EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000019363 (Gene tree)
Gene ID: 101933805
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 55266 bases
Position: chr19:7104279-7159544
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000027347	ResIII	PF04851.15	1.2e-08	1	1
ENSCPBP00000027351	ResIII	PF04851.15	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000032195	CHD5-202	6777	-	ENSCPBP00000027351	1858 (aa)	-	-
ENSCPBT00000032191	CHD5-201	6828	-	ENSCPBP00000027347	1821 (aa)	XP_005298480	UPI0003890DFE

Gene Model

Click here to download ENSCPBG00000019363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000019363	CHD5	98	70.460	ENSCPBG00000027716	-	88	71.279
ENSCPBG00000019363	CHD5	93	72.054	ENSCPBG00000011966	CHD3	99	72.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019363	CHD5	100	90.839	ENSG00000116254	CHD5	96	92.082	Homo_sapiens
ENSCPBG00000019363	CHD5	99	90.231	ENSAMEG00000009880	CHD5	94	90.340	Ailuropoda_melanoleuca
ENSCPBG00000019363	CHD5	99	77.862	ENSACIG00000012582	chd5	98	77.173	Amphilophus_citrinellus
ENSCPBG00000019363	CHD5	100	77.451	ENSAOCG00000020356	chd5	92	77.165	Amphiprion_ocellaris
ENSCPBG00000019363	CHD5	98	85.082	ENSAPLG00000015475	CHD5	94	84.603	Anas_platyrhynchos
ENSCPBG00000019363	CHD5	100	86.634	ENSACAG00000002441	CHD5	92	86.805	Anolis_carolinensis
ENSCPBG00000019363	CHD5	93	90.513	ENSANAG00000001078	CHD5	91	90.631	Aotus_nancymaae
ENSCPBG00000019363	CHD5	99	74.197	ENSACLG00000003012	chd5	96	73.979	Astatotilapia_calliptera
ENSCPBG00000019363	CHD5	96	79.208	ENSAMXG00000008921	chd5	99	78.548	Astyanax_mexicanus
ENSCPBG00000019363	CHD5	100	90.570	ENSBTAG00000040477	CHD5	100	90.680	Bos_taurus
ENSCPBG00000019363	CHD5	100	90.784	ENSCJAG00000000101	CHD5	93	90.894	Callithrix_jacchus
ENSCPBG00000019363	CHD5	100	90.730	ENSCAFG00000019545	CHD5	100	90.839	Canis_familiaris
ENSCPBG00000019363	CHD5	99	90.719	ENSCAFG00020008689	CHD5	90	90.829	Canis_lupus_dingo
ENSCPBG00000019363	CHD5	99	89.699	ENSCHIG00000015027	CHD5	91	89.808	Capra_hircus
ENSCPBG00000019363	CHD5	99	85.800	ENSTSYG00000033991	CHD5	93	85.792	Carlito_syrichta
ENSCPBG00000019363	CHD5	100	90.400	ENSCAPG00000009294	CHD5	94	90.510	Cavia_aperea
ENSCPBG00000019363	CHD5	100	90.455	ENSCPOG00000025080	CHD5	94	90.565	Cavia_porcellus
ENSCPBG00000019363	CHD5	100	90.730	ENSCCAG00000024756	CHD5	93	90.839	Cebus_capucinus
ENSCPBG00000019363	CHD5	100	91.004	ENSCATG00000043011	CHD5	94	91.114	Cercocebus_atys
ENSCPBG00000019363	CHD5	100	90.455	ENSCLAG00000010589	CHD5	94	90.565	Chinchilla_lanigera
ENSCPBG00000019363	CHD5	100	91.004	ENSCSAG00000000733	CHD5	93	91.114	Chlorocebus_sabaeus
ENSCPBG00000019363	CHD5	100	90.839	ENSCANG00000032302	CHD5	93	90.949	Colobus_angolensis_palliatus
ENSCPBG00000019363	CHD5	54	92.540	ENSCGRG00001011042	Chd5	94	92.641	Cricetulus_griseus_chok1gshd
ENSCPBG00000019363	CHD5	100	89.578	ENSCGRG00000011341	Chd5	94	89.687	Cricetulus_griseus_crigri
ENSCPBG00000019363	CHD5	98	67.761	ENSDARG00000025789	chd4b	92	68.030	Danio_rerio
ENSCPBG00000019363	CHD5	99	77.844	ENSDARG00000105083	chd5	100	78.576	Danio_rerio
ENSCPBG00000019363	CHD5	95	92.637	ENSDNOG00000046342	CHD5	93	86.224	Dasypus_novemcinctus
ENSCPBG00000019363	CHD5	100	90.461	ENSDORG00000005923	Chd5	94	90.570	Dipodomys_ordii
ENSCPBG00000019363	CHD5	99	88.852	ENSEASG00005021464	CHD5	88	97.605	Equus_asinus_asinus
ENSCPBG00000019363	CHD5	99	88.403	ENSECAG00000025043	CHD5	95	92.095	Equus_caballus
ENSCPBG00000019363	CHD5	75	95.814	ENSEEUG00000002772	CHD5	71	95.814	Erinaceus_europaeus
ENSCPBG00000019363	CHD5	93	82.609	ENSELUG00000010742	chd5	89	92.523	Esox_lucius
ENSCPBG00000019363	CHD5	100	90.510	ENSFCAG00000006319	CHD5	93	90.784	Felis_catus
ENSCPBG00000019363	CHD5	99	92.649	ENSFALG00000009740	CHD5	93	92.649	Ficedula_albicollis
ENSCPBG00000019363	CHD5	99	90.060	ENSFDAG00000012881	CHD5	92	89.972	Fukomys_damarensis
ENSCPBG00000019363	CHD5	100	93.191	ENSGALG00000000747	CHD5	93	93.081	Gallus_gallus
ENSCPBG00000019363	CHD5	59	81.574	ENSGACG00000004389	chd5	92	81.978	Gasterosteus_aculeatus
ENSCPBG00000019363	CHD5	100	94.237	ENSGAGG00000001590	CHD5	97	100.000	Gopherus_agassizii
ENSCPBG00000019363	CHD5	100	90.784	ENSGGOG00000000708	CHD5	94	90.894	Gorilla_gorilla
ENSCPBG00000019363	CHD5	99	75.847	ENSHBUG00000013453	chd5	96	75.628	Haplochromis_burtoni
ENSCPBG00000019363	CHD5	100	90.016	ENSHGLG00000018184	CHD5	96	90.126	Heterocephalus_glaber_female
ENSCPBG00000019363	CHD5	100	84.072	ENSHGLG00100013261	CHD5	93	82.595	Heterocephalus_glaber_male
ENSCPBG00000019363	CHD5	99	78.057	ENSIPUG00000005446	chd5	98	77.280	Ictalurus_punctatus
ENSCPBG00000019363	CHD5	100	90.784	ENSSTOG00000002778	CHD5	94	89.413	Ictidomys_tridecemlineatus
ENSCPBG00000019363	CHD5	100	89.742	ENSJJAG00000019072	Chd5	93	89.852	Jaculus_jaculus
ENSCPBG00000019363	CHD5	100	81.489	ENSLOCG00000004944	chd5	93	81.596	Lepisosteus_oculatus
ENSCPBG00000019363	CHD5	99	91.378	ENSLAFG00000006348	CHD5	94	91.433	Loxodonta_africana
ENSCPBG00000019363	CHD5	100	90.949	ENSMFAG00000033993	CHD5	100	91.059	Macaca_fascicularis
ENSCPBG00000019363	CHD5	100	90.894	ENSMMUG00000016838	CHD5	93	91.004	Macaca_mulatta
ENSCPBG00000019363	CHD5	100	90.949	ENSMNEG00000040044	CHD5	93	91.059	Macaca_nemestrina
ENSCPBG00000019363	CHD5	100	87.507	ENSMLEG00000039166	CHD5	94	87.615	Mandrillus_leucophaeus
ENSCPBG00000019363	CHD5	99	72.133	ENSMZEG00005000841	chd5	90	79.713	Maylandia_zebra
ENSCPBG00000019363	CHD5	99	93.085	ENSMGAG00000001055	CHD5	93	92.975	Meleagris_gallopavo
ENSCPBG00000019363	CHD5	99	90.995	ENSMICG00000017862	CHD5	93	91.129	Microcebus_murinus
ENSCPBG00000019363	CHD5	100	89.578	ENSMOCG00000011049	Chd5	93	89.687	Microtus_ochrogaster
ENSCPBG00000019363	CHD5	92	79.258	ENSMODG00000006294	CHD5	73	93.072	Monodelphis_domestica
ENSCPBG00000019363	CHD5	100	77.016	ENSMALG00000002831	chd5	96	76.765	Monopterus_albus
ENSCPBG00000019363	CHD5	100	89.413	MGP_CAROLIEiJ_G0026857	Chd5	93	89.523	Mus_caroli
ENSCPBG00000019363	CHD5	100	89.413	ENSMUSG00000005045	Chd5	93	89.523	Mus_musculus
ENSCPBG00000019363	CHD5	100	89.084	MGP_PahariEiJ_G0029205	Chd5	93	89.194	Mus_pahari
ENSCPBG00000019363	CHD5	100	89.358	MGP_SPRETEiJ_G0027850	Chd5	93	89.468	Mus_spretus
ENSCPBG00000019363	CHD5	100	87.228	ENSMPUG00000007122	CHD5	94	87.381	Mustela_putorius_furo
ENSCPBG00000019363	CHD5	99	89.127	ENSNGAG00000019812	Chd5	91	88.585	Nannospalax_galili
ENSCPBG00000019363	CHD5	100	88.481	ENSNLEG00000010320	CHD5	94	88.371	Nomascus_leucogenys
ENSCPBG00000019363	CHD5	87	88.235	ENSOPRG00000004304	CHD5	81	88.079	Ochotona_princeps
ENSCPBG00000019363	CHD5	100	90.510	ENSODEG00000010262	CHD5	94	90.620	Octodon_degus
ENSCPBG00000019363	CHD5	100	75.810	ENSONIG00000000619	chd5	95	75.416	Oreochromis_niloticus
ENSCPBG00000019363	CHD5	100	72.025	ENSOANG00000001819	CHD5	97	72.025	Ornithorhynchus_anatinus
ENSCPBG00000019363	CHD5	99	90.779	ENSOGAG00000005703	CHD5	93	90.889	Otolemur_garnettii
ENSCPBG00000019363	CHD5	98	89.368	ENSOARG00000013425	CHD5	92	89.480	Ovis_aries
ENSCPBG00000019363	CHD5	100	90.680	ENSPPAG00000034048	CHD5	94	90.789	Pan_paniscus
ENSCPBG00000019363	CHD5	100	89.852	ENSPPRG00000009453	CHD5	93	90.126	Panthera_pardus
ENSCPBG00000019363	CHD5	100	83.793	ENSPTIG00000013926	CHD5	94	84.125	Panthera_tigris_altaica
ENSCPBG00000019363	CHD5	100	90.680	ENSPTRG00000000075	CHD5	93	90.789	Pan_troglodytes
ENSCPBG00000019363	CHD5	100	91.004	ENSPANG00000006765	CHD5	93	91.114	Papio_anubis
ENSCPBG00000019363	CHD5	98	78.188	ENSPKIG00000004282	chd5	94	77.078	Paramormyrops_kingsleyae
ENSCPBG00000019363	CHD5	99	88.840	ENSPSIG00000006414	CHD5	97	89.309	Pelodiscus_sinensis
ENSCPBG00000019363	CHD5	67	92.421	ENSPEMG00000014799	Chd5	92	92.584	Peromyscus_maniculatus_bairdii
ENSCPBG00000019363	CHD5	100	91.827	ENSPCIG00000028310	CHD5	92	91.827	Phascolarctos_cinereus
ENSCPBG00000019363	CHD5	95	87.879	ENSPLAG00000005343	chd5	96	74.662	Poecilia_latipinna
ENSCPBG00000019363	CHD5	100	88.419	ENSPPYG00000001952	CHD5	94	88.255	Pongo_abelii
ENSCPBG00000019363	CHD5	100	91.004	ENSPCOG00000022930	CHD5	93	91.114	Propithecus_coquereli
ENSCPBG00000019363	CHD5	99	76.944	ENSPNYG00000003183	chd5	98	76.420	Pundamilia_nyererei
ENSCPBG00000019363	CHD5	100	89.194	ENSRNOG00000011268	Chd5	94	89.254	Rattus_norvegicus
ENSCPBG00000019363	CHD5	99	92.882	ENSRBIG00000032140	CHD5	94	93.018	Rhinopithecus_bieti
ENSCPBG00000019363	CHD5	100	90.730	ENSRROG00000041146	CHD5	93	90.839	Rhinopithecus_roxellana
ENSCPBG00000019363	CHD5	100	86.945	ENSSBOG00000001955	CHD5	99	90.569	Saimiri_boliviensis_boliviensis
ENSCPBG00000019363	CHD5	99	86.027	ENSSHAG00000018641	CHD5	96	86.137	Sarcophilus_harrisii
ENSCPBG00000019363	CHD5	100	77.289	ENSSFOG00015006296	chd5	89	86.770	Scleropages_formosus
ENSCPBG00000019363	CHD5	99	77.300	ENSSDUG00000017526	chd5	92	91.549	Seriola_dumerili
ENSCPBG00000019363	CHD5	99	83.882	ENSSPUG00000010622	CHD5	94	83.025	Sphenodon_punctatus
ENSCPBG00000019363	CHD5	100	90.615	ENSSSCG00000003366	CHD5	100	90.724	Sus_scrofa
ENSCPBG00000019363	CHD5	97	85.494	ENSTGUG00000002634	-	96	85.494	Taeniopygia_guttata
ENSCPBG00000019363	CHD5	55	80.318	ENSTNIG00000004346	chd5	99	80.716	Tetraodon_nigroviridis
ENSCPBG00000019363	CHD5	100	88.700	ENSTTRG00000010468	CHD5	93	88.810	Tursiops_truncatus
ENSCPBG00000019363	CHD5	99	90.884	ENSUAMG00000024509	CHD5	93	90.994	Ursus_americanus
ENSCPBG00000019363	CHD5	99	86.099	ENSUMAG00000024173	CHD5	95	86.052	Ursus_maritimus
ENSCPBG00000019363	CHD5	99	89.572	ENSVVUG00000026480	CHD5	92	93.496	Vulpes_vulpes
ENSCPBG00000019363	CHD5	99	80.748	ENSXETG00000002904	chd5	96	80.043	Xenopus_tropicalis
ENSCPBG00000019363	CHD5	59	83.871	ENSXCOG00000014202	chd5	94	83.871	Xiphophorus_couchianus