EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000019062 (Gene tree)
Gene ID: 101937668
Gene Symbol: REXO5
Alias: NEF-sp
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 30648 bases
Position: chrKK088234.1:674075-704722
Accession: 24661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000026859	RRM_1	PF00076.22	2.7e-19	1	2
ENSCPBP00000026859	RRM_1	PF00076.22	2.7e-19	2	2
ENSCPBP00000026859	RNase_T	PF00929.24	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000031635	REXO5-201	2854	-	ENSCPBP00000026859	788 (aa)	XP_008162845	UPI000388F1FC

Gene Model

Click here to download ENSCPBG00000019062's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019062	REXO5	94	49.601	ENSG00000005189	REXO5	97	66.667	Homo_sapiens
ENSCPBG00000019062	REXO5	93	36.273	ENSAPOG00000008514	REXO5	97	35.851	Acanthochromis_polyacanthus
ENSCPBG00000019062	REXO5	98	49.431	ENSAMEG00000006178	REXO5	98	49.431	Ailuropoda_melanoleuca
ENSCPBG00000019062	REXO5	93	37.468	ENSAPEG00000010627	REXO5	94	37.468	Amphiprion_percula
ENSCPBG00000019062	REXO5	69	40.516	ENSATEG00000004682	REXO5	96	39.841	Anabas_testudineus
ENSCPBG00000019062	REXO5	94	69.689	ENSAPLG00000015740	REXO5	100	69.689	Anas_platyrhynchos
ENSCPBG00000019062	REXO5	99	55.314	ENSACAG00000009744	REXO5	99	55.314	Anolis_carolinensis
ENSCPBG00000019062	REXO5	98	47.187	ENSANAG00000034379	REXO5	97	47.187	Aotus_nancymaae
ENSCPBG00000019062	REXO5	77	35.843	ENSACLG00000004778	REXO5	99	35.241	Astatotilapia_calliptera
ENSCPBG00000019062	REXO5	98	48.542	ENSBTAG00000006449	REXO5	96	48.542	Bos_taurus
ENSCPBG00000019062	REXO5	98	45.960	ENSCJAG00000009363	REXO5	97	47.950	Callithrix_jacchus
ENSCPBG00000019062	REXO5	98	49.361	ENSCAFG00000017924	REXO5	99	50.604	Canis_familiaris
ENSCPBG00000019062	REXO5	98	47.954	ENSCAFG00020021846	REXO5	98	47.954	Canis_lupus_dingo
ENSCPBG00000019062	REXO5	99	48.936	ENSCHIG00000022443	REXO5	99	48.936	Capra_hircus
ENSCPBG00000019062	REXO5	98	45.641	ENSCPOG00000008940	REXO5	92	49.064	Cavia_porcellus
ENSCPBG00000019062	REXO5	98	47.788	ENSCCAG00000034936	REXO5	97	47.788	Cebus_capucinus
ENSCPBG00000019062	REXO5	98	48.656	ENSCATG00000044063	REXO5	97	48.656	Cercocebus_atys
ENSCPBG00000019062	REXO5	98	46.292	ENSCLAG00000008033	REXO5	92	46.292	Chinchilla_lanigera
ENSCPBG00000019062	REXO5	98	49.103	ENSCSAG00000007562	REXO5	97	49.103	Chlorocebus_sabaeus
ENSCPBG00000019062	REXO5	60	59.740	ENSCHOG00000009146	-	63	59.740	Choloepus_hoffmanni
ENSCPBG00000019062	REXO5	98	48.590	ENSCANG00000035776	REXO5	97	48.590	Colobus_angolensis_palliatus
ENSCPBG00000019062	REXO5	97	46.242	ENSCGRG00001016179	-	99	46.242	Cricetulus_griseus_chok1gshd
ENSCPBG00000019062	REXO5	97	46.242	ENSCGRG00000010868	-	96	49.842	Cricetulus_griseus_crigri
ENSCPBG00000019062	REXO5	94	49.200	ENSEASG00005007266	REXO5	98	53.017	Equus_asinus_asinus
ENSCPBG00000019062	REXO5	98	47.848	ENSECAG00000018769	REXO5	87	47.848	Equus_caballus
ENSCPBG00000019062	REXO5	83	56.812	ENSEEUG00000003572	REXO5	89	56.812	Erinaceus_europaeus
ENSCPBG00000019062	REXO5	98	48.232	ENSFCAG00000015160	REXO5	98	48.232	Felis_catus
ENSCPBG00000019062	REXO5	94	67.838	ENSFALG00000014026	REXO5	100	67.838	Ficedula_albicollis
ENSCPBG00000019062	REXO5	97	32.803	ENSFHEG00000013388	REXO5	98	32.803	Fundulus_heteroclitus
ENSCPBG00000019062	REXO5	99	64.607	ENSGALG00000002239	REXO5	99	64.607	Gallus_gallus
ENSCPBG00000019062	REXO5	96	32.479	ENSGAFG00000011045	REXO5	96	32.479	Gambusia_affinis
ENSCPBG00000019062	REXO5	100	93.409	ENSGAGG00000008242	REXO5	100	93.409	Gopherus_agassizii
ENSCPBG00000019062	REXO5	94	49.733	ENSGGOG00000004539	REXO5	94	49.733	Gorilla_gorilla
ENSCPBG00000019062	REXO5	97	34.420	ENSHBUG00000017976	REXO5	98	33.937	Haplochromis_burtoni
ENSCPBG00000019062	REXO5	86	45.308	ENSHGLG00000012652	REXO5	99	45.468	Heterocephalus_glaber_female
ENSCPBG00000019062	REXO5	94	45.418	ENSHGLG00100013255	REXO5	99	47.527	Heterocephalus_glaber_male
ENSCPBG00000019062	REXO5	62	39.370	ENSHCOG00000008648	REXO5	92	38.574	Hippocampus_comes
ENSCPBG00000019062	REXO5	79	49.361	ENSSTOG00000007071	REXO5	89	49.361	Ictidomys_tridecemlineatus
ENSCPBG00000019062	REXO5	96	46.527	ENSJJAG00000023821	-	97	46.527	Jaculus_jaculus
ENSCPBG00000019062	REXO5	93	34.975	ENSKMAG00000009488	REXO5	93	34.975	Kryptolebias_marmoratus
ENSCPBG00000019062	REXO5	91	34.935	ENSLBEG00000009276	REXO5	93	35.195	Labrus_bergylta
ENSCPBG00000019062	REXO5	77	47.191	ENSLACG00000001758	REXO5	99	47.191	Latimeria_chalumnae
ENSCPBG00000019062	REXO5	98	47.081	ENSLAFG00000006157	REXO5	98	47.081	Loxodonta_africana
ENSCPBG00000019062	REXO5	98	48.718	ENSMFAG00000036613	REXO5	97	48.718	Macaca_fascicularis
ENSCPBG00000019062	REXO5	98	48.846	ENSMMUG00000016748	REXO5	97	48.846	Macaca_mulatta
ENSCPBG00000019062	REXO5	98	48.718	ENSMNEG00000045028	REXO5	97	48.718	Macaca_nemestrina
ENSCPBG00000019062	REXO5	98	48.656	ENSMLEG00000029851	REXO5	97	48.656	Mandrillus_leucophaeus
ENSCPBG00000019062	REXO5	93	34.639	ENSMAMG00000006915	REXO5	93	34.639	Mastacembelus_armatus
ENSCPBG00000019062	REXO5	97	34.058	ENSMZEG00005013657	REXO5	98	33.575	Maylandia_zebra
ENSCPBG00000019062	REXO5	94	67.297	ENSMGAG00000010369	REXO5	100	67.297	Meleagris_gallopavo
ENSCPBG00000019062	REXO5	98	48.359	ENSMICG00000014886	REXO5	98	48.359	Microcebus_murinus
ENSCPBG00000019062	REXO5	58	49.458	ENSMOCG00000010062	-	98	49.458	Microtus_ochrogaster
ENSCPBG00000019062	REXO5	95	51.492	ENSMODG00000007059	REXO5	91	51.492	Monodelphis_domestica
ENSCPBG00000019062	REXO5	97	44.036	MGP_CAROLIEiJ_G0030385	-	99	44.036	Mus_caroli
ENSCPBG00000019062	REXO5	97	43.797	ENSMUSG00000030924	Rexo5	98	47.722	Mus_musculus
ENSCPBG00000019062	REXO5	97	43.671	MGP_SPRETEiJ_G0031499	-	99	43.671	Mus_spretus
ENSCPBG00000019062	REXO5	98	49.680	ENSMPUG00000013643	REXO5	97	49.680	Mustela_putorius_furo
ENSCPBG00000019062	REXO5	93	46.400	ENSNGAG00000002025	-	98	49.892	Nannospalax_galili
ENSCPBG00000019062	REXO5	65	44.162	ENSNBRG00000006877	REXO5	90	44.162	Neolamprologus_brichardi
ENSCPBG00000019062	REXO5	98	48.148	ENSNLEG00000012334	REXO5	97	48.148	Nomascus_leucogenys
ENSCPBG00000019062	REXO5	93	49.865	ENSMEUG00000015298	REXO5	99	49.865	Notamacropus_eugenii
ENSCPBG00000019062	REXO5	87	47.059	ENSOPRG00000011398	REXO5	86	47.059	Ochotona_princeps
ENSCPBG00000019062	REXO5	97	33.818	ENSONIG00000000148	REXO5	98	38.870	Oreochromis_niloticus
ENSCPBG00000019062	REXO5	93	51.064	ENSOANG00000014291	REXO5	100	51.064	Ornithorhynchus_anatinus
ENSCPBG00000019062	REXO5	98	47.943	ENSOCUG00000009913	REXO5	96	47.943	Oryctolagus_cuniculus
ENSCPBG00000019062	REXO5	91	35.611	ENSORLG00000009738	REXO5	93	35.611	Oryzias_latipes
ENSCPBG00000019062	REXO5	91	35.611	ENSORLG00020010270	REXO5	93	35.611	Oryzias_latipes_hni
ENSCPBG00000019062	REXO5	91	36.232	ENSORLG00015009678	REXO5	93	36.232	Oryzias_latipes_hsok
ENSCPBG00000019062	REXO5	91	36.863	ENSOMEG00000019491	REXO5	92	36.863	Oryzias_melastigma
ENSCPBG00000019062	REXO5	98	46.970	ENSOGAG00000011564	REXO5	98	46.970	Otolemur_garnettii
ENSCPBG00000019062	REXO5	99	48.561	ENSOARG00000013401	REXO5	99	48.432	Ovis_aries
ENSCPBG00000019062	REXO5	94	49.733	ENSPPAG00000035005	REXO5	94	49.733	Pan_paniscus
ENSCPBG00000019062	REXO5	98	46.784	ENSPPRG00000022345	REXO5	97	47.282	Panthera_pardus
ENSCPBG00000019062	REXO5	98	48.050	ENSPTIG00000012096	REXO5	98	48.550	Panthera_tigris_altaica
ENSCPBG00000019062	REXO5	94	50.200	ENSPTRG00000007851	REXO5	94	50.200	Pan_troglodytes
ENSCPBG00000019062	REXO5	98	48.718	ENSPANG00000006898	REXO5	97	48.718	Papio_anubis
ENSCPBG00000019062	REXO5	95	37.726	ENSPKIG00000014406	REXO5	99	37.726	Paramormyrops_kingsleyae
ENSCPBG00000019062	REXO5	100	87.183	ENSPSIG00000012172	REXO5	100	87.183	Pelodiscus_sinensis
ENSCPBG00000019062	REXO5	88	60.051	ENSPCIG00000029238	-	95	52.659	Phascolarctos_cinereus
ENSCPBG00000019062	REXO5	96	31.710	ENSPFOG00000012767	REXO5	98	32.242	Poecilia_formosa
ENSCPBG00000019062	REXO5	96	31.591	ENSPLAG00000006408	REXO5	98	32.121	Poecilia_latipinna
ENSCPBG00000019062	REXO5	96	31.710	ENSPMEG00000007726	REXO5	98	32.242	Poecilia_mexicana
ENSCPBG00000019062	REXO5	96	33.697	ENSPREG00000000146	REXO5	98	33.333	Poecilia_reticulata
ENSCPBG00000019062	REXO5	98	48.652	ENSPPYG00000007163	REXO5	97	48.652	Pongo_abelii
ENSCPBG00000019062	REXO5	90	46.566	ENSPCAG00000006265	REXO5	99	46.566	Procavia_capensis
ENSCPBG00000019062	REXO5	94	49.474	ENSPCOG00000018775	REXO5	94	49.474	Propithecus_coquereli
ENSCPBG00000019062	REXO5	93	49.128	ENSPVAG00000003293	REXO5	99	49.128	Pteropus_vampyrus
ENSCPBG00000019062	REXO5	95	33.816	ENSPNYG00000006922	REXO5	98	33.816	Pundamilia_nyererei
ENSCPBG00000019062	REXO5	96	36.213	ENSPNAG00000018866	-	98	36.213	Pygocentrus_nattereri
ENSCPBG00000019062	REXO5	93	45.040	ENSRNOG00000014513	Rexo5	94	45.040	Rattus_norvegicus
ENSCPBG00000019062	REXO5	98	48.469	ENSRBIG00000035163	REXO5	87	48.469	Rhinopithecus_bieti
ENSCPBG00000019062	REXO5	98	48.909	ENSRROG00000034741	REXO5	97	48.909	Rhinopithecus_roxellana
ENSCPBG00000019062	REXO5	98	47.475	ENSSBOG00000029650	REXO5	98	48.137	Saimiri_boliviensis_boliviensis
ENSCPBG00000019062	REXO5	94	52.933	ENSSHAG00000005042	REXO5	94	52.933	Sarcophilus_harrisii
ENSCPBG00000019062	REXO5	96	39.309	ENSSFOG00015007581	REXO5	98	39.309	Scleropages_formosus
ENSCPBG00000019062	REXO5	91	35.714	ENSSMAG00000000709	REXO5	91	35.714	Scophthalmus_maximus
ENSCPBG00000019062	REXO5	91	35.188	ENSSDUG00000014528	REXO5	91	34.955	Seriola_dumerili
ENSCPBG00000019062	REXO5	91	34.744	ENSSLDG00000007641	REXO5	91	34.699	Seriola_lalandi_dorsalis
ENSCPBG00000019062	REXO5	98	48.721	ENSSSCG00000007855	REXO5	98	48.721	Sus_scrofa
ENSCPBG00000019062	REXO5	94	67.703	ENSTGUG00000009219	REXO5	100	67.703	Taeniopygia_guttata
ENSCPBG00000019062	REXO5	87	34.469	ENSTRUG00000015295	-	96	34.432	Takifugu_rubripes
ENSCPBG00000019062	REXO5	84	47.263	ENSTBEG00000008797	REXO5	85	47.263	Tupaia_belangeri
ENSCPBG00000019062	REXO5	99	47.494	ENSTTRG00000016439	REXO5	99	47.494	Tursiops_truncatus
ENSCPBG00000019062	REXO5	86	48.538	ENSUAMG00000017756	REXO5	99	48.538	Ursus_americanus
ENSCPBG00000019062	REXO5	50	44.361	ENSUMAG00000010466	-	92	44.140	Ursus_maritimus
ENSCPBG00000019062	REXO5	94	45.600	ENSVPAG00000003459	REXO5	94	45.600	Vicugna_pacos
ENSCPBG00000019062	REXO5	98	49.361	ENSVVUG00000023257	REXO5	98	49.361	Vulpes_vulpes
ENSCPBG00000019062	REXO5	94	45.960	ENSXETG00000016735	rexo5	98	45.960	Xenopus_tropicalis
ENSCPBG00000019062	REXO5	79	34.135	ENSXCOG00000015997	REXO5	73	34.135	Xiphophorus_couchianus
ENSCPBG00000019062	REXO5	98	32.547	ENSXMAG00000014770	REXO5	99	32.429	Xiphophorus_maculatus