EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000019146 (Gene tree)
Gene ID: 101934098
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 13765 bases
Position: chrKK083261.1:96413-110177
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000027004	zf-U11-48K	PF05253.12	4.9e-09	1	1
ENSCPBP00000027003	zf-U11-48K	PF05253.12	4.9e-09	1	1
ENSCPBP00000027002	zf-U11-48K	PF05253.12	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000031796	SNRNP48-203	2534	-	ENSCPBP00000027004	321 (aa)	-	-
ENSCPBT00000031795	SNRNP48-202	1739	-	ENSCPBP00000027003	329 (aa)	XP_005311880	UPI000388E837
ENSCPBT00000031794	SNRNP48-201	1746	-	ENSCPBP00000027002	323 (aa)	XP_005311881	UPI000388FF84

Gene Model

Click here to download ENSCPBG00000019146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019146	SNRNP48	90	64.310	ENSG00000168566	SNRNP48	85	63.487	Homo_sapiens
ENSCPBG00000019146	SNRNP48	75	51.867	ENSAPOG00000021430	snrnp48	86	46.250	Acanthochromis_polyacanthus
ENSCPBG00000019146	SNRNP48	92	64.145	ENSAMEG00000017349	SNRNP48	86	64.145	Ailuropoda_melanoleuca
ENSCPBG00000019146	SNRNP48	75	48.374	ENSACIG00000002032	snrnp48	80	43.791	Amphilophus_citrinellus
ENSCPBG00000019146	SNRNP48	75	51.867	ENSAOCG00000010562	snrnp48	82	47.712	Amphiprion_ocellaris
ENSCPBG00000019146	SNRNP48	65	53.333	ENSAPEG00000003231	snrnp48	86	45.872	Amphiprion_percula
ENSCPBG00000019146	SNRNP48	75	51.867	ENSATEG00000020210	snrnp48	80	49.117	Anabas_testudineus
ENSCPBG00000019146	SNRNP48	94	74.516	ENSACAG00000002811	SNRNP48	94	74.516	Anolis_carolinensis
ENSCPBG00000019146	SNRNP48	90	63.973	ENSANAG00000033538	SNRNP48	85	63.158	Aotus_nancymaae
ENSCPBG00000019146	SNRNP48	88	50.355	ENSAMXG00000015309	snrnp48	88	48.693	Astyanax_mexicanus
ENSCPBG00000019146	SNRNP48	90	64.746	ENSBTAG00000001123	SNRNP48	84	64.238	Bos_taurus
ENSCPBG00000019146	SNRNP48	90	64.646	ENSCJAG00000021330	SNRNP48	85	63.816	Callithrix_jacchus
ENSCPBG00000019146	SNRNP48	92	64.901	ENSCAFG00000009574	SNRNP48	71	64.901	Canis_familiaris
ENSCPBG00000019146	SNRNP48	92	65.232	ENSCAFG00020013203	SNRNP48	84	65.232	Canis_lupus_dingo
ENSCPBG00000019146	SNRNP48	90	64.407	ENSCHIG00000015216	SNRNP48	84	63.907	Capra_hircus
ENSCPBG00000019146	SNRNP48	90	62.838	ENSTSYG00000000698	SNRNP48	85	62.583	Carlito_syrichta
ENSCPBG00000019146	SNRNP48	98	61.059	ENSCAPG00000006768	SNRNP48	99	61.059	Cavia_aperea
ENSCPBG00000019146	SNRNP48	90	64.068	ENSCPOG00000007910	SNRNP48	85	63.245	Cavia_porcellus
ENSCPBG00000019146	SNRNP48	90	63.973	ENSCCAG00000035652	SNRNP48	85	63.158	Cebus_capucinus
ENSCPBG00000019146	SNRNP48	90	63.300	ENSCATG00000033947	SNRNP48	85	62.500	Cercocebus_atys
ENSCPBG00000019146	SNRNP48	90	64.746	ENSCLAG00000003765	SNRNP48	85	63.907	Chinchilla_lanigera
ENSCPBG00000019146	SNRNP48	92	63.158	ENSCSAG00000007409	SNRNP48	85	63.158	Chlorocebus_sabaeus
ENSCPBG00000019146	SNRNP48	90	63.973	ENSCANG00000030017	SNRNP48	85	63.158	Colobus_angolensis_palliatus
ENSCPBG00000019146	SNRNP48	91	64.452	ENSCGRG00001001076	-	84	64.452	Cricetulus_griseus_chok1gshd
ENSCPBG00000019146	SNRNP48	91	53.242	ENSCGRG00001008805	-	84	53.242	Cricetulus_griseus_chok1gshd
ENSCPBG00000019146	SNRNP48	91	64.452	ENSCGRG00000007781	Snrnp48	84	64.452	Cricetulus_griseus_crigri
ENSCPBG00000019146	SNRNP48	69	48.430	ENSCSEG00000000722	snrnp48	77	43.599	Cynoglossus_semilaevis
ENSCPBG00000019146	SNRNP48	86	47.464	ENSCVAG00000019829	snrnp48	79	45.253	Cyprinodon_variegatus
ENSCPBG00000019146	SNRNP48	77	52.191	ENSDARG00000039989	snrnp48	83	48.161	Danio_rerio
ENSCPBG00000019146	SNRNP48	96	63.091	ENSDNOG00000014978	SNRNP48	86	63.091	Dasypus_novemcinctus
ENSCPBG00000019146	SNRNP48	92	61.258	ENSDORG00000015140	Snrnp48	84	61.258	Dipodomys_ordii
ENSCPBG00000019146	SNRNP48	92	63.576	ENSEASG00005012021	SNRNP48	85	63.576	Equus_asinus_asinus
ENSCPBG00000019146	SNRNP48	92	63.907	ENSECAG00000026937	SNRNP48	85	63.907	Equus_caballus
ENSCPBG00000019146	SNRNP48	92	46.865	ENSEEUG00000015437	SNRNP48	84	46.865	Erinaceus_europaeus
ENSCPBG00000019146	SNRNP48	85	50.916	ENSELUG00000009766	snrnp48	84	47.727	Esox_lucius
ENSCPBG00000019146	SNRNP48	92	65.461	ENSFCAG00000018853	SNRNP48	85	65.461	Felis_catus
ENSCPBG00000019146	SNRNP48	94	75.079	ENSFALG00000007797	SNRNP48	98	76.358	Ficedula_albicollis
ENSCPBG00000019146	SNRNP48	92	62.252	ENSFDAG00000009231	SNRNP48	85	62.252	Fukomys_damarensis
ENSCPBG00000019146	SNRNP48	63	55.446	ENSFHEG00000014647	snrnp48	96	47.619	Fundulus_heteroclitus
ENSCPBG00000019146	SNRNP48	62	55.051	ENSGMOG00000018599	-	86	46.715	Gadus_morhua
ENSCPBG00000019146	SNRNP48	90	77.163	ENSGALG00000013005	SNRNP48	96	77.163	Gallus_gallus
ENSCPBG00000019146	SNRNP48	64	55.882	ENSGAFG00000021639	snrnp48	81	48.311	Gambusia_affinis
ENSCPBG00000019146	SNRNP48	63	52.239	ENSGACG00000017756	-	84	44.554	Gasterosteus_aculeatus
ENSCPBG00000019146	SNRNP48	95	94.855	ENSGAGG00000000865	SNRNP48	100	94.855	Gopherus_agassizii
ENSCPBG00000019146	SNRNP48	90	64.310	ENSGGOG00000013220	SNRNP48	85	63.487	Gorilla_gorilla
ENSCPBG00000019146	SNRNP48	65	51.923	ENSHBUG00000017066	snrnp48	82	43.548	Haplochromis_burtoni
ENSCPBG00000019146	SNRNP48	92	63.245	ENSHGLG00000015241	SNRNP48	85	63.245	Heterocephalus_glaber_female
ENSCPBG00000019146	SNRNP48	92	63.245	ENSHGLG00100010027	SNRNP48	85	63.245	Heterocephalus_glaber_male
ENSCPBG00000019146	SNRNP48	64	51.208	ENSHCOG00000014066	snrnp48	81	44.746	Hippocampus_comes
ENSCPBG00000019146	SNRNP48	92	64.474	ENSSTOG00000014635	SNRNP48	85	64.474	Ictidomys_tridecemlineatus
ENSCPBG00000019146	SNRNP48	92	61.921	ENSJJAG00000011495	Snrnp48	85	61.921	Jaculus_jaculus
ENSCPBG00000019146	SNRNP48	88	45.745	ENSKMAG00000016514	snrnp48	82	45.000	Kryptolebias_marmoratus
ENSCPBG00000019146	SNRNP48	66	51.659	ENSLBEG00000026249	snrnp48	83	45.183	Labrus_bergylta
ENSCPBG00000019146	SNRNP48	91	60.269	ENSLACG00000003958	SNRNP48	88	58.766	Latimeria_chalumnae
ENSCPBG00000019146	SNRNP48	79	57.364	ENSLOCG00000004187	snrnp48	83	54.455	Lepisosteus_oculatus
ENSCPBG00000019146	SNRNP48	90	64.746	ENSLAFG00000011152	SNRNP48	85	63.907	Loxodonta_africana
ENSCPBG00000019146	SNRNP48	90	64.310	ENSMFAG00000045216	SNRNP48	85	63.487	Macaca_fascicularis
ENSCPBG00000019146	SNRNP48	90	64.310	ENSMMUG00000014785	SNRNP48	85	63.487	Macaca_mulatta
ENSCPBG00000019146	SNRNP48	90	64.310	ENSMNEG00000042269	SNRNP48	85	63.487	Macaca_nemestrina
ENSCPBG00000019146	SNRNP48	90	64.310	ENSMLEG00000034004	SNRNP48	85	63.487	Mandrillus_leucophaeus
ENSCPBG00000019146	SNRNP48	64	54.412	ENSMAMG00000018673	snrnp48	71	47.959	Mastacembelus_armatus
ENSCPBG00000019146	SNRNP48	89	77.891	ENSMGAG00000006037	SNRNP48	99	77.891	Meleagris_gallopavo
ENSCPBG00000019146	SNRNP48	92	64.901	ENSMAUG00000011944	Snrnp48	85	64.901	Mesocricetus_auratus
ENSCPBG00000019146	SNRNP48	90	65.085	ENSMICG00000012497	SNRNP48	85	64.238	Microcebus_murinus
ENSCPBG00000019146	SNRNP48	92	63.907	ENSMOCG00000015555	Snrnp48	85	63.907	Microtus_ochrogaster
ENSCPBG00000019146	SNRNP48	60	53.125	ENSMMOG00000003072	-	60	53.125	Mola_mola
ENSCPBG00000019146	SNRNP48	91	73.510	ENSMODG00000009996	SNRNP48	80	73.510	Monodelphis_domestica
ENSCPBG00000019146	SNRNP48	65	55.714	ENSMALG00000005725	snrnp48	83	47.333	Monopterus_albus
ENSCPBG00000019146	SNRNP48	91	63.123	MGP_CAROLIEiJ_G0018441	Snrnp48	84	63.123	Mus_caroli
ENSCPBG00000019146	SNRNP48	91	64.120	ENSMUSG00000021431	Snrnp48	84	64.120	Mus_musculus
ENSCPBG00000019146	SNRNP48	91	64.784	MGP_PahariEiJ_G0019509	Snrnp48	84	64.784	Mus_pahari
ENSCPBG00000019146	SNRNP48	91	64.452	MGP_SPRETEiJ_G0019321	Snrnp48	84	64.452	Mus_spretus
ENSCPBG00000019146	SNRNP48	91	63.455	ENSNGAG00000004849	Snrnp48	84	63.455	Nannospalax_galili
ENSCPBG00000019146	SNRNP48	65	51.923	ENSNBRG00000012127	snrnp48	82	44.156	Neolamprologus_brichardi
ENSCPBG00000019146	SNRNP48	90	64.310	ENSNLEG00000011667	SNRNP48	85	63.487	Nomascus_leucogenys
ENSCPBG00000019146	SNRNP48	89	61.672	ENSOPRG00000015471	SNRNP48	85	62.021	Ochotona_princeps
ENSCPBG00000019146	SNRNP48	90	45.139	ENSONIG00000001520	snrnp48	82	44.481	Oreochromis_niloticus
ENSCPBG00000019146	SNRNP48	78	65.339	ENSOCUG00000005168	SNRNP48	83	65.056	Oryctolagus_cuniculus
ENSCPBG00000019146	SNRNP48	78	51.807	ENSORLG00000015654	snrnp48	82	48.505	Oryzias_latipes
ENSCPBG00000019146	SNRNP48	78	50.201	ENSORLG00020015976	snrnp48	70	47.841	Oryzias_latipes_hni
ENSCPBG00000019146	SNRNP48	78	51.807	ENSORLG00015022379	snrnp48	71	48.837	Oryzias_latipes_hsok
ENSCPBG00000019146	SNRNP48	84	49.630	ENSOMEG00000022007	snrnp48	86	47.664	Oryzias_melastigma
ENSCPBG00000019146	SNRNP48	88	64.085	ENSOGAG00000005275	SNRNP48	84	63.605	Otolemur_garnettii
ENSCPBG00000019146	SNRNP48	91	63.211	ENSOARG00000017319	SNRNP48	99	63.455	Ovis_aries
ENSCPBG00000019146	SNRNP48	90	64.310	ENSPPAG00000032873	SNRNP48	85	63.487	Pan_paniscus
ENSCPBG00000019146	SNRNP48	92	65.461	ENSPPRG00000004283	SNRNP48	85	65.461	Panthera_pardus
ENSCPBG00000019146	SNRNP48	90	66.443	ENSPTIG00000013502	SNRNP48	98	66.443	Panthera_tigris_altaica
ENSCPBG00000019146	SNRNP48	90	64.310	ENSPTRG00000017703	SNRNP48	85	63.487	Pan_troglodytes
ENSCPBG00000019146	SNRNP48	90	64.310	ENSPANG00000000771	SNRNP48	85	63.487	Papio_anubis
ENSCPBG00000019146	SNRNP48	91	46.753	ENSPKIG00000013703	snrnp48	63	47.351	Paramormyrops_kingsleyae
ENSCPBG00000019146	SNRNP48	91	88.333	ENSPSIG00000002213	SNRNP48	94	88.333	Pelodiscus_sinensis
ENSCPBG00000019146	SNRNP48	69	50.224	ENSPMGG00000008120	snrnp48	78	50.224	Periophthalmus_magnuspinnatus
ENSCPBG00000019146	SNRNP48	92	64.570	ENSPEMG00000008872	Snrnp48	85	64.570	Peromyscus_maniculatus_bairdii
ENSCPBG00000019146	SNRNP48	66	53.555	ENSPFOG00000003578	snrnp48	83	46.865	Poecilia_formosa
ENSCPBG00000019146	SNRNP48	59	52.632	ENSPLAG00000002290	snrnp48	65	52.632	Poecilia_latipinna
ENSCPBG00000019146	SNRNP48	66	54.502	ENSPMEG00000018033	snrnp48	83	47.525	Poecilia_mexicana
ENSCPBG00000019146	SNRNP48	64	54.589	ENSPREG00000018541	snrnp48	82	48.675	Poecilia_reticulata
ENSCPBG00000019146	SNRNP48	90	63.300	ENSPPYG00000016209	SNRNP48	85	62.500	Pongo_abelii
ENSCPBG00000019146	SNRNP48	64	55.610	ENSPCAG00000011991	SNRNP48	78	54.717	Procavia_capensis
ENSCPBG00000019146	SNRNP48	90	65.541	ENSPVAG00000002854	SNRNP48	85	64.686	Pteropus_vampyrus
ENSCPBG00000019146	SNRNP48	65	51.923	ENSPNYG00000015399	snrnp48	84	45.675	Pundamilia_nyererei
ENSCPBG00000019146	SNRNP48	91	64.452	ENSRNOG00000013756	Snrnp48	84	64.452	Rattus_norvegicus
ENSCPBG00000019146	SNRNP48	85	65.455	ENSRBIG00000043856	SNRNP48	84	64.539	Rhinopithecus_bieti
ENSCPBG00000019146	SNRNP48	90	63.973	ENSRROG00000043229	SNRNP48	85	63.158	Rhinopithecus_roxellana
ENSCPBG00000019146	SNRNP48	90	64.310	ENSSBOG00000019486	SNRNP48	85	63.487	Saimiri_boliviensis_boliviensis
ENSCPBG00000019146	SNRNP48	91	72.848	ENSSHAG00000014483	SNRNP48	85	72.848	Sarcophilus_harrisii
ENSCPBG00000019146	SNRNP48	70	52.889	ENSSFOG00015006610	snrnp48	73	47.649	Scleropages_formosus
ENSCPBG00000019146	SNRNP48	77	52.227	ENSSDUG00000014953	snrnp48	82	48.000	Seriola_dumerili
ENSCPBG00000019146	SNRNP48	75	52.697	ENSSLDG00000005989	snrnp48	80	48.299	Seriola_lalandi_dorsalis
ENSCPBG00000019146	SNRNP48	96	77.532	ENSSPUG00000006257	SNRNP48	90	77.532	Sphenodon_punctatus
ENSCPBG00000019146	SNRNP48	75	50.410	ENSSPAG00000006454	snrnp48	82	45.545	Stegastes_partitus
ENSCPBG00000019146	SNRNP48	92	75.410	ENSTGUG00000007575	SNRNP48	100	73.030	Taeniopygia_guttata
ENSCPBG00000019146	SNRNP48	63	54.229	ENSTRUG00000007031	snrnp48	84	46.479	Takifugu_rubripes
ENSCPBG00000019146	SNRNP48	88	44.484	ENSTNIG00000012977	-	81	44.484	Tetraodon_nigroviridis
ENSCPBG00000019146	SNRNP48	68	69.091	ENSTBEG00000015620	SNRNP48	64	69.091	Tupaia_belangeri
ENSCPBG00000019146	SNRNP48	90	66.780	ENSTTRG00000016715	SNRNP48	85	66.225	Tursiops_truncatus
ENSCPBG00000019146	SNRNP48	92	64.145	ENSUAMG00000003690	SNRNP48	85	64.145	Ursus_americanus
ENSCPBG00000019146	SNRNP48	91	65.552	ENSVPAG00000003557	SNRNP48	99	65.552	Vicugna_pacos
ENSCPBG00000019146	SNRNP48	92	64.803	ENSVVUG00000004996	SNRNP48	84	64.803	Vulpes_vulpes
ENSCPBG00000019146	SNRNP48	82	60.985	ENSXETG00000020447	snrnp48	86	58.086	Xenopus_tropicalis
ENSCPBG00000019146	SNRNP48	58	55.135	ENSXCOG00000004478	snrnp48	56	55.135	Xiphophorus_couchianus
ENSCPBG00000019146	SNRNP48	66	53.991	ENSXMAG00000013595	snrnp48	83	46.205	Xiphophorus_maculatus