003925	scrt1b	99	84.286	Oryzias_melastigma
ENSCPBG00000018899	SCRT1	99	76.174	ENSOMEG00000000286	-	99	76.174	Oryzias_melastigma
ENSCPBG00000018899	SCRT1	97	65.372	ENSOMEG00000002661	scrt2	97	65.372	Oryzias_melastigma
ENSCPBG00000018899	SCRT1	99	88.489	ENSPKIG00000022303	SCRT1	99	88.489	Paramormyrops_kingsleyae
ENSCPBG00000018899	SCRT1	99	87.050	ENSPKIG00000020085	scrt1a	99	87.050	Paramormyrops_kingsleyae
ENSCPBG00000018899	SCRT1	97	71.841	ENSPMGG00000016561	scrt2	97	71.841	Periophthalmus_magnuspinnatus
ENSCPBG00000018899	SCRT1	99	81.720	ENSPMGG00000002260	scrt1b	99	81.720	Periophthalmus_magnuspinnatus
ENSCPBG00000018899	SCRT1	99	73.826	ENSPMGG00000021402	-	99	73.826	Periophthalmus_magnuspinnatus
ENSCPBG00000018899	SCRT1	97	64.839	ENSPFOG00000007738	scrt2	97	64.839	Poecilia_formosa
ENSCPBG00000018899	SCRT1	99	83.571	ENSPFOG00000017719	scrt1b	99	83.571	Poecilia_formosa
ENSCPBG00000018899	SCRT1	99	76.094	ENSPFOG00000005616	-	99	76.094	Poecilia_formosa
ENSCPBG00000018899	SCRT1	99	76.094	ENSPLAG00000011718	-	99	76.094	Poecilia_latipinna
ENSCPBG00000018899	SCRT1	99	83.571	ENSPLAG00000009876	scrt1b	99	83.571	Poecilia_latipinna
ENSCPBG00000018899	SCRT1	97	70.609	ENSPLAG00000005765	scrt2	97	70.609	Poecilia_latipinna
ENSCPBG00000018899	SCRT1	97	70.609	ENSPMEG00000001538	scrt2	97	70.609	Poecilia_mexicana
ENSCPBG00000018899	SCRT1	99	76.094	ENSPMEG00000011706	-	99	76.094	Poecilia_mexicana
ENSCPBG00000018899	SCRT1	99	83.571	ENSPMEG00000013274	scrt1b	99	83.571	Poecilia_mexicana
ENSCPBG00000018899	SCRT1	99	83.571	ENSPREG00000018985	scrt1b	99	83.571	Poecilia_reticulata
ENSCPBG00000018899	SCRT1	99	75.421	ENSPREG00000012166	-	99	75.421	Poecilia_reticulata
ENSCPBG00000018899	SCRT1	97	64.839	ENSPREG00000001147	scrt2	97	64.839	Poecilia_reticulata
ENSCPBG00000018899	SCRT1	99	83.929	ENSPNYG00000017733	scrt1b	99	83.929	Pundamilia_nyererei
ENSCPBG00000018899	SCRT1	99	75.839	ENSPNYG00000008865	-	99	75.839	Pundamilia_nyererei
ENSCPBG00000018899	SCRT1	97	68.231	ENSPNYG00000013109	scrt2	97	68.231	Pundamilia_nyererei
ENSCPBG00000018899	SCRT1	99	88.129	ENSPNAG00000017415	scrt1a	99	88.129	Pygocentrus_nattereri
ENSCPBG00000018899	SCRT1	98	83.273	ENSPNAG00000027880	-	99	83.273	Pygocentrus_nattereri
ENSCPBG00000018899	SCRT1	99	87.770	ENSSFOG00015001195	SCRT1	99	87.770	Scleropages_formosus
ENSCPBG00000018899	SCRT1	99	83.929	ENSSMAG00000019207	scrt1b	99	83.929	Scophthalmus_maximus
ENSCPBG00000018899	SCRT1	99	74.333	ENSSMAG00000005122	-	99	74.333	Scophthalmus_maximus
ENSCPBG00000018899	SCRT1	98	65.320	ENSSDUG00000001637	scrt2	96	65.657	Seriola_dumerili
ENSCPBG00000018899	SCRT1	99	84.643	ENSSDUG00000007752	scrt1b	99	84.643	Seriola_dumerili
ENSCPBG00000018899	SCRT1	99	76.174	ENSSDUG00000013215	-	99	76.174	Seriola_dumerili
ENSCPBG00000018899	SCRT1	99	84.643	ENSSLDG00000017166	scrt1b	99	84.643	Seriola_lalandi_dorsalis
ENSCPBG00000018899	SCRT1	99	76.174	ENSSLDG00000016454	-	99	76.174	Seriola_lalandi_dorsalis
ENSCPBG00000018899	SCRT1	97	64.516	ENSSLDG00000013565	scrt2	97	64.839	Seriola_lalandi_dorsalis
ENSCPBG00000018899	SCRT1	97	67.159	ENSSPUG00000018637	SCRT2	97	67.159	Sphenodon_punctatus
ENSCPBG00000018899	SCRT1	99	84.643	ENSSPAG00000002200	scrt1b	99	84.643	Stegastes_partitus
ENSCPBG00000018899	SCRT1	97	68.592	ENSSPAG00000014018	scrt2	97	68.592	Stegastes_partitus
ENSCPBG00000018899	SCRT1	99	74.161	ENSSPAG00000006788	-	99	76.174	Stegastes_partitus
ENSCPBG00000018899	SCRT1	83	71.121	ENSTGUG00000006801	SCRT2	99	71.121	Taeniopygia_guttata
ENSCPBG00000018899	SCRT1	99	76.094	ENSTRUG00000012719	-	99	76.094	Takifugu_rubripes
ENSCPBG00000018899	SCRT1	86	76.955	ENSTRUG00000019558	-	81	76.955	Takifugu_rubripes
ENSCPBG00000018899	SCRT1	98	83.333	ENSTRUG00000011637	scrt1b	99	83.333	Takifugu_rubripes
ENSCPBG00000018899	SCRT1	97	65.979	ENSTRUG00000007620	scrt2	97	65.979	Takifugu_rubripes
ENSCPBG00000018899	SCRT1	99	82.857	ENSTNIG00000018384	scrt1b	99	82.857	Tetraodon_nigroviridis
ENSCPBG00000018899	SCRT1	97	69.286	ENSTNIG00000012473	scrt2	97	69.286	Tetraodon_nigroviridis
ENSCPBG00000018899	SCRT1	99	83.571	ENSXCOG00000019675	scrt1b	99	83.571	Xiphophorus_couchianus
ENSCPBG00000018899	SCRT1	97	67.114	ENSXCOG00000014367	scrt2	97	67.114	Xiphophorus_couchianus
ENSCPBG00000018899	SCRT1	99	75.265	ENSXCOG00000019861	-	99	75.265	Xiphophorus_couchianus
ENSCPBG00000018899	SCRT1	99	76.094	ENSXMAG00000015353	-	99	76.094	Xiphophorus_maculatus
ENSCPBG00000018899	SCRT1	99	83.571	ENSXMAG00000027885	scrt1b	99	83.571	Xiphophorus_maculatus
ENSCPBG00000018899	SCRT1	97	64.839	ENSXMAG00000028567	scrt2	97	64.839	Xiphophorus_maculatus