EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000019934 (Gene tree)
Gene ID: 101941305
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 33439 bases
Position: chrKK088210.1:1721583-1755021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000028182	GUCT	PF08152.12	1.9e-32	1	1
ENSCPBP00000028184	GUCT	PF08152.12	2.9e-21	1	1
ENSCPBP00000028184	ResIII	PF04851.15	1.7e-08	1	1
ENSCPBP00000028182	ResIII	PF04851.15	1.7e-08	1	1
ENSCPBP00000028184	DEAD	PF00270.29	6.6e-47	1	1
ENSCPBP00000028182	DEAD	PF00270.29	7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000033197	-	2486	-	ENSCPBP00000028184	684 (aa)	-	-
ENSCPBT00000033195	-	2531	-	ENSCPBP00000028182	699 (aa)	XP_005297366	UPI000388EB6F

Gene Model

Click here to download ENSCPBG00000019934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000019934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000019934	-	53	34.492	ENSCPBG00000010529	DDX18	53	34.492
ENSCPBG00000019934	-	50	35.043	ENSCPBG00000026547	DDX4	59	35.043
ENSCPBG00000019934	-	50	30.194	ENSCPBG00000011165	DDX25	76	30.194
ENSCPBG00000019934	-	51	32.303	ENSCPBG00000020967	-	74	32.303
ENSCPBG00000019934	-	53	31.034	ENSCPBG00000025960	DDX55	68	31.034
ENSCPBG00000019934	-	93	79.755	ENSCPBG00000019937	-	86	77.525
ENSCPBG00000019934	-	53	33.871	ENSCPBG00000021681	DDX10	54	33.871
ENSCPBG00000019934	-	50	33.518	ENSCPBG00000012500	DDX49	71	33.518
ENSCPBG00000019934	-	51	32.493	ENSCPBG00000000975	EIF4A2	90	32.468
ENSCPBG00000019934	-	51	33.938	ENSCPBG00000019916	-	55	33.938
ENSCPBG00000019934	-	54	32.796	ENSCPBG00000023015	-	96	31.220
ENSCPBG00000019934	-	50	31.304	ENSCPBG00000028288	DDX59	54	31.304
ENSCPBG00000019934	-	50	34.188	ENSCPBG00000009227	DDX5	57	34.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000019934	-	89	72.403	ENSG00000165732	DDX21	94	70.606	Homo_sapiens
ENSCPBG00000019934	-	56	80.418	ENSAPOG00000012269	ddx21	92	66.600	Acanthochromis_polyacanthus
ENSCPBG00000019934	-	82	77.758	ENSAMEG00000017978	DDX21	81	67.971	Ailuropoda_melanoleuca
ENSCPBG00000019934	-	78	76.095	ENSACIG00000006429	ddx21	80	73.109	Amphilophus_citrinellus
ENSCPBG00000019934	-	79	75.632	ENSAOCG00000023174	ddx21	91	65.357	Amphiprion_ocellaris
ENSCPBG00000019934	-	79	75.632	ENSAPEG00000007108	ddx21	91	65.357	Amphiprion_percula
ENSCPBG00000019934	-	87	71.057	ENSATEG00000022194	ddx21	86	69.325	Anabas_testudineus
ENSCPBG00000019934	-	88	80.671	ENSAPLG00000013022	-	96	78.507	Anas_platyrhynchos
ENSCPBG00000019934	-	92	75.303	ENSACAG00000009829	DDX21	84	75.262	Anolis_carolinensis
ENSCPBG00000019934	-	88	74.716	ENSANAG00000038109	DDX21	94	81.115	Aotus_nancymaae
ENSCPBG00000019934	-	79	75.949	ENSACLG00000008248	ddx21	73	74.227	Astatotilapia_calliptera
ENSCPBG00000019934	-	89	67.132	ENSAMXG00000009140	ddx21	92	66.066	Astyanax_mexicanus
ENSCPBG00000019934	-	89	70.698	ENSBTAG00000014558	DDX21	84	70.091	Bos_taurus
ENSCPBG00000019934	-	98	67.983	ENSCJAG00000012876	DDX21	84	70.890	Callithrix_jacchus
ENSCPBG00000019934	-	89	72.025	ENSCAFG00000013791	DDX21	84	71.128	Canis_familiaris
ENSCPBG00000019934	-	50	82.891	ENSCAFG00020025973	-	93	82.891	Canis_lupus_dingo
ENSCPBG00000019934	-	82	55.330	ENSCHIG00000006053	-	82	51.622	Capra_hircus
ENSCPBG00000019934	-	91	70.331	ENSCHIG00000000248	-	87	70.331	Capra_hircus
ENSCPBG00000019934	-	82	58.262	ENSCHIG00000014104	-	84	52.847	Capra_hircus
ENSCPBG00000019934	-	88	74.183	ENSTSYG00000011231	DDX21	79	73.175	Carlito_syrichta
ENSCPBG00000019934	-	98	53.746	ENSCAPG00000005945	DDX21	81	56.260	Cavia_aperea
ENSCPBG00000019934	-	98	67.137	ENSCPOG00000015479	DDX21	84	70.544	Cavia_porcellus
ENSCPBG00000019934	-	88	74.351	ENSCCAG00000026288	DDX21	95	78.592	Cebus_capucinus
ENSCPBG00000019934	-	89	56.459	ENSCATG00000045019	-	83	56.056	Cercocebus_atys
ENSCPBG00000019934	-	98	67.465	ENSCATG00000043540	DDX21	86	69.572	Cercocebus_atys
ENSCPBG00000019934	-	99	65.075	ENSCLAG00000012235	DDX21	84	71.494	Chinchilla_lanigera
ENSCPBG00000019934	-	90	64.551	ENSCHOG00000000234	DDX21	83	64.110	Choloepus_hoffmanni
ENSCPBG00000019934	-	97	53.666	ENSCANG00000036110	-	83	53.846	Colobus_angolensis_palliatus
ENSCPBG00000019934	-	98	67.983	ENSCANG00000039926	DDX21	86	70.310	Colobus_angolensis_palliatus
ENSCPBG00000019934	-	90	73.101	ENSCGRG00001016264	-	84	71.385	Cricetulus_griseus_chok1gshd
ENSCPBG00000019934	-	91	64.455	ENSCGRG00001017824	-	86	63.720	Cricetulus_griseus_chok1gshd
ENSCPBG00000019934	-	91	64.613	ENSCGRG00000008450	-	86	63.872	Cricetulus_griseus_crigri
ENSCPBG00000019934	-	90	73.101	ENSCGRG00000015134	-	84	71.385	Cricetulus_griseus_crigri
ENSCPBG00000019934	-	78	74.908	ENSCSEG00000013939	ddx21	82	69.255	Cynoglossus_semilaevis
ENSCPBG00000019934	-	78	76.796	ENSCVAG00000018333	ddx21	90	65.598	Cyprinodon_variegatus
ENSCPBG00000019934	-	82	74.087	ENSDARG00000063626	ddx21	80	68.293	Danio_rerio
ENSCPBG00000019934	-	89	71.385	ENSDNOG00000001680	DDX21	87	70.519	Dasypus_novemcinctus
ENSCPBG00000019934	-	87	67.816	ENSDORG00000002202	Ddx21	79	66.825	Dipodomys_ordii
ENSCPBG00000019934	-	86	73.203	ENSETEG00000014073	DDX21	80	71.540	Echinops_telfairi
ENSCPBG00000019934	-	88	74.715	ENSEASG00005015598	DDX21	77	74.240	Equus_asinus_asinus
ENSCPBG00000019934	-	89	71.517	ENSECAG00000010810	DDX21	84	70.588	Equus_caballus
ENSCPBG00000019934	-	82	70.893	ENSEEUG00000005959	DDX21	85	68.439	Erinaceus_europaeus
ENSCPBG00000019934	-	78	75.000	ENSELUG00000018856	ddx21	87	66.368	Esox_lucius
ENSCPBG00000019934	-	89	72.093	ENSFCAG00000002109	DDX21	83	71.493	Felis_catus
ENSCPBG00000019934	-	77	86.876	ENSFALG00000013022	-	98	78.496	Ficedula_albicollis
ENSCPBG00000019934	-	92	67.951	ENSFALG00000013043	-	92	68.740	Ficedula_albicollis
ENSCPBG00000019934	-	99	67.500	ENSFDAG00000007401	DDX21	84	71.299	Fukomys_damarensis
ENSCPBG00000019934	-	85	71.092	ENSFHEG00000019089	ddx21	86	66.104	Fundulus_heteroclitus
ENSCPBG00000019934	-	77	69.573	ENSGMOG00000012354	ddx21	95	66.437	Gadus_morhua
ENSCPBG00000019934	-	93	67.530	ENSGALG00000042254	-	94	66.512	Gallus_gallus
ENSCPBG00000019934	-	94	78.221	ENSGALG00000004144	-	97	79.148	Gallus_gallus
ENSCPBG00000019934	-	80	74.688	ENSGAFG00000003427	ddx21	92	66.087	Gambusia_affinis
ENSCPBG00000019934	-	77	75.370	ENSGACG00000016060	ddx21	93	69.206	Gasterosteus_aculeatus
ENSCPBG00000019934	-	99	74.184	ENSGAGG00000022169	-	99	74.468	Gopherus_agassizii
ENSCPBG00000019934	-	94	95.878	ENSGAGG00000022163	-	87	95.878	Gopherus_agassizii
ENSCPBG00000019934	-	89	72.558	ENSGGOG00000005065	DDX21	86	70.753	Gorilla_gorilla
ENSCPBG00000019934	-	79	75.949	ENSHBUG00000017638	ddx21	73	74.227	Haplochromis_burtoni
ENSCPBG00000019934	-	93	71.626	ENSHGLG00000013902	DDX21	84	71.493	Heterocephalus_glaber_female
ENSCPBG00000019934	-	93	71.626	ENSHGLG00100015956	DDX21	85	72.298	Heterocephalus_glaber_male
ENSCPBG00000019934	-	78	73.761	ENSHCOG00000014503	ddx21	87	66.052	Hippocampus_comes
ENSCPBG00000019934	-	80	75.714	ENSIPUG00000006972	ddx21	92	65.156	Ictalurus_punctatus
ENSCPBG00000019934	-	90	72.419	ENSSTOG00000011572	DDX21	83	71.429	Ictidomys_tridecemlineatus
ENSCPBG00000019934	-	86	72.757	ENSJJAG00000014035	Ddx21	84	69.436	Jaculus_jaculus
ENSCPBG00000019934	-	79	74.549	ENSKMAG00000020766	ddx21	84	68.652	Kryptolebias_marmoratus
ENSCPBG00000019934	-	81	75.133	ENSLBEG00000001244	ddx21	91	65.412	Labrus_bergylta
ENSCPBG00000019934	-	79	78.300	ENSLACG00000000658	DDX21	99	77.682	Latimeria_chalumnae
ENSCPBG00000019934	-	77	75.556	ENSLOCG00000009123	ddx21	85	67.265	Lepisosteus_oculatus
ENSCPBG00000019934	-	89	70.416	ENSLAFG00000007962	DDX21	84	69.520	Loxodonta_africana
ENSCPBG00000019934	-	89	71.473	ENSMFAG00000044838	DDX21	94	79.667	Macaca_fascicularis
ENSCPBG00000019934	-	89	56.916	ENSMFAG00000033536	-	83	56.502	Macaca_fascicularis
ENSCPBG00000019934	-	89	59.070	ENSMMUG00000032331	-	84	58.610	Macaca_mulatta
ENSCPBG00000019934	-	93	69.867	ENSMMUG00000001005	DDX21	86	69.867	Macaca_mulatta
ENSCPBG00000019934	-	89	71.473	ENSMNEG00000032825	DDX21	86	69.719	Macaca_nemestrina
ENSCPBG00000019934	-	89	68.062	ENSMLEG00000028940	DDX21	90	80.696	Mandrillus_leucophaeus
ENSCPBG00000019934	-	89	56.938	ENSMLEG00000028215	-	83	56.522	Mandrillus_leucophaeus
ENSCPBG00000019934	-	90	64.053	ENSMAMG00000019683	ddx21	97	62.857	Mastacembelus_armatus
ENSCPBG00000019934	-	79	75.949	ENSMZEG00005011618	ddx21	77	74.227	Maylandia_zebra
ENSCPBG00000019934	-	88	82.143	ENSMGAG00000004298	DDX21	99	78.838	Meleagris_gallopavo
ENSCPBG00000019934	-	87	73.539	ENSMAUG00000011153	Ddx21	85	71.125	Mesocricetus_auratus
ENSCPBG00000019934	-	90	71.494	ENSMICG00000015112	-	84	70.890	Microcebus_murinus
ENSCPBG00000019934	-	90	65.777	ENSMICG00000033371	-	99	66.667	Microcebus_murinus
ENSCPBG00000019934	-	93	71.842	ENSMOCG00000020855	Ddx21	83	71.842	Microtus_ochrogaster
ENSCPBG00000019934	-	70	76.151	ENSMMOG00000015938	ddx21	90	76.471	Mola_mola
ENSCPBG00000019934	-	85	72.483	ENSMODG00000010727	DDX21	85	71.019	Monodelphis_domestica
ENSCPBG00000019934	-	87	65.416	ENSMALG00000010489	ddx21	93	64.557	Monopterus_albus
ENSCPBG00000019934	-	89	72.274	MGP_CAROLIEiJ_G0015388	Ddx21	85	71.321	Mus_caroli
ENSCPBG00000019934	-	89	72.274	ENSMUSG00000020075	Ddx21	78	70.833	Mus_musculus
ENSCPBG00000019934	-	89	72.430	MGP_SPRETEiJ_G0016199	Ddx21	77	71.624	Mus_spretus
ENSCPBG00000019934	-	88	74.026	ENSMPUG00000004603	DDX21	79	73.028	Mustela_putorius_furo
ENSCPBG00000019934	-	89	71.296	ENSMLUG00000023298	DDX21	83	69.242	Myotis_lucifugus
ENSCPBG00000019934	-	89	69.725	ENSNGAG00000022273	Ddx21	80	72.543	Nannospalax_galili
ENSCPBG00000019934	-	79	75.949	ENSNBRG00000006198	ddx21	84	69.937	Neolamprologus_brichardi
ENSCPBG00000019934	-	89	72.248	ENSNLEG00000011591	DDX21	92	71.342	Nomascus_leucogenys
ENSCPBG00000019934	-	74	75.290	ENSOPRG00000001640	DDX21	81	66.983	Ochotona_princeps
ENSCPBG00000019934	-	89	57.643	ENSODEG00000012879	-	81	60.504	Octodon_degus
ENSCPBG00000019934	-	79	76.130	ENSONIG00000005499	ddx21	79	70.458	Oreochromis_niloticus
ENSCPBG00000019934	-	91	68.311	ENSOANG00000004777	DDX21	87	67.883	Ornithorhynchus_anatinus
ENSCPBG00000019934	-	82	74.500	ENSOCUG00000002888	DDX21	71	74.500	Oryctolagus_cuniculus
ENSCPBG00000019934	-	79	75.862	ENSORLG00000010122	ddx21	91	73.019	Oryzias_latipes
ENSCPBG00000019934	-	79	75.862	ENSORLG00020004409	ddx21	90	73.019	Oryzias_latipes_hni
ENSCPBG00000019934	-	78	76.147	ENSORLG00015000051	ddx21	91	73.019	Oryzias_latipes_hsok
ENSCPBG00000019934	-	79	75.451	ENSOMEG00000004523	ddx21	83	68.453	Oryzias_melastigma
ENSCPBG00000019934	-	81	74.527	ENSOGAG00000001846	-	69	74.527	Otolemur_garnettii
ENSCPBG00000019934	-	84	68.697	ENSOGAG00000031242	-	99	66.032	Otolemur_garnettii
ENSCPBG00000019934	-	89	71.097	ENSOARG00000005307	DDX21	84	70.482	Ovis_aries
ENSCPBG00000019934	-	89	72.558	ENSPPAG00000036670	DDX21	86	70.753	Pan_paniscus
ENSCPBG00000019934	-	89	72.093	ENSPPRG00000012523	DDX21	83	71.493	Panthera_pardus
ENSCPBG00000019934	-	89	72.403	ENSPTIG00000007268	DDX21	83	71.493	Panthera_tigris_altaica
ENSCPBG00000019934	-	89	72.558	ENSPTRG00000002563	DDX21	86	70.753	Pan_troglodytes
ENSCPBG00000019934	-	96	54.492	ENSPANG00000031334	-	83	56.211	Papio_anubis
ENSCPBG00000019934	-	89	71.473	ENSPANG00000022140	DDX21	86	69.719	Papio_anubis
ENSCPBG00000019934	-	89	68.917	ENSPKIG00000014660	ddx21	88	67.835	Paramormyrops_kingsleyae
ENSCPBG00000019934	-	95	78.593	ENSPSIG00000004724	DDX21	98	78.701	Pelodiscus_sinensis
ENSCPBG00000019934	-	99	61.646	ENSPEMG00000018513	Ddx21	80	72.543	Peromyscus_maniculatus_bairdii
ENSCPBG00000019934	-	89	75.399	ENSPCIG00000015505	DDX21	98	66.011	Phascolarctos_cinereus
ENSCPBG00000019934	-	81	74.956	ENSPFOG00000016196	ddx21	86	66.032	Poecilia_formosa
ENSCPBG00000019934	-	76	75.843	ENSPLAG00000017849	ddx21	95	66.261	Poecilia_latipinna
ENSCPBG00000019934	-	81	74.956	ENSPMEG00000014571	ddx21	86	66.032	Poecilia_mexicana
ENSCPBG00000019934	-	91	71.536	ENSPPYG00000002389	DDX21	86	70.753	Pongo_abelii
ENSCPBG00000019934	-	86	70.940	ENSPCAG00000016697	DDX21	85	70.736	Procavia_capensis
ENSCPBG00000019934	-	90	68.598	ENSPCOG00000019284	DDX21	83	68.024	Propithecus_coquereli
ENSCPBG00000019934	-	89	72.403	ENSPVAG00000009521	DDX21	84	71.493	Pteropus_vampyrus
ENSCPBG00000019934	-	75	76.571	ENSPNYG00000015566	ddx21	92	71.821	Pundamilia_nyererei
ENSCPBG00000019934	-	78	73.105	ENSPNAG00000004814	ddx21	80	72.125	Pygocentrus_nattereri
ENSCPBG00000019934	-	89	70.724	ENSRNOG00000048990	AABR07037356.1	84	69.820	Rattus_norvegicus
ENSCPBG00000019934	-	89	71.341	ENSRNOG00000043099	Ddx21	84	70.420	Rattus_norvegicus
ENSCPBG00000019934	-	89	71.938	ENSRBIG00000043721	-	94	78.675	Rhinopithecus_bieti
ENSCPBG00000019934	-	99	63.559	ENSRBIG00000035862	-	86	66.168	Rhinopithecus_bieti
ENSCPBG00000019934	-	98	67.792	ENSRROG00000033387	DDX21	86	70.015	Rhinopithecus_roxellana
ENSCPBG00000019934	-	98	52.224	ENSSBOG00000025801	-	87	53.544	Saimiri_boliviensis_boliviensis
ENSCPBG00000019934	-	85	69.936	ENSSFOG00015014610	ddx21	99	70.189	Scleropages_formosus
ENSCPBG00000019934	-	77	75.046	ENSSMAG00000003932	ddx21	78	71.912	Scophthalmus_maximus
ENSCPBG00000019934	-	78	74.545	ENSSDUG00000021420	ddx21	85	68.519	Seriola_dumerili
ENSCPBG00000019934	-	80	72.890	ENSSLDG00000025665	ddx21	92	71.138	Seriola_lalandi_dorsalis
ENSCPBG00000019934	-	54	57.219	ENSSARG00000014024	-	55	56.410	Sorex_araneus
ENSCPBG00000019934	-	79	83.636	ENSSPUG00000004088	DDX21	82	81.356	Sphenodon_punctatus
ENSCPBG00000019934	-	78	76.471	ENSSPAG00000013142	ddx21	87	67.064	Stegastes_partitus
ENSCPBG00000019934	-	89	71.163	ENSSSCG00000010247	DDX21	84	70.242	Sus_scrofa
ENSCPBG00000019934	-	77	87.061	ENSTGUG00000003810	-	98	78.326	Taeniopygia_guttata
ENSCPBG00000019934	-	77	77.196	ENSTRUG00000017570	ddx21	97	64.857	Takifugu_rubripes
ENSCPBG00000019934	-	77	76.262	ENSTNIG00000013798	ddx21	95	73.368	Tetraodon_nigroviridis
ENSCPBG00000019934	-	89	65.831	ENSTBEG00000002310	DDX21	83	65.191	Tupaia_belangeri
ENSCPBG00000019934	-	96	68.625	ENSTTRG00000016398	DDX21	84	70.890	Tursiops_truncatus
ENSCPBG00000019934	-	89	74.598	ENSUMAG00000007735	DDX21	80	73.594	Ursus_maritimus
ENSCPBG00000019934	-	80	76.234	ENSVPAG00000000627	DDX21	82	75.000	Vicugna_pacos
ENSCPBG00000019934	-	86	75.581	ENSVVUG00000020486	DDX21	78	74.080	Vulpes_vulpes
ENSCPBG00000019934	-	76	75.281	ENSXCOG00000009654	ddx21	91	66.667	Xiphophorus_couchianus
ENSCPBG00000019934	-	81	74.778	ENSXMAG00000008199	ddx21	92	66.256	Xiphophorus_maculatus