EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000019136 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 40881 bases
Position: chrKK083092.1:179767-220647
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000026984	PRP4	PF08799.11	8.4e-14	1	1
ENSCPBP00000026986	PRP4	PF08799.11	9.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000031776	PRPF4-201	6657	-	ENSCPBP00000026984	651 (aa)	-	-
ENSCPBT00000031778	PRPF4-202	2917	-	ENSCPBP00000026986	695 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000019136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019136's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019136	PRPF4	74	91.262	ENSG00000136875	PRPF4	99	91.262	Homo_sapiens
ENSCPBG00000019136	PRPF4	73	76.653	ENSAPOG00000014132	prpf4	99	76.653	Acanthochromis_polyacanthus
ENSCPBG00000019136	PRPF4	74	91.456	ENSAMEG00000013048	PRPF4	96	91.456	Ailuropoda_melanoleuca
ENSCPBG00000019136	PRPF4	73	76.923	ENSACIG00000005579	prpf4	100	76.667	Amphilophus_citrinellus
ENSCPBG00000019136	PRPF4	73	75.787	ENSAOCG00000005457	prpf4	100	75.538	Amphiprion_ocellaris
ENSCPBG00000019136	PRPF4	73	75.591	ENSAPEG00000000776	prpf4	100	75.342	Amphiprion_percula
ENSCPBG00000019136	PRPF4	73	75.740	ENSATEG00000023013	prpf4	100	75.490	Anabas_testudineus
ENSCPBG00000019136	PRPF4	75	91.048	ENSAPLG00000006534	PRPF4	98	91.048	Anas_platyrhynchos
ENSCPBG00000019136	PRPF4	73	91.211	ENSACAG00000015110	PRPF4	98	91.211	Anolis_carolinensis
ENSCPBG00000019136	PRPF4	76	89.924	ENSANAG00000022464	PRPF4	97	89.924	Aotus_nancymaae
ENSCPBG00000019136	PRPF4	73	76.134	ENSACLG00000019031	prpf4	99	76.134	Astatotilapia_calliptera
ENSCPBG00000019136	PRPF4	73	61.759	ENSAMXG00000006756	prpf4	100	72.387	Astyanax_mexicanus
ENSCPBG00000019136	PRPF4	74	91.279	ENSBTAG00000004571	PRPF4	99	91.279	Bos_taurus
ENSCPBG00000019136	PRPF4	68	44.000	WBGene00007972	prp-4	96	44.660	Caenorhabditis_elegans
ENSCPBG00000019136	PRPF4	74	91.296	ENSCJAG00000017856	PRPF4	99	91.296	Callithrix_jacchus
ENSCPBG00000019136	PRPF4	79	87.273	ENSCAFG00000003224	PRPF4	98	89.905	Canis_familiaris
ENSCPBG00000019136	PRPF4	74	91.797	ENSCAFG00020022637	PRPF4	99	91.797	Canis_lupus_dingo
ENSCPBG00000019136	PRPF4	74	91.456	ENSCHIG00000024648	-	99	91.456	Capra_hircus
ENSCPBG00000019136	PRPF4	78	87.845	ENSTSYG00000010366	PRPF4	99	91.262	Carlito_syrichta
ENSCPBG00000019136	PRPF4	65	84.672	ENSCAPG00000008935	PRPF4	97	83.532	Cavia_aperea
ENSCPBG00000019136	PRPF4	74	90.680	ENSCPOG00000010747	-	99	90.680	Cavia_porcellus
ENSCPBG00000019136	PRPF4	74	85.049	ENSCPOG00000014729	-	99	85.049	Cavia_porcellus
ENSCPBG00000019136	PRPF4	74	91.650	ENSCCAG00000028990	PRPF4	99	91.650	Cebus_capucinus
ENSCPBG00000019136	PRPF4	73	92.277	ENSCATG00000021552	PRPF4	99	91.456	Cercocebus_atys
ENSCPBG00000019136	PRPF4	74	90.874	ENSCLAG00000013448	PRPF4	99	90.874	Chinchilla_lanigera
ENSCPBG00000019136	PRPF4	65	91.372	ENSCHOG00000007233	PRPF4	100	91.372	Choloepus_hoffmanni
ENSCPBG00000019136	PRPF4	71	60.161	ENSCING00000001299	-	95	59.514	Ciona_intestinalis
ENSCPBG00000019136	PRPF4	71	59.717	ENSCSAVG00000009178	-	99	60.173	Ciona_savignyi
ENSCPBG00000019136	PRPF4	76	90.114	ENSCANG00000003246	PRPF4	99	91.456	Colobus_angolensis_palliatus
ENSCPBG00000019136	PRPF4	74	91.068	ENSCGRG00001016992	Prpf4	99	91.068	Cricetulus_griseus_chok1gshd
ENSCPBG00000019136	PRPF4	74	91.068	ENSCGRG00000017560	Prpf4	99	91.068	Cricetulus_griseus_crigri
ENSCPBG00000019136	PRPF4	73	75.787	ENSCSEG00000020451	prpf4	100	75.787	Cynoglossus_semilaevis
ENSCPBG00000019136	PRPF4	73	79.093	ENSDARG00000067639	prpf4	100	79.093	Danio_rerio
ENSCPBG00000019136	PRPF4	78	87.778	ENSDNOG00000013203	PRPF4	99	90.522	Dasypus_novemcinctus
ENSCPBG00000019136	PRPF4	74	91.456	ENSDORG00000026275	Prpf4	99	91.456	Dipodomys_ordii
ENSCPBG00000019136	PRPF4	65	56.893	FBgn0036733	U4-U6-60K	99	50.454	Drosophila_melanogaster
ENSCPBG00000019136	PRPF4	74	90.504	ENSETEG00000020389	PRPF4	99	90.504	Echinops_telfairi
ENSCPBG00000019136	PRPF4	73	72.072	ENSEBUG00000015229	prpf4	89	72.483	Eptatretus_burgeri
ENSCPBG00000019136	PRPF4	74	91.456	ENSEASG00005022678	PRPF4	99	91.456	Equus_asinus_asinus
ENSCPBG00000019136	PRPF4	74	91.456	ENSECAG00000007072	PRPF4	99	91.456	Equus_caballus
ENSCPBG00000019136	PRPF4	64	93.305	ENSEEUG00000007480	PRPF4	83	93.305	Erinaceus_europaeus
ENSCPBG00000019136	PRPF4	73	79.290	ENSELUG00000007510	prpf4	100	79.290	Esox_lucius
ENSCPBG00000019136	PRPF4	74	91.296	ENSFCAG00000005514	PRPF4	99	91.296	Felis_catus
ENSCPBG00000019136	PRPF4	73	91.031	ENSFALG00000005423	PRPF4	92	87.474	Ficedula_albicollis
ENSCPBG00000019136	PRPF4	74	90.680	ENSFDAG00000005839	PRPF4	99	90.680	Fukomys_damarensis
ENSCPBG00000019136	PRPF4	73	76.134	ENSFHEG00000001300	prpf4	99	76.134	Fundulus_heteroclitus
ENSCPBG00000019136	PRPF4	78	89.074	ENSGALG00000008857	PRPF4	98	90.702	Gallus_gallus
ENSCPBG00000019136	PRPF4	51	71.386	ENSGAFG00000012164	prpf4	68	71.386	Gambusia_affinis
ENSCPBG00000019136	PRPF4	73	68.945	ENSGACG00000015476	prpf4	99	68.555	Gasterosteus_aculeatus
ENSCPBG00000019136	PRPF4	78	98.519	ENSGAGG00000025029	PRPF4	100	98.519	Gopherus_agassizii
ENSCPBG00000019136	PRPF4	79	87.273	ENSGGOG00000006943	PRPF4	99	91.262	Gorilla_gorilla
ENSCPBG00000019136	PRPF4	73	75.937	ENSHBUG00000000562	prpf4	100	75.569	Haplochromis_burtoni
ENSCPBG00000019136	PRPF4	74	90.680	ENSHGLG00000015191	PRPF4	99	90.680	Heterocephalus_glaber_female
ENSCPBG00000019136	PRPF4	74	75.048	ENSHGLG00000016628	-	99	75.822	Heterocephalus_glaber_female
ENSCPBG00000019136	PRPF4	78	70.741	ENSHGLG00000003838	-	99	72.816	Heterocephalus_glaber_female
ENSCPBG00000019136	PRPF4	78	70.741	ENSHGLG00100005571	-	99	72.816	Heterocephalus_glaber_male
ENSCPBG00000019136	PRPF4	73	77.318	ENSIPUG00000017956	PRPF4	100	77.318	Ictalurus_punctatus
ENSCPBG00000019136	PRPF4	74	90.874	ENSSTOG00000027833	PRPF4	99	90.874	Ictidomys_tridecemlineatus
ENSCPBG00000019136	PRPF4	74	91.262	ENSJJAG00000008838	Prpf4	99	91.262	Jaculus_jaculus
ENSCPBG00000019136	PRPF4	73	75.937	ENSKMAG00000013236	prpf4	99	75.937	Kryptolebias_marmoratus
ENSCPBG00000019136	PRPF4	73	75.591	ENSLBEG00000020611	prpf4	100	75.591	Labrus_bergylta
ENSCPBG00000019136	PRPF4	73	79.688	ENSLACG00000016317	PRPF4	98	79.688	Latimeria_chalumnae
ENSCPBG00000019136	PRPF4	73	80.671	ENSLOCG00000000581	prpf4	100	80.671	Lepisosteus_oculatus
ENSCPBG00000019136	PRPF4	74	90.891	ENSLAFG00000018225	PRPF4	99	90.891	Loxodonta_africana
ENSCPBG00000019136	PRPF4	73	92.079	ENSMFAG00000039397	PRPF4	99	91.262	Macaca_fascicularis
ENSCPBG00000019136	PRPF4	73	92.277	ENSMMUG00000005844	PRPF4	99	91.456	Macaca_mulatta
ENSCPBG00000019136	PRPF4	73	82.178	ENSMNEG00000033737	PRPF4	99	81.553	Macaca_nemestrina
ENSCPBG00000019136	PRPF4	73	92.277	ENSMLEG00000040284	PRPF4	99	91.456	Mandrillus_leucophaeus
ENSCPBG00000019136	PRPF4	73	75.686	ENSMAMG00000020141	prpf4	100	75.686	Mastacembelus_armatus
ENSCPBG00000019136	PRPF4	73	76.134	ENSMZEG00005023205	prpf4	99	76.134	Maylandia_zebra
ENSCPBG00000019136	PRPF4	73	91.961	ENSMGAG00000001796	PRPF4	95	91.961	Meleagris_gallopavo
ENSCPBG00000019136	PRPF4	73	91.176	ENSMAUG00000018022	Prpf4	99	90.680	Mesocricetus_auratus
ENSCPBG00000019136	PRPF4	75	89.333	ENSMICG00000015022	PRPF4	99	90.329	Microcebus_murinus
ENSCPBG00000019136	PRPF4	74	90.680	ENSMOCG00000018273	Prpf4	99	90.680	Microtus_ochrogaster
ENSCPBG00000019136	PRPF4	73	75.197	ENSMMOG00000021177	prpf4	100	75.197	Mola_mola
ENSCPBG00000019136	PRPF4	78	87.661	ENSMODG00000025096	-	94	91.881	Monodelphis_domestica
ENSCPBG00000019136	PRPF4	78	87.431	ENSMODG00000004444	-	99	90.135	Monodelphis_domestica
ENSCPBG00000019136	PRPF4	73	76.134	ENSMALG00000013624	prpf4	100	75.882	Monopterus_albus
ENSCPBG00000019136	PRPF4	74	90.874	MGP_CAROLIEiJ_G0026078	Prpf4	99	90.874	Mus_caroli
ENSCPBG00000019136	PRPF4	74	90.874	ENSMUSG00000066148	Prpf4	99	90.874	Mus_musculus
ENSCPBG00000019136	PRPF4	74	90.680	MGP_PahariEiJ_G0028413	Prpf4	99	90.680	Mus_pahari
ENSCPBG00000019136	PRPF4	74	90.874	MGP_SPRETEiJ_G0027042	Prpf4	99	90.874	Mus_spretus
ENSCPBG00000019136	PRPF4	74	91.456	ENSMPUG00000007883	PRPF4	99	91.456	Mustela_putorius_furo
ENSCPBG00000019136	PRPF4	75	90.095	ENSMLUG00000015309	-	98	90.095	Myotis_lucifugus
ENSCPBG00000019136	PRPF4	75	88.337	ENSMLUG00000008626	-	98	88.337	Myotis_lucifugus
ENSCPBG00000019136	PRPF4	74	85.825	ENSNGAG00000000468	Prpf4	99	85.825	Nannospalax_galili
ENSCPBG00000019136	PRPF4	73	76.331	ENSNBRG00000007972	prpf4	99	76.331	Neolamprologus_brichardi
ENSCPBG00000019136	PRPF4	79	87.500	ENSNLEG00000016647	PRPF4	99	91.456	Nomascus_leucogenys
ENSCPBG00000019136	PRPF4	73	91.881	ENSMEUG00000013256	PRPF4	98	91.881	Notamacropus_eugenii
ENSCPBG00000019136	PRPF4	74	90.909	ENSOPRG00000005302	PRPF4	99	90.909	Ochotona_princeps
ENSCPBG00000019136	PRPF4	74	91.068	ENSODEG00000018147	PRPF4	99	91.068	Octodon_degus
ENSCPBG00000019136	PRPF4	73	76.134	ENSONIG00000012671	prpf4	99	76.134	Oreochromis_niloticus
ENSCPBG00000019136	PRPF4	74	91.650	ENSOCUG00000005046	PRPF4	99	91.650	Oryctolagus_cuniculus
ENSCPBG00000019136	PRPF4	73	74.409	ENSORLG00000019641	prpf4	100	74.409	Oryzias_latipes
ENSCPBG00000019136	PRPF4	73	74.409	ENSORLG00020019438	prpf4	100	74.409	Oryzias_latipes_hni
ENSCPBG00000019136	PRPF4	73	74.844	ENSOMEG00000020941	prpf4	100	74.844	Oryzias_melastigma
ENSCPBG00000019136	PRPF4	75	85.660	ENSOGAG00000007802	PRPF4	98	85.660	Otolemur_garnettii
ENSCPBG00000019136	PRPF4	75	90.476	ENSOARG00000006319	PRPF4	97	90.476	Ovis_aries
ENSCPBG00000019136	PRPF4	79	87.273	ENSPPAG00000041797	PRPF4	99	91.262	Pan_paniscus
ENSCPBG00000019136	PRPF4	74	91.456	ENSPPRG00000014360	PRPF4	99	91.456	Panthera_pardus
ENSCPBG00000019136	PRPF4	74	91.456	ENSPTIG00000009574	PRPF4	99	91.456	Panthera_tigris_altaica
ENSCPBG00000019136	PRPF4	79	87.273	ENSPTRG00000021274	PRPF4	99	91.103	Pan_troglodytes
ENSCPBG00000019136	PRPF4	73	92.079	ENSPANG00000025776	PRPF4	97	90.095	Papio_anubis
ENSCPBG00000019136	PRPF4	73	81.065	ENSPKIG00000017259	prpf4	100	81.065	Paramormyrops_kingsleyae
ENSCPBG00000019136	PRPF4	74	96.296	ENSPSIG00000010713	PRPF4	90	96.437	Pelodiscus_sinensis
ENSCPBG00000019136	PRPF4	74	57.692	ENSPMGG00000000997	prpf4	99	57.509	Periophthalmus_magnuspinnatus
ENSCPBG00000019136	PRPF4	74	91.068	ENSPEMG00000024115	Prpf4	99	91.068	Peromyscus_maniculatus_bairdii
ENSCPBG00000019136	PRPF4	73	92.079	ENSPCIG00000003821	PRPF4	98	92.079	Phascolarctos_cinereus
ENSCPBG00000019136	PRPF4	73	69.276	ENSPFOG00000013524	prpf4	99	71.472	Poecilia_formosa
ENSCPBG00000019136	PRPF4	50	71.166	ENSPLAG00000011620	prpf4	99	69.277	Poecilia_latipinna
ENSCPBG00000019136	PRPF4	71	72.321	ENSPMEG00000006813	prpf4	99	72.321	Poecilia_mexicana
ENSCPBG00000019136	PRPF4	74	91.051	ENSPCAG00000002561	PRPF4	100	91.051	Procavia_capensis
ENSCPBG00000019136	PRPF4	75	89.714	ENSPCOG00000011975	PRPF4	99	90.874	Propithecus_coquereli
ENSCPBG00000019136	PRPF4	74	87.814	ENSPVAG00000004708	PRPF4	99	87.814	Pteropus_vampyrus
ENSCPBG00000019136	PRPF4	73	76.134	ENSPNYG00000008013	prpf4	99	76.134	Pundamilia_nyererei
ENSCPBG00000019136	PRPF4	73	78.698	ENSPNAG00000000697	prpf4	100	78.698	Pygocentrus_nattereri
ENSCPBG00000019136	PRPF4	74	90.680	ENSRNOG00000014777	Prpf4	99	90.680	Rattus_norvegicus
ENSCPBG00000019136	PRPF4	74	91.456	ENSRBIG00000040221	PRPF4	99	91.456	Rhinopithecus_bieti
ENSCPBG00000019136	PRPF4	74	91.456	ENSRROG00000040240	PRPF4	99	91.456	Rhinopithecus_roxellana
ENSCPBG00000019136	PRPF4	78	87.985	ENSSHAG00000017658	PRPF4	99	90.716	Sarcophilus_harrisii
ENSCPBG00000019136	PRPF4	73	82.249	ENSSFOG00015008963	prpf4	100	82.249	Scleropages_formosus
ENSCPBG00000019136	PRPF4	73	75.490	ENSSMAG00000008889	prpf4	100	75.490	Scophthalmus_maximus
ENSCPBG00000019136	PRPF4	73	72.835	ENSSDUG00000022083	prpf4	99	73.031	Seriola_dumerili
ENSCPBG00000019136	PRPF4	73	73.069	ENSSLDG00000008115	prpf4	99	73.031	Seriola_lalandi_dorsalis
ENSCPBG00000019136	PRPF4	74	92.621	ENSSPUG00000015582	PRPF4	99	92.621	Sphenodon_punctatus
ENSCPBG00000019136	PRPF4	73	70.784	ENSSPAG00000011286	prpf4	100	70.565	Stegastes_partitus
ENSCPBG00000019136	PRPF4	74	91.456	ENSSSCG00000024648	PRPF4	99	91.456	Sus_scrofa
ENSCPBG00000019136	PRPF4	75	88.506	ENSTGUG00000002623	PRPF4	100	92.638	Taeniopygia_guttata
ENSCPBG00000019136	PRPF4	73	75.246	ENSTRUG00000008853	prpf4	100	75.246	Takifugu_rubripes
ENSCPBG00000019136	PRPF4	73	75.591	ENSTNIG00000013250	prpf4	100	75.591	Tetraodon_nigroviridis
ENSCPBG00000019136	PRPF4	74	82.785	ENSTBEG00000000821	PRPF4	99	82.785	Tupaia_belangeri
ENSCPBG00000019136	PRPF4	61	95.349	ENSTTRG00000003246	PRPF4	85	95.349	Tursiops_truncatus
ENSCPBG00000019136	PRPF4	50	86.890	ENSUAMG00000018288	PRPF4	88	89.902	Ursus_americanus
ENSCPBG00000019136	PRPF4	74	90.874	ENSUMAG00000019375	PRPF4	99	90.874	Ursus_maritimus
ENSCPBG00000019136	PRPF4	74	91.103	ENSVPAG00000005281	PRPF4	99	91.103	Vicugna_pacos
ENSCPBG00000019136	PRPF4	74	90.698	ENSVVUG00000002476	PRPF4	99	91.683	Vulpes_vulpes
ENSCPBG00000019136	PRPF4	52	59.249	ENSXCOG00000006101	prpf4	93	60.345	Xiphophorus_couchianus
ENSCPBG00000019136	PRPF4	68	64.732	ENSXMAG00000002750	prpf4	99	65.226	Xiphophorus_maculatus