EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000019836 (Gene tree)
Gene ID: 101933964
Gene Symbol: RBM17
Alias: MGC14439|SPF45
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 25997 bases
Position: chrKK082943.1:5834291-5860287
Accession: 16944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000028071	RRM_1	PF00076.22	0.00011	1	1
ENSCPBP00000028072	RRM_1	PF00076.22	0.00013	1	1
ENSCPBP00000028071	G-patch	PF01585.23	7.5e-13	1	1
ENSCPBP00000028072	G-patch	PF01585.23	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000033041	RBM17-201	5907	-	ENSCPBP00000028071	402 (aa)	XP_005291995	UPI000388EA01
ENSCPBT00000033042	RBM17-202	6649	-	ENSCPBP00000028072	443 (aa)	-	UPI00046C3888

Gene Model

Click here to download ENSCPBG00000019836's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019836	RBM17	100	94.776	ENSG00000134453	RBM17	100	94.776	Homo_sapiens
ENSCPBG00000019836	RBM17	99	83.005	ENSAPOG00000007101	rbm17	99	83.005	Acanthochromis_polyacanthus
ENSCPBG00000019836	RBM17	100	94.776	ENSAMEG00000002107	RBM17	100	94.776	Ailuropoda_melanoleuca
ENSCPBG00000019836	RBM17	100	79.657	ENSACIG00000006251	rbm17	100	79.657	Amphilophus_citrinellus
ENSCPBG00000019836	RBM17	100	83.047	ENSAOCG00000014892	rbm17	100	83.047	Amphiprion_ocellaris
ENSCPBG00000019836	RBM17	100	83.047	ENSAPEG00000022779	rbm17	100	83.047	Amphiprion_percula
ENSCPBG00000019836	RBM17	100	79.245	ENSATEG00000004406	rbm17	100	79.245	Anabas_testudineus
ENSCPBG00000019836	RBM17	100	97.015	ENSAPLG00000004190	RBM17	100	97.015	Anas_platyrhynchos
ENSCPBG00000019836	RBM17	90	92.992	ENSACAG00000005418	RBM17	100	92.742	Anolis_carolinensis
ENSCPBG00000019836	RBM17	100	80.397	ENSANAG00000019330	-	95	93.103	Aotus_nancymaae
ENSCPBG00000019836	RBM17	100	94.776	ENSANAG00000030127	RBM17	100	94.776	Aotus_nancymaae
ENSCPBG00000019836	RBM17	100	79.506	ENSACLG00000003928	rbm17	100	79.506	Astatotilapia_calliptera
ENSCPBG00000019836	RBM17	100	76.706	ENSAMXG00000005853	rbm17	100	79.294	Astyanax_mexicanus
ENSCPBG00000019836	RBM17	100	93.035	ENSBTAG00000011094	-	100	93.035	Bos_taurus
ENSCPBG00000019836	RBM17	100	94.279	ENSBTAG00000021951	RBM17	100	94.279	Bos_taurus
ENSCPBG00000019836	RBM17	73	33.333	WBGene00010233	F58B3.7	91	31.701	Caenorhabditis_elegans
ENSCPBG00000019836	RBM17	100	94.776	ENSCJAG00000020573	RBM17	100	94.776	Callithrix_jacchus
ENSCPBG00000019836	RBM17	100	94.776	ENSCAFG00000005206	RBM17	100	94.776	Canis_familiaris
ENSCPBG00000019836	RBM17	100	90.547	ENSCAFG00020005420	RBM17	100	90.547	Canis_lupus_dingo
ENSCPBG00000019836	RBM17	100	91.542	ENSCHIG00000019921	-	100	91.542	Capra_hircus
ENSCPBG00000019836	RBM17	100	94.279	ENSCHIG00000023204	-	100	94.279	Capra_hircus
ENSCPBG00000019836	RBM17	100	94.074	ENSTSYG00000001165	RBM17	99	96.610	Carlito_syrichta
ENSCPBG00000019836	RBM17	96	72.280	ENSCAPG00000006275	RBM17	100	76.503	Cavia_aperea
ENSCPBG00000019836	RBM17	100	89.976	ENSCPOG00000005679	RBM17	100	89.976	Cavia_porcellus
ENSCPBG00000019836	RBM17	100	94.776	ENSCCAG00000018655	RBM17	100	94.776	Cebus_capucinus
ENSCPBG00000019836	RBM17	100	94.776	ENSCATG00000041566	RBM17	100	94.776	Cercocebus_atys
ENSCPBG00000019836	RBM17	100	94.074	ENSCLAG00000012195	RBM17	100	94.089	Chinchilla_lanigera
ENSCPBG00000019836	RBM17	100	94.776	ENSCSAG00000013564	RBM17	100	94.776	Chlorocebus_sabaeus
ENSCPBG00000019836	RBM17	92	76.550	ENSCHOG00000005131	RBM17	100	76.550	Choloepus_hoffmanni
ENSCPBG00000019836	RBM17	99	46.731	ENSCSAVG00000008782	-	99	45.232	Ciona_savignyi
ENSCPBG00000019836	RBM17	98	83.461	ENSCANG00000023715	-	100	83.461	Colobus_angolensis_palliatus
ENSCPBG00000019836	RBM17	100	94.527	ENSCANG00000030987	RBM17	100	94.527	Colobus_angolensis_palliatus
ENSCPBG00000019836	RBM17	100	72.886	ENSCGRG00001009256	-	100	70.896	Cricetulus_griseus_chok1gshd
ENSCPBG00000019836	RBM17	100	94.568	ENSCGRG00001013842	Rbm17	100	94.568	Cricetulus_griseus_chok1gshd
ENSCPBG00000019836	RBM17	100	94.568	ENSCGRG00000006907	Rbm17	100	94.568	Cricetulus_griseus_crigri
ENSCPBG00000019836	RBM17	100	80.098	ENSCSEG00000018164	rbm17	100	79.853	Cynoglossus_semilaevis
ENSCPBG00000019836	RBM17	100	74.815	ENSCVAG00000002476	rbm17	100	76.156	Cyprinodon_variegatus
ENSCPBG00000019836	RBM17	100	77.176	ENSDARG00000031346	rbm17	100	77.176	Danio_rerio
ENSCPBG00000019836	RBM17	100	94.776	ENSDNOG00000035920	RBM17	100	94.776	Dasypus_novemcinctus
ENSCPBG00000019836	RBM17	99	35.088	FBgn0086683	Spf45	99	35.222	Drosophila_melanogaster
ENSCPBG00000019836	RBM17	100	71.891	ENSETEG00000006642	RBM17	100	71.891	Echinops_telfairi
ENSCPBG00000019836	RBM17	68	62.085	ENSEBUG00000010253	rbm17	90	62.085	Eptatretus_burgeri
ENSCPBG00000019836	RBM17	92	90.836	ENSEASG00005009236	-	100	90.836	Equus_asinus_asinus
ENSCPBG00000019836	RBM17	100	89.163	ENSEASG00005019205	-	100	89.163	Equus_asinus_asinus
ENSCPBG00000019836	RBM17	100	78.856	ENSECAG00000008939	RBM17	100	81.095	Equus_caballus
ENSCPBG00000019836	RBM17	100	84.328	ENSECAG00000001379	-	100	84.328	Equus_caballus
ENSCPBG00000019836	RBM17	86	75.652	ENSEEUG00000013077	RBM17	100	75.652	Erinaceus_europaeus
ENSCPBG00000019836	RBM17	99	76.977	ENSELUG00000006440	rbm17	99	76.744	Esox_lucius
ENSCPBG00000019836	RBM17	100	94.776	ENSFCAG00000031988	RBM17	100	94.776	Felis_catus
ENSCPBG00000019836	RBM17	100	96.269	ENSFALG00000001790	RBM17	100	96.269	Ficedula_albicollis
ENSCPBG00000019836	RBM17	100	94.074	ENSFDAG00000007470	RBM17	100	94.074	Fukomys_damarensis
ENSCPBG00000019836	RBM17	100	78.302	ENSFHEG00000001266	rbm17	100	77.778	Fundulus_heteroclitus
ENSCPBG00000019836	RBM17	99	76.010	ENSGMOG00000008438	rbm17	100	76.010	Gadus_morhua
ENSCPBG00000019836	RBM17	100	96.766	ENSGALG00000006332	RBM17	100	96.766	Gallus_gallus
ENSCPBG00000019836	RBM17	100	81.572	ENSGAFG00000019879	rbm17	100	81.572	Gambusia_affinis
ENSCPBG00000019836	RBM17	99	81.975	ENSGACG00000019174	rbm17	99	81.975	Gasterosteus_aculeatus
ENSCPBG00000019836	RBM17	100	100.000	ENSGAGG00000019906	RBM17	100	100.000	Gopherus_agassizii
ENSCPBG00000019836	RBM17	100	84.029	ENSHBUG00000016624	rbm17	100	84.029	Haplochromis_burtoni
ENSCPBG00000019836	RBM17	100	94.074	ENSHGLG00000011580	RBM17	100	94.074	Heterocephalus_glaber_female
ENSCPBG00000019836	RBM17	100	94.074	ENSHGLG00100010460	RBM17	100	94.074	Heterocephalus_glaber_male
ENSCPBG00000019836	RBM17	100	73.580	ENSHGLG00100010556	-	100	71.852	Heterocephalus_glaber_male
ENSCPBG00000019836	RBM17	99	78.520	ENSHCOG00000010865	rbm17	100	78.520	Hippocampus_comes
ENSCPBG00000019836	RBM17	100	78.220	ENSIPUG00000007699	Rbm17	100	78.220	Ictalurus_punctatus
ENSCPBG00000019836	RBM17	100	94.321	ENSSTOG00000013591	RBM17	100	94.321	Ictidomys_tridecemlineatus
ENSCPBG00000019836	RBM17	100	70.398	ENSJJAG00000000993	-	100	67.327	Jaculus_jaculus
ENSCPBG00000019836	RBM17	100	94.568	ENSJJAG00000022886	Rbm17	100	94.568	Jaculus_jaculus
ENSCPBG00000019836	RBM17	100	79.361	ENSKMAG00000021400	rbm17	100	80.098	Kryptolebias_marmoratus
ENSCPBG00000019836	RBM17	100	81.818	ENSLBEG00000000881	rbm17	100	78.824	Labrus_bergylta
ENSCPBG00000019836	RBM17	99	71.529	ENSLACG00000017297	RBM17	99	71.529	Latimeria_chalumnae
ENSCPBG00000019836	RBM17	100	88.395	ENSLOCG00000015659	rbm17	100	88.395	Lepisosteus_oculatus
ENSCPBG00000019836	RBM17	100	94.103	ENSLAFG00000011629	RBM17	100	94.103	Loxodonta_africana
ENSCPBG00000019836	RBM17	100	94.776	ENSMFAG00000035521	RBM17	100	94.776	Macaca_fascicularis
ENSCPBG00000019836	RBM17	100	94.776	ENSMMUG00000015152	RBM17	100	94.776	Macaca_mulatta
ENSCPBG00000019836	RBM17	100	94.776	ENSMNEG00000017264	RBM17	100	94.776	Macaca_nemestrina
ENSCPBG00000019836	RBM17	100	94.776	ENSMLEG00000029340	RBM17	100	94.776	Mandrillus_leucophaeus
ENSCPBG00000019836	RBM17	100	78.302	ENSMAMG00000000387	rbm17	100	78.302	Mastacembelus_armatus
ENSCPBG00000019836	RBM17	100	81.043	ENSMZEG00005015179	rbm17	100	81.043	Maylandia_zebra
ENSCPBG00000019836	RBM17	100	95.343	ENSMGAG00000003981	RBM17	100	95.343	Meleagris_gallopavo
ENSCPBG00000019836	RBM17	100	94.568	ENSMAUG00000019247	Rbm17	100	94.568	Mesocricetus_auratus
ENSCPBG00000019836	RBM17	100	86.308	ENSMICG00000041489	-	100	86.308	Microcebus_murinus
ENSCPBG00000019836	RBM17	100	93.333	ENSMICG00000003976	-	100	93.333	Microcebus_murinus
ENSCPBG00000019836	RBM17	93	77.067	ENSMOCG00000014517	-	99	77.067	Microtus_ochrogaster
ENSCPBG00000019836	RBM17	100	94.568	ENSMOCG00000011847	Rbm17	100	94.568	Microtus_ochrogaster
ENSCPBG00000019836	RBM17	100	75.971	ENSMMOG00000010264	rbm17	100	74.757	Mola_mola
ENSCPBG00000019836	RBM17	100	96.517	ENSMODG00000016648	RBM17	100	96.517	Monodelphis_domestica
ENSCPBG00000019836	RBM17	100	78.118	ENSMALG00000010597	rbm17	100	78.118	Monopterus_albus
ENSCPBG00000019836	RBM17	100	94.321	MGP_CAROLIEiJ_G0023173	Rbm17	100	94.321	Mus_caroli
ENSCPBG00000019836	RBM17	100	94.321	ENSMUSG00000037197	Rbm17	100	94.321	Mus_musculus
ENSCPBG00000019836	RBM17	100	94.568	MGP_PahariEiJ_G0019233	Rbm17	100	94.568	Mus_pahari
ENSCPBG00000019836	RBM17	100	94.321	MGP_SPRETEiJ_G0024091	Rbm17	100	94.321	Mus_spretus
ENSCPBG00000019836	RBM17	86	93.660	ENSMPUG00000016359	RBM17	97	93.660	Mustela_putorius_furo
ENSCPBG00000019836	RBM17	100	92.118	ENSMLUG00000002302	-	100	92.118	Myotis_lucifugus
ENSCPBG00000019836	RBM17	100	89.303	ENSMLUG00000025709	-	100	87.811	Myotis_lucifugus
ENSCPBG00000019836	RBM17	100	94.568	ENSNGAG00000000741	Rbm17	100	94.568	Nannospalax_galili
ENSCPBG00000019836	RBM17	100	65.920	ENSNGAG00000000663	-	100	65.423	Nannospalax_galili
ENSCPBG00000019836	RBM17	100	78.025	ENSNBRG00000018148	rbm17	100	78.025	Neolamprologus_brichardi
ENSCPBG00000019836	RBM17	100	94.776	ENSNLEG00000033350	RBM17	100	94.776	Nomascus_leucogenys
ENSCPBG00000019836	RBM17	100	90.299	ENSMEUG00000011347	RBM17	100	90.299	Notamacropus_eugenii
ENSCPBG00000019836	RBM17	100	81.592	ENSOPRG00000002993	RBM17	100	81.592	Ochotona_princeps
ENSCPBG00000019836	RBM17	97	72.519	ENSODEG00000007286	-	99	72.519	Octodon_degus
ENSCPBG00000019836	RBM17	100	93.596	ENSODEG00000004393	RBM17	100	93.596	Octodon_degus
ENSCPBG00000019836	RBM17	100	84.029	ENSONIG00000011838	rbm17	100	84.029	Oreochromis_niloticus
ENSCPBG00000019836	RBM17	100	95.285	ENSOANG00000015455	RBM17	100	95.285	Ornithorhynchus_anatinus
ENSCPBG00000019836	RBM17	100	80.000	ENSORLG00000028798	rbm17	100	80.637	Oryzias_latipes
ENSCPBG00000019836	RBM17	100	80.000	ENSORLG00020004593	rbm17	100	79.064	Oryzias_latipes_hni
ENSCPBG00000019836	RBM17	100	83.578	ENSORLG00015000033	rbm17	100	83.578	Oryzias_latipes_hsok
ENSCPBG00000019836	RBM17	100	79.765	ENSOMEG00000012060	rbm17	100	87.500	Oryzias_melastigma
ENSCPBG00000019836	RBM17	100	93.580	ENSOGAG00000015687	RBM17	100	93.580	Otolemur_garnettii
ENSCPBG00000019836	RBM17	100	94.279	ENSOARG00000012975	RBM17	100	94.279	Ovis_aries
ENSCPBG00000019836	RBM17	100	94.776	ENSPPAG00000032347	RBM17	100	94.776	Pan_paniscus
ENSCPBG00000019836	RBM17	100	94.776	ENSPPRG00000010706	RBM17	100	94.776	Panthera_pardus
ENSCPBG00000019836	RBM17	100	94.776	ENSPTIG00000007596	RBM17	100	94.776	Panthera_tigris_altaica
ENSCPBG00000019836	RBM17	100	94.776	ENSPTRG00000002265	RBM17	100	94.776	Pan_troglodytes
ENSCPBG00000019836	RBM17	100	94.776	ENSPANG00000023425	RBM17	100	94.776	Papio_anubis
ENSCPBG00000019836	RBM17	100	76.526	ENSPKIG00000005048	-	100	76.526	Paramormyrops_kingsleyae
ENSCPBG00000019836	RBM17	100	79.059	ENSPKIG00000025526	rbm17	100	78.638	Paramormyrops_kingsleyae
ENSCPBG00000019836	RBM17	100	97.531	ENSPSIG00000012332	RBM17	100	97.531	Pelodiscus_sinensis
ENSCPBG00000019836	RBM17	100	77.887	ENSPMGG00000007980	rbm17	100	77.887	Periophthalmus_magnuspinnatus
ENSCPBG00000019836	RBM17	100	94.568	ENSPEMG00000014320	Rbm17	100	94.568	Peromyscus_maniculatus_bairdii
ENSCPBG00000019836	RBM17	100	96.040	ENSPCIG00000019260	-	100	96.040	Phascolarctos_cinereus
ENSCPBG00000019836	RBM17	100	79.009	ENSPFOG00000013271	rbm17	100	79.009	Poecilia_formosa
ENSCPBG00000019836	RBM17	100	79.245	ENSPLAG00000004455	rbm17	100	79.245	Poecilia_latipinna
ENSCPBG00000019836	RBM17	100	82.310	ENSPMEG00000014864	rbm17	100	82.310	Poecilia_mexicana
ENSCPBG00000019836	RBM17	100	79.009	ENSPREG00000015589	rbm17	100	79.009	Poecilia_reticulata
ENSCPBG00000019836	RBM17	100	94.776	ENSPPYG00000002067	RBM17	100	94.776	Pongo_abelii
ENSCPBG00000019836	RBM17	99	69.500	ENSPPYG00000019881	-	100	69.250	Pongo_abelii
ENSCPBG00000019836	RBM17	81	67.593	ENSPPYG00000019042	-	100	67.284	Pongo_abelii
ENSCPBG00000019836	RBM17	100	87.313	ENSPCAG00000016879	RBM17	100	87.313	Procavia_capensis
ENSCPBG00000019836	RBM17	100	94.279	ENSPCOG00000027881	RBM17	100	94.279	Propithecus_coquereli
ENSCPBG00000019836	RBM17	100	83.582	ENSPVAG00000015499	RBM17	100	82.090	Pteropus_vampyrus
ENSCPBG00000019836	RBM17	100	76.866	ENSPNYG00000015274	rbm17	100	77.114	Pundamilia_nyererei
ENSCPBG00000019836	RBM17	100	79.059	ENSPNAG00000030046	rbm17	100	79.059	Pygocentrus_nattereri
ENSCPBG00000019836	RBM17	100	94.568	ENSRNOG00000018767	Rbm17	100	94.568	Rattus_norvegicus
ENSCPBG00000019836	RBM17	100	94.776	ENSRBIG00000043727	RBM17	100	94.776	Rhinopithecus_bieti
ENSCPBG00000019836	RBM17	100	94.776	ENSRROG00000044142	RBM17	100	94.776	Rhinopithecus_roxellana
ENSCPBG00000019836	RBM17	100	84.328	ENSSBOG00000023653	-	100	84.328	Saimiri_boliviensis_boliviensis
ENSCPBG00000019836	RBM17	100	94.527	ENSSBOG00000031661	-	100	94.527	Saimiri_boliviensis_boliviensis
ENSCPBG00000019836	RBM17	100	96.517	ENSSHAG00000012480	-	100	96.517	Sarcophilus_harrisii
ENSCPBG00000019836	RBM17	100	82.310	ENSSFOG00015009892	rbm17	100	82.310	Scleropages_formosus
ENSCPBG00000019836	RBM17	100	78.465	ENSSMAG00000012368	rbm17	100	77.612	Scophthalmus_maximus
ENSCPBG00000019836	RBM17	100	82.039	ENSSDUG00000015015	rbm17	100	82.324	Seriola_dumerili
ENSCPBG00000019836	RBM17	100	82.039	ENSSLDG00000014486	rbm17	100	82.324	Seriola_lalandi_dorsalis
ENSCPBG00000019836	RBM17	59	77.215	ENSSARG00000001792	-	100	77.215	Sorex_araneus
ENSCPBG00000019836	RBM17	99	97.500	ENSSPUG00000001036	RBM17	99	97.500	Sphenodon_punctatus
ENSCPBG00000019836	RBM17	100	83.292	ENSSPAG00000002338	rbm17	100	83.292	Stegastes_partitus
ENSCPBG00000019836	RBM17	100	94.030	ENSSSCG00000011134	RBM17	100	94.030	Sus_scrofa
ENSCPBG00000019836	RBM17	100	95.556	ENSTGUG00000002013	RBM17	100	95.556	Taeniopygia_guttata
ENSCPBG00000019836	RBM17	100	82.555	ENSTRUG00000010698	rbm17	100	82.555	Takifugu_rubripes
ENSCPBG00000019836	RBM17	100	81.663	ENSTNIG00000006892	rbm17	100	81.663	Tetraodon_nigroviridis
ENSCPBG00000019836	RBM17	100	74.876	ENSTBEG00000014686	RBM17	100	74.876	Tupaia_belangeri
ENSCPBG00000019836	RBM17	90	93.629	ENSTTRG00000001344	RBM17	100	93.629	Tursiops_truncatus
ENSCPBG00000019836	RBM17	100	90.547	ENSUAMG00000009499	RBM17	100	90.547	Ursus_americanus
ENSCPBG00000019836	RBM17	100	94.527	ENSUMAG00000012237	RBM17	100	94.527	Ursus_maritimus
ENSCPBG00000019836	RBM17	100	79.851	ENSVPAG00000005497	RBM17	100	79.851	Vicugna_pacos
ENSCPBG00000019836	RBM17	100	90.547	ENSVVUG00000006780	RBM17	97	93.660	Vulpes_vulpes
ENSCPBG00000019836	RBM17	99	88.279	ENSXETG00000018123	rbm17	100	88.279	Xenopus_tropicalis
ENSCPBG00000019836	RBM17	100	81.081	ENSXMAG00000008674	rbm17	100	81.818	Xiphophorus_maculatus