EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000019404 (Gene tree)
Gene ID: 101947031
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 14957 bases
Position: chr19:8632906-8647862
Accession: 29207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000027423	B3_4	PF03483.17	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000032274	LRRC47-201	1767	-	ENSCPBP00000027423	588 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000019404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019404	LRRC47	98	62.563	ENSG00000130764	LRRC47	99	62.563	Homo_sapiens
ENSCPBG00000019404	LRRC47	98	51.789	ENSAPOG00000019553	lrrc47	99	51.689	Acanthochromis_polyacanthus
ENSCPBG00000019404	LRRC47	79	63.656	ENSAMEG00000009152	LRRC47	100	64.086	Ailuropoda_melanoleuca
ENSCPBG00000019404	LRRC47	65	75.521	ENSAPLG00000003167	LRRC47	99	75.521	Anas_platyrhynchos
ENSCPBG00000019404	LRRC47	64	69.895	ENSACAG00000008267	LRRC47	100	69.895	Anolis_carolinensis
ENSCPBG00000019404	LRRC47	98	61.720	ENSANAG00000025576	LRRC47	99	61.720	Aotus_nancymaae
ENSCPBG00000019404	LRRC47	98	60.371	ENSBTAG00000004738	LRRC47	99	60.500	Bos_taurus
ENSCPBG00000019404	LRRC47	95	61.431	ENSCAFG00000019492	LRRC47	99	61.730	Canis_familiaris
ENSCPBG00000019404	LRRC47	100	61.231	ENSCAFG00020009667	LRRC47	99	62.563	Canis_lupus_dingo
ENSCPBG00000019404	LRRC47	100	60.596	ENSCHIG00000022607	LRRC47	99	61.194	Capra_hircus
ENSCPBG00000019404	LRRC47	95	61.565	ENSTSYG00000009326	LRRC47	96	61.285	Carlito_syrichta
ENSCPBG00000019404	LRRC47	64	61.905	ENSCAPG00000016517	LRRC47	99	63.228	Cavia_aperea
ENSCPBG00000019404	LRRC47	99	59.536	ENSCPOG00000014931	LRRC47	96	59.867	Cavia_porcellus
ENSCPBG00000019404	LRRC47	98	62.057	ENSCCAG00000024895	LRRC47	99	62.057	Cebus_capucinus
ENSCPBG00000019404	LRRC47	98	62.732	ENSCATG00000029337	LRRC47	99	62.732	Cercocebus_atys
ENSCPBG00000019404	LRRC47	98	61.186	ENSCLAG00000006093	LRRC47	99	61.356	Chinchilla_lanigera
ENSCPBG00000019404	LRRC47	98	62.563	ENSCSAG00000000727	LRRC47	99	62.563	Chlorocebus_sabaeus
ENSCPBG00000019404	LRRC47	78	64.516	ENSCANG00000030701	LRRC47	96	64.516	Colobus_angolensis_palliatus
ENSCPBG00000019404	LRRC47	98	60.339	ENSCGRG00001015159	Lrrc47	90	59.933	Cricetulus_griseus_chok1gshd
ENSCPBG00000019404	LRRC47	64	63.757	ENSCGRG00000017336	Lrrc47	99	63.032	Cricetulus_griseus_crigri
ENSCPBG00000019404	LRRC47	99	49.916	ENSCSEG00000006217	lrrc47	96	50.588	Cynoglossus_semilaevis
ENSCPBG00000019404	LRRC47	64	65.608	ENSDORG00000016594	Lrrc47	100	65.608	Dipodomys_ordii
ENSCPBG00000019404	LRRC47	100	62.252	ENSEASG00005021788	LRRC47	99	62.252	Equus_asinus_asinus
ENSCPBG00000019404	LRRC47	98	63.176	ENSECAG00000022472	LRRC47	91	62.645	Equus_caballus
ENSCPBG00000019404	LRRC47	98	49.664	ENSELUG00000017544	lrrc47	98	48.926	Esox_lucius
ENSCPBG00000019404	LRRC47	96	59.619	ENSFCAG00000011632	LRRC47	99	59.589	Felis_catus
ENSCPBG00000019404	LRRC47	73	72.222	ENSFALG00000009631	LRRC47	99	73.913	Ficedula_albicollis
ENSCPBG00000019404	LRRC47	99	50.000	ENSGMOG00000015674	lrrc47	99	50.168	Gadus_morhua
ENSCPBG00000019404	LRRC47	99	68.528	ENSGALG00000050995	LRRC47	99	69.374	Gallus_gallus
ENSCPBG00000019404	LRRC47	98	51.993	ENSGACG00000005550	lrrc47	99	51.010	Gasterosteus_aculeatus
ENSCPBG00000019404	LRRC47	99	91.806	ENSGAGG00000022584	LRRC47	99	91.806	Gopherus_agassizii
ENSCPBG00000019404	LRRC47	98	62.901	ENSGGOG00000015571	LRRC47	99	62.901	Gorilla_gorilla
ENSCPBG00000019404	LRRC47	98	59.797	ENSHGLG00000018278	LRRC47	95	59.797	Heterocephalus_glaber_female
ENSCPBG00000019404	LRRC47	69	62.469	ENSHGLG00100008507	LRRC47	100	62.469	Heterocephalus_glaber_male
ENSCPBG00000019404	LRRC47	99	50.924	ENSHCOG00000006348	lrrc47	98	50.924	Hippocampus_comes
ENSCPBG00000019404	LRRC47	100	60.963	ENSSTOG00000027559	LRRC47	99	61.296	Ictidomys_tridecemlineatus
ENSCPBG00000019404	LRRC47	98	63.238	ENSJJAG00000017474	Lrrc47	97	63.079	Jaculus_jaculus
ENSCPBG00000019404	LRRC47	98	52.013	ENSKMAG00000003414	lrrc47	99	52.013	Kryptolebias_marmoratus
ENSCPBG00000019404	LRRC47	100	63.894	ENSLAFG00000011657	LRRC47	100	63.894	Loxodonta_africana
ENSCPBG00000019404	LRRC47	98	49.331	ENSMFAG00000045730	LRRC47	88	63.180	Macaca_fascicularis
ENSCPBG00000019404	LRRC47	98	62.563	ENSMNEG00000042488	LRRC47	99	62.063	Macaca_nemestrina
ENSCPBG00000019404	LRRC47	76	63.736	ENSMLEG00000043735	LRRC47	95	62.447	Mandrillus_leucophaeus
ENSCPBG00000019404	LRRC47	98	60.678	ENSMAUG00000021337	Lrrc47	97	60.678	Mesocricetus_auratus
ENSCPBG00000019404	LRRC47	98	61.383	ENSMICG00000026816	LRRC47	99	61.383	Microcebus_murinus
ENSCPBG00000019404	LRRC47	98	60.000	ENSMOCG00000021279	Lrrc47	99	60.678	Microtus_ochrogaster
ENSCPBG00000019404	LRRC47	99	51.939	ENSMMOG00000017007	lrrc47	99	51.939	Mola_mola
ENSCPBG00000019404	LRRC47	99	64.418	ENSMODG00000006554	LRRC47	98	64.418	Monodelphis_domestica
ENSCPBG00000019404	LRRC47	98	61.252	MGP_CAROLIEiJ_G0026864	Lrrc47	99	60.833	Mus_caroli
ENSCPBG00000019404	LRRC47	98	61.252	ENSMUSG00000029028	Lrrc47	99	60.833	Mus_musculus
ENSCPBG00000019404	LRRC47	98	60.237	MGP_PahariEiJ_G0029212	Lrrc47	99	60.500	Mus_pahari
ENSCPBG00000019404	LRRC47	98	61.214	MGP_SPRETEiJ_G0027857	Lrrc47	99	60.797	Mus_spretus
ENSCPBG00000019404	LRRC47	65	64.921	ENSMPUG00000007321	LRRC47	75	65.707	Mustela_putorius_furo
ENSCPBG00000019404	LRRC47	98	60.169	ENSNGAG00000022153	Lrrc47	99	60.235	Nannospalax_galili
ENSCPBG00000019404	LRRC47	98	61.856	ENSNLEG00000008131	LRRC47	99	61.856	Nomascus_leucogenys
ENSCPBG00000019404	LRRC47	85	62.926	ENSODEG00000010882	LRRC47	93	62.525	Octodon_degus
ENSCPBG00000019404	LRRC47	96	51.652	ENSORLG00000002532	lrrc47	100	51.652	Oryzias_latipes
ENSCPBG00000019404	LRRC47	99	51.771	ENSORLG00020019601	lrrc47	99	51.771	Oryzias_latipes_hni
ENSCPBG00000019404	LRRC47	99	51.771	ENSORLG00015014040	lrrc47	99	51.771	Oryzias_latipes_hsok
ENSCPBG00000019404	LRRC47	99	51.265	ENSOMEG00000008989	lrrc47	99	50.333	Oryzias_melastigma
ENSCPBG00000019404	LRRC47	99	60.535	ENSOGAG00000001553	LRRC47	99	60.535	Otolemur_garnettii
ENSCPBG00000019404	LRRC47	98	58.824	ENSOARG00000015290	LRRC47	99	59.302	Ovis_aries
ENSCPBG00000019404	LRRC47	75	64.334	ENSPPAG00000036370	-	96	64.080	Pan_paniscus
ENSCPBG00000019404	LRRC47	99	60.504	ENSPPRG00000005261	LRRC47	99	60.631	Panthera_pardus
ENSCPBG00000019404	LRRC47	98	62.732	ENSPTRG00000000068	LRRC47	99	62.732	Pan_troglodytes
ENSCPBG00000019404	LRRC47	98	62.395	ENSPANG00000012437	LRRC47	99	62.395	Papio_anubis
ENSCPBG00000019404	LRRC47	64	93.386	ENSPSIG00000004196	LRRC47	100	93.386	Pelodiscus_sinensis
ENSCPBG00000019404	LRRC47	64	64.628	ENSPEMG00000021068	Lrrc47	99	64.628	Peromyscus_maniculatus_bairdii
ENSCPBG00000019404	LRRC47	98	67.627	ENSPCIG00000003638	LRRC47	98	67.454	Phascolarctos_cinereus
ENSCPBG00000019404	LRRC47	94	50.261	ENSPFOG00000000992	lrrc47	96	50.261	Poecilia_formosa
ENSCPBG00000019404	LRRC47	99	51.661	ENSPLAG00000008077	lrrc47	99	51.661	Poecilia_latipinna
ENSCPBG00000019404	LRRC47	99	51.901	ENSPMEG00000007367	lrrc47	99	51.661	Poecilia_mexicana
ENSCPBG00000019404	LRRC47	98	62.732	ENSPPYG00000001960	LRRC47	99	62.732	Pongo_abelii
ENSCPBG00000019404	LRRC47	98	61.889	ENSPCOG00000019161	LRRC47	99	61.398	Propithecus_coquereli
ENSCPBG00000019404	LRRC47	98	60.339	ENSPVAG00000009839	LRRC47	99	60.339	Pteropus_vampyrus
ENSCPBG00000019404	LRRC47	98	54.300	ENSPNAG00000017982	lrrc47	98	54.237	Pygocentrus_nattereri
ENSCPBG00000019404	LRRC47	99	59.900	ENSRNOG00000024796	Lrrc47	99	61.065	Rattus_norvegicus
ENSCPBG00000019404	LRRC47	98	62.563	ENSRBIG00000019437	LRRC47	99	62.563	Rhinopithecus_bieti
ENSCPBG00000019404	LRRC47	98	62.563	ENSRROG00000043182	LRRC47	99	62.563	Rhinopithecus_roxellana
ENSCPBG00000019404	LRRC47	77	64.989	ENSSBOG00000026334	LRRC47	92	64.989	Saimiri_boliviensis_boliviensis
ENSCPBG00000019404	LRRC47	98	56.303	ENSSHAG00000007360	LRRC47	99	56.312	Sarcophilus_harrisii
ENSCPBG00000019404	LRRC47	99	52.445	ENSSMAG00000009344	lrrc47	99	52.108	Scophthalmus_maximus
ENSCPBG00000019404	LRRC47	98	51.525	ENSSDUG00000014618	lrrc47	99	51.597	Seriola_dumerili
ENSCPBG00000019404	LRRC47	98	52.277	ENSSLDG00000018908	lrrc47	99	51.672	Seriola_lalandi_dorsalis
ENSCPBG00000019404	LRRC47	98	72.804	ENSSPUG00000010277	LRRC47	99	71.642	Sphenodon_punctatus
ENSCPBG00000019404	LRRC47	98	51.678	ENSSPAG00000005188	lrrc47	99	51.678	Stegastes_partitus
ENSCPBG00000019404	LRRC47	100	62.396	ENSSSCG00000039516	LRRC47	99	62.396	Sus_scrofa
ENSCPBG00000019404	LRRC47	70	71.046	ENSTGUG00000002737	LRRC47	100	69.830	Taeniopygia_guttata
ENSCPBG00000019404	LRRC47	99	51.010	ENSTRUG00000017696	lrrc47	99	50.590	Takifugu_rubripes
ENSCPBG00000019404	LRRC47	99	49.748	ENSTNIG00000010923	lrrc47	99	49.327	Tetraodon_nigroviridis
ENSCPBG00000019404	LRRC47	98	62.226	ENSTTRG00000011751	LRRC47	99	62.226	Tursiops_truncatus
ENSCPBG00000019404	LRRC47	90	64.595	ENSUAMG00000012080	LRRC47	97	65.348	Ursus_americanus
ENSCPBG00000019404	LRRC47	64	66.491	ENSUMAG00000010781	LRRC47	80	67.546	Ursus_maritimus
ENSCPBG00000019404	LRRC47	92	61.255	ENSVVUG00000027118	LRRC47	89	61.808	Vulpes_vulpes
ENSCPBG00000019404	LRRC47	99	60.000	ENSXETG00000006029	lrrc47	99	60.201	Xenopus_tropicalis
ENSCPBG00000019404	LRRC47	98	51.338	ENSXCOG00000002813	lrrc47	98	51.338	Xiphophorus_couchianus
ENSCPBG00000019404	LRRC47	98	51.342	ENSXMAG00000019386	lrrc47	99	51.174	Xiphophorus_maculatus