EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000019407 (Gene tree)
Gene ID: 101941248
Gene Symbol: LARP4
Alias: PP13296
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 38979 bases
Position: chrKK083093.1:411084-450062
Accession: 24320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000027422	La	PF05383.17	3.8e-16	1	1
ENSCPBP00000027424	La	PF05383.17	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000032273	LARP4-201	2418	-	ENSCPBP00000027422	805 (aa)	-	UPI000388AD70
ENSCPBT00000032275	LARP4-202	2364	-	ENSCPBP00000027424	787 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000019407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000019407	LARP4	90	38.360	ENSCPBG00000017063	LARP4B	96	38.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019407	LARP4	91	71.798	ENSG00000161813	LARP4	100	81.111	Homo_sapiens
ENSCPBG00000019407	LARP4	90	44.850	ENSAPOG00000021331	larp4ab	99	44.850	Acanthochromis_polyacanthus
ENSCPBG00000019407	LARP4	90	51.213	ENSAPOG00000007142	larp4aa	95	51.086	Acanthochromis_polyacanthus
ENSCPBG00000019407	LARP4	90	71.995	ENSAMEG00000001275	LARP4	100	72.268	Ailuropoda_melanoleuca
ENSCPBG00000019407	LARP4	90	51.461	ENSAOCG00000002408	larp4aa	95	50.699	Amphiprion_ocellaris
ENSCPBG00000019407	LARP4	90	44.689	ENSAOCG00000006387	larp4ab	99	44.228	Amphiprion_ocellaris
ENSCPBG00000019407	LARP4	90	51.207	ENSAPEG00000019058	larp4aa	95	50.445	Amphiprion_percula
ENSCPBG00000019407	LARP4	90	43.726	ENSATEG00000001018	larp4ab	99	43.718	Anabas_testudineus
ENSCPBG00000019407	LARP4	92	51.241	ENSATEG00000020715	larp4aa	98	51.304	Anabas_testudineus
ENSCPBG00000019407	LARP4	90	86.207	ENSAPLG00000013661	LARP4	99	86.207	Anas_platyrhynchos
ENSCPBG00000019407	LARP4	91	77.291	ENSACAG00000017133	LARP4	97	77.565	Anolis_carolinensis
ENSCPBG00000019407	LARP4	91	69.553	ENSANAG00000029342	LARP4	98	80.000	Aotus_nancymaae
ENSCPBG00000019407	LARP4	90	47.104	ENSAMXG00000001515	larp4ab	95	48.168	Astyanax_mexicanus
ENSCPBG00000019407	LARP4	90	51.484	ENSAMXG00000036493	larp4aa	94	52.083	Astyanax_mexicanus
ENSCPBG00000019407	LARP4	91	71.275	ENSBTAG00000017164	LARP4	100	71.544	Bos_taurus
ENSCPBG00000019407	LARP4	84	76.471	ENSCJAG00000021131	LARP4	98	80.533	Callithrix_jacchus
ENSCPBG00000019407	LARP4	91	71.701	ENSCAFG00000008174	LARP4	100	72.169	Canis_familiaris
ENSCPBG00000019407	LARP4	91	71.973	ENSCAFG00020014554	LARP4	100	74.830	Canis_lupus_dingo
ENSCPBG00000019407	LARP4	91	70.872	ENSCHIG00000025965	LARP4	100	71.141	Capra_hircus
ENSCPBG00000019407	LARP4	91	72.343	ENSTSYG00000004342	LARP4	98	81.333	Carlito_syrichta
ENSCPBG00000019407	LARP4	89	56.374	ENSCAPG00000012942	LARP4	100	55.666	Cavia_aperea
ENSCPBG00000019407	LARP4	91	66.076	ENSCPOG00000020519	LARP4	100	66.349	Cavia_porcellus
ENSCPBG00000019407	LARP4	91	70.300	ENSCCAG00000024439	LARP4	98	80.000	Cebus_capucinus
ENSCPBG00000019407	LARP4	90	70.055	ENSCATG00000044528	LARP4	100	70.467	Cercocebus_atys
ENSCPBG00000019407	LARP4	90	68.989	ENSCLAG00000001829	LARP4	100	69.262	Chinchilla_lanigera
ENSCPBG00000019407	LARP4	50	77.695	ENSCHOG00000010490	-	59	77.695	Choloepus_hoffmanni
ENSCPBG00000019407	LARP4	91	64.120	ENSCANG00000033097	-	100	72.075	Colobus_angolensis_palliatus
ENSCPBG00000019407	LARP4	91	72.071	ENSCANG00000029159	-	98	81.600	Colobus_angolensis_palliatus
ENSCPBG00000019407	LARP4	91	69.932	ENSCGRG00001010818	Larp4	100	69.619	Cricetulus_griseus_chok1gshd
ENSCPBG00000019407	LARP4	90	69.780	ENSCGRG00000009382	Larp4	100	69.464	Cricetulus_griseus_crigri
ENSCPBG00000019407	LARP4	90	49.874	ENSCSEG00000001963	larp4aa	96	49.071	Cynoglossus_semilaevis
ENSCPBG00000019407	LARP4	52	54.023	ENSCSEG00000003240	larp4ab	92	44.365	Cynoglossus_semilaevis
ENSCPBG00000019407	LARP4	92	49.250	ENSCVAG00000005488	larp4aa	98	49.317	Cyprinodon_variegatus
ENSCPBG00000019407	LARP4	91	48.642	ENSDARG00000074979	larp4ab	85	78.808	Danio_rerio
ENSCPBG00000019407	LARP4	92	49.565	ENSDARG00000078401	larp4aa	97	49.749	Danio_rerio
ENSCPBG00000019407	LARP4	91	71.117	ENSDNOG00000038525	LARP4	100	72.245	Dasypus_novemcinctus
ENSCPBG00000019407	LARP4	90	71.229	ENSDORG00000004013	Larp4	100	70.769	Dipodomys_ordii
ENSCPBG00000019407	LARP4	65	64.312	ENSETEG00000011683	LARP4	74	64.312	Echinops_telfairi
ENSCPBG00000019407	LARP4	68	39.310	ENSEBUG00000010394	LARP4	89	39.551	Eptatretus_burgeri
ENSCPBG00000019407	LARP4	67	42.088	ENSEBUG00000004426	LARP4	98	41.286	Eptatretus_burgeri
ENSCPBG00000019407	LARP4	90	72.714	ENSEASG00005004356	LARP4	100	79.828	Equus_asinus_asinus
ENSCPBG00000019407	LARP4	91	73.605	ENSECAG00000012479	LARP4	100	73.878	Equus_caballus
ENSCPBG00000019407	LARP4	71	89.744	ENSEEUG00000000316	LARP4	76	89.744	Erinaceus_europaeus
ENSCPBG00000019407	LARP4	60	78.319	ENSELUG00000018650	larp4ab	85	75.745	Esox_lucius
ENSCPBG00000019407	LARP4	79	61.097	ENSELUG00000000395	larp4aa	96	45.956	Esox_lucius
ENSCPBG00000019407	LARP4	91	73.061	ENSFCAG00000031897	LARP4	98	81.600	Felis_catus
ENSCPBG00000019407	LARP4	79	82.595	ENSFALG00000002114	LARP4	99	82.897	Ficedula_albicollis
ENSCPBG00000019407	LARP4	91	70.436	ENSFDAG00000006406	-	100	70.708	Fukomys_damarensis
ENSCPBG00000019407	LARP4	90	50.254	ENSFHEG00000004338	larp4aa	95	50.127	Fundulus_heteroclitus
ENSCPBG00000019407	LARP4	90	44.110	ENSFHEG00000013854	larp4ab	99	43.586	Fundulus_heteroclitus
ENSCPBG00000019407	LARP4	92	49.052	ENSGMOG00000008246	larp4aa	98	49.558	Gadus_morhua
ENSCPBG00000019407	LARP4	86	82.328	ENSGALG00000042122	LARP4	93	82.328	Gallus_gallus
ENSCPBG00000019407	LARP4	89	45.204	ENSGAFG00000021777	larp4ab	99	44.137	Gambusia_affinis
ENSCPBG00000019407	LARP4	90	45.478	ENSGACG00000000680	larp4ab	99	46.023	Gasterosteus_aculeatus
ENSCPBG00000019407	LARP4	92	50.501	ENSGACG00000008381	larp4aa	99	67.196	Gasterosteus_aculeatus
ENSCPBG00000019407	LARP4	91	96.296	ENSGAGG00000006969	LARP4	100	96.296	Gopherus_agassizii
ENSCPBG00000019407	LARP4	82	79.478	ENSGGOG00000015230	LARP4	100	79.478	Gorilla_gorilla
ENSCPBG00000019407	LARP4	83	70.536	ENSHGLG00000005513	-	100	70.982	Heterocephalus_glaber_female
ENSCPBG00000019407	LARP4	56	60.175	ENSHGLG00000010979	-	93	64.509	Heterocephalus_glaber_female
ENSCPBG00000019407	LARP4	77	66.400	ENSHGLG00000013875	-	99	64.583	Heterocephalus_glaber_female
ENSCPBG00000019407	LARP4	90	67.077	ENSHGLG00100011678	-	100	66.393	Heterocephalus_glaber_male
ENSCPBG00000019407	LARP4	56	60.175	ENSHGLG00100002832	-	93	64.509	Heterocephalus_glaber_male
ENSCPBG00000019407	LARP4	91	70.461	ENSHGLG00100016984	-	100	70.867	Heterocephalus_glaber_male
ENSCPBG00000019407	LARP4	90	42.595	ENSHCOG00000020857	larp4ab	99	42.444	Hippocampus_comes
ENSCPBG00000019407	LARP4	90	50.064	ENSHCOG00000015951	larp4aa	95	49.936	Hippocampus_comes
ENSCPBG00000019407	LARP4	90	51.086	ENSIPUG00000007514	larp4aa	95	51.157	Ictalurus_punctatus
ENSCPBG00000019407	LARP4	91	47.745	ENSIPUG00000021659	larp4ab	100	47.410	Ictalurus_punctatus
ENSCPBG00000019407	LARP4	91	72.381	ENSSTOG00000003553	LARP4	100	72.343	Ictidomys_tridecemlineatus
ENSCPBG00000019407	LARP4	90	45.490	ENSKMAG00000018556	larp4ab	99	45.157	Kryptolebias_marmoratus
ENSCPBG00000019407	LARP4	90	51.154	ENSKMAG00000006800	larp4aa	96	51.008	Kryptolebias_marmoratus
ENSCPBG00000019407	LARP4	90	44.545	ENSLBEG00000019306	larp4ab	99	44.186	Labrus_bergylta
ENSCPBG00000019407	LARP4	90	50.877	ENSLBEG00000014537	larp4aa	94	50.756	Labrus_bergylta
ENSCPBG00000019407	LARP4	90	63.102	ENSLACG00000019090	LARP4	99	63.017	Latimeria_chalumnae
ENSCPBG00000019407	LARP4	92	54.130	ENSLOCG00000007113	larp4ab	96	54.442	Lepisosteus_oculatus
ENSCPBG00000019407	LARP4	91	71.973	ENSLAFG00000005160	LARP4	100	71.662	Loxodonta_africana
ENSCPBG00000019407	LARP4	84	77.509	ENSMFAG00000043681	LARP4	98	81.867	Macaca_fascicularis
ENSCPBG00000019407	LARP4	84	77.509	ENSMMUG00000008172	LARP4	100	81.852	Macaca_mulatta
ENSCPBG00000019407	LARP4	82	61.062	ENSMNEG00000037799	-	99	65.775	Macaca_nemestrina
ENSCPBG00000019407	LARP4	84	70.796	ENSMNEG00000034602	LARP4	100	71.342	Macaca_nemestrina
ENSCPBG00000019407	LARP4	91	71.935	ENSMLEG00000039661	LARP4	98	81.600	Mandrillus_leucophaeus
ENSCPBG00000019407	LARP4	90	50.444	ENSMAMG00000011206	larp4aa	95	50.444	Mastacembelus_armatus
ENSCPBG00000019407	LARP4	90	43.774	ENSMAMG00000002616	larp4ab	99	44.174	Mastacembelus_armatus
ENSCPBG00000019407	LARP4	86	83.238	ENSMGAG00000010598	LARP4	93	83.095	Meleagris_gallopavo
ENSCPBG00000019407	LARP4	69	86.047	ENSMICG00000012388	-	99	86.047	Microcebus_murinus
ENSCPBG00000019407	LARP4	91	65.850	ENSMICG00000030156	-	100	65.531	Microcebus_murinus
ENSCPBG00000019407	LARP4	91	69.932	ENSMOCG00000020635	Larp4	100	69.932	Microtus_ochrogaster
ENSCPBG00000019407	LARP4	90	49.290	ENSMMOG00000004785	larp4aa	98	48.250	Mola_mola
ENSCPBG00000019407	LARP4	90	42.668	ENSMMOG00000021861	larp4ab	96	52.320	Mola_mola
ENSCPBG00000019407	LARP4	86	60.581	MGP_CAROLIEiJ_G0020281	Larp4	85	80.303	Mus_caroli
ENSCPBG00000019407	LARP4	91	69.577	ENSMUSG00000023025	Larp4	100	69.850	Mus_musculus
ENSCPBG00000019407	LARP4	91	69.577	MGP_PahariEiJ_G0020284	Larp4	100	69.262	Mus_pahari
ENSCPBG00000019407	LARP4	90	72.230	ENSMPUG00000008706	LARP4	97	73.361	Mustela_putorius_furo
ENSCPBG00000019407	LARP4	91	69.837	ENSMLUG00000012513	-	100	71.370	Myotis_lucifugus
ENSCPBG00000019407	LARP4	91	69.482	ENSNGAG00000001577	-	100	69.168	Nannospalax_galili
ENSCPBG00000019407	LARP4	92	49.178	ENSNBRG00000011292	larp4aa	97	49.000	Neolamprologus_brichardi
ENSCPBG00000019407	LARP4	91	72.480	ENSNLEG00000017798	LARP4	100	81.852	Nomascus_leucogenys
ENSCPBG00000019407	LARP4	62	62.550	ENSOPRG00000004592	-	79	62.550	Ochotona_princeps
ENSCPBG00000019407	LARP4	90	68.088	ENSODEG00000009770	LARP4	100	68.363	Octodon_degus
ENSCPBG00000019407	LARP4	90	43.890	ENSONIG00000019124	larp4ab	100	43.025	Oreochromis_niloticus
ENSCPBG00000019407	LARP4	90	49.550	ENSONIG00000011895	larp4aa	99	50.064	Oreochromis_niloticus
ENSCPBG00000019407	LARP4	67	76.697	ENSOANG00000004373	LARP4	98	76.697	Ornithorhynchus_anatinus
ENSCPBG00000019407	LARP4	91	70.014	ENSOCUG00000026872	-	100	71.020	Oryctolagus_cuniculus
ENSCPBG00000019407	LARP4	91	71.156	ENSOCUG00000021417	-	100	70.748	Oryctolagus_cuniculus
ENSCPBG00000019407	LARP4	90	52.005	ENSORLG00000006758	larp4aa	95	51.157	Oryzias_latipes
ENSCPBG00000019407	LARP4	90	52.073	ENSORLG00020010258	larp4aa	95	51.102	Oryzias_latipes_hni
ENSCPBG00000019407	LARP4	90	51.671	ENSORLG00015002292	larp4aa	95	51.157	Oryzias_latipes_hsok
ENSCPBG00000019407	LARP4	90	51.129	ENSOMEG00000019749	larp4aa	97	67.213	Oryzias_melastigma
ENSCPBG00000019407	LARP4	64	73.004	ENSOGAG00000001415	LARP4	100	73.574	Otolemur_garnettii
ENSCPBG00000019407	LARP4	91	70.604	ENSOARG00000017702	LARP4	100	70.872	Ovis_aries
ENSCPBG00000019407	LARP4	81	77.629	ENSPPAG00000035100	LARP4	99	80.297	Pan_paniscus
ENSCPBG00000019407	LARP4	57	61.388	ENSPPAG00000039122	-	96	65.707	Pan_paniscus
ENSCPBG00000019407	LARP4	91	72.789	ENSPPRG00000004522	LARP4	98	81.600	Panthera_pardus
ENSCPBG00000019407	LARP4	91	72.789	ENSPTIG00000015617	LARP4	98	81.600	Panthera_tigris_altaica
ENSCPBG00000019407	LARP4	91	71.798	ENSPTRG00000004935	LARP4	100	81.481	Pan_troglodytes
ENSCPBG00000019407	LARP4	57	60.521	ENSPTRG00000045907	-	99	68.548	Pan_troglodytes
ENSCPBG00000019407	LARP4	91	71.757	ENSPANG00000022964	LARP4	100	81.852	Papio_anubis
ENSCPBG00000019407	LARP4	91	49.569	ENSPKIG00000005950	larp4ab	100	49.010	Paramormyrops_kingsleyae
ENSCPBG00000019407	LARP4	90	92.149	ENSPSIG00000015867	LARP4	99	91.598	Pelodiscus_sinensis
ENSCPBG00000019407	LARP4	90	65.353	ENSPEMG00000018433	Larp4	99	65.306	Peromyscus_maniculatus_bairdii
ENSCPBG00000019407	LARP4	91	77.049	ENSPCIG00000000384	LARP4	100	77.049	Phascolarctos_cinereus
ENSCPBG00000019407	LARP4	89	46.021	ENSPFOG00000009764	larp4ab	99	45.563	Poecilia_formosa
ENSCPBG00000019407	LARP4	92	50.491	ENSPFOG00000013148	larp4aa	99	49.802	Poecilia_formosa
ENSCPBG00000019407	LARP4	89	46.093	ENSPLAG00000008502	larp4ab	99	45.430	Poecilia_latipinna
ENSCPBG00000019407	LARP4	90	51.259	ENSPLAG00000013626	larp4aa	98	50.184	Poecilia_latipinna
ENSCPBG00000019407	LARP4	89	45.839	ENSPMEG00000002720	larp4ab	99	45.106	Poecilia_mexicana
ENSCPBG00000019407	LARP4	92	50.369	ENSPMEG00000014271	larp4aa	98	50.185	Poecilia_mexicana
ENSCPBG00000019407	LARP4	90	51.980	ENSPREG00000022597	larp4aa	98	50.677	Poecilia_reticulata
ENSCPBG00000019407	LARP4	65	75.763	ENSPPYG00000004512	-	100	76.336	Pongo_abelii
ENSCPBG00000019407	LARP4	84	66.176	ENSPCAG00000003671	LARP4	99	65.243	Procavia_capensis
ENSCPBG00000019407	LARP4	79	81.016	ENSPCOG00000026291	LARP4	98	82.222	Propithecus_coquereli
ENSCPBG00000019407	LARP4	84	62.887	ENSPVAG00000016840	LARP4	91	64.559	Pteropus_vampyrus
ENSCPBG00000019407	LARP4	88	50.856	ENSPNAG00000024770	larp4aa	96	51.039	Pygocentrus_nattereri
ENSCPBG00000019407	LARP4	91	48.780	ENSPNAG00000014478	larp4ab	100	49.294	Pygocentrus_nattereri
ENSCPBG00000019407	LARP4	82	75.425	ENSRBIG00000038857	-	99	78.523	Rhinopithecus_bieti
ENSCPBG00000019407	LARP4	82	65.283	ENSRBIG00000036890	-	100	65.283	Rhinopithecus_bieti
ENSCPBG00000019407	LARP4	91	64.169	ENSRROG00000025487	-	100	65.283	Rhinopithecus_roxellana
ENSCPBG00000019407	LARP4	91	71.081	ENSRROG00000042764	-	98	80.800	Rhinopithecus_roxellana
ENSCPBG00000019407	LARP4	91	69.441	ENSSBOG00000026650	LARP4	100	79.630	Saimiri_boliviensis_boliviensis
ENSCPBG00000019407	LARP4	91	50.000	ENSSFOG00015014096	larp4ab	100	51.160	Scleropages_formosus
ENSCPBG00000019407	LARP4	91	51.373	ENSSFOG00015003868	larp4aa	100	51.295	Scleropages_formosus
ENSCPBG00000019407	LARP4	90	44.373	ENSSMAG00000002838	larp4ab	99	44.643	Scophthalmus_maximus
ENSCPBG00000019407	LARP4	80	65.885	ENSSMAG00000019473	larp4aa	95	50.955	Scophthalmus_maximus
ENSCPBG00000019407	LARP4	90	46.623	ENSSDUG00000006655	larp4ab	99	47.320	Seriola_dumerili
ENSCPBG00000019407	LARP4	90	46.822	ENSSLDG00000001791	larp4ab	99	46.867	Seriola_lalandi_dorsalis
ENSCPBG00000019407	LARP4	90	66.985	ENSSARG00000012469	LARP4	100	67.667	Sorex_araneus
ENSCPBG00000019407	LARP4	86	79.943	ENSSPUG00000016552	LARP4	93	80.484	Sphenodon_punctatus
ENSCPBG00000019407	LARP4	90	45.019	ENSSPAG00000002172	larp4ab	99	44.631	Stegastes_partitus
ENSCPBG00000019407	LARP4	80	56.330	ENSSPAG00000007222	larp4aa	99	65.135	Stegastes_partitus
ENSCPBG00000019407	LARP4	91	72.147	ENSSSCG00000028516	LARP4	100	72.418	Sus_scrofa
ENSCPBG00000019407	LARP4	90	82.216	ENSTGUG00000003479	LARP4	100	81.943	Taeniopygia_guttata
ENSCPBG00000019407	LARP4	63	50.659	ENSTRUG00000007206	larp4ab	99	43.534	Takifugu_rubripes
ENSCPBG00000019407	LARP4	90	49.674	ENSTNIG00000015109	larp4aa	99	50.843	Tetraodon_nigroviridis
ENSCPBG00000019407	LARP4	90	45.442	ENSTNIG00000014571	larp4ab	99	44.619	Tetraodon_nigroviridis
ENSCPBG00000019407	LARP4	90	61.989	ENSTBEG00000005167	LARP4	100	62.262	Tupaia_belangeri
ENSCPBG00000019407	LARP4	90	70.270	ENSTTRG00000003764	LARP4	99	70.000	Tursiops_truncatus
ENSCPBG00000019407	LARP4	65	75.568	ENSUAMG00000013764	LARP4	99	78.523	Ursus_americanus
ENSCPBG00000019407	LARP4	91	72.343	ENSUMAG00000008473	LARP4	100	72.616	Ursus_maritimus
ENSCPBG00000019407	LARP4	90	69.973	ENSVPAG00000010136	LARP4	100	70.375	Vicugna_pacos
ENSCPBG00000019407	LARP4	91	72.245	ENSVVUG00000024717	LARP4	100	75.170	Vulpes_vulpes
ENSCPBG00000019407	LARP4	84	66.618	ENSXETG00000007283	larp4	100	66.618	Xenopus_tropicalis
ENSCPBG00000019407	LARP4	90	50.127	ENSXCOG00000006387	larp4aa	96	49.626	Xiphophorus_couchianus
ENSCPBG00000019407	LARP4	92	50.677	ENSXMAG00000010519	larp4aa	97	51.422	Xiphophorus_maculatus
ENSCPBG00000019407	LARP4	89	46.499	ENSXMAG00000002156	larp4ab	99	45.707	Xiphophorus_maculatus