EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000020255 (Gene tree)
Gene ID: 101935006
Gene Symbol: SNAI2
Alias: SLUG|SLUGH|SLUGH1|SNAIL2
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 8173 bases
Position: chrKK082928.1:2634460-2642632
Accession: 11094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000028709	zf-C2H2	PF00096.26	2e-27	1	5
ENSCPBP00000028709	zf-C2H2	PF00096.26	2e-27	2	5
ENSCPBP00000028709	zf-C2H2	PF00096.26	2e-27	3	5
ENSCPBP00000028709	zf-C2H2	PF00096.26	2e-27	4	5
ENSCPBP00000028709	zf-C2H2	PF00096.26	2e-27	5	5
ENSCPBP00000028710	zf-C2H2	PF00096.26	2e-27	1	5
ENSCPBP00000028710	zf-C2H2	PF00096.26	2e-27	2	5
ENSCPBP00000028710	zf-C2H2	PF00096.26	2e-27	3	5
ENSCPBP00000028710	zf-C2H2	PF00096.26	2e-27	4	5
ENSCPBP00000028710	zf-C2H2	PF00096.26	2e-27	5	5
ENSCPBP00000028709	zf-met	PF12874.7	3.8e-08	1	1
ENSCPBP00000028710	zf-met	PF12874.7	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000033790	SNAI2-202	1901	-	ENSCPBP00000028710	268 (aa)	XP_005279992	UPI000388B8B4
ENSCPBT00000033789	SNAI2-201	1790	-	ENSCPBP00000028709	268 (aa)	XP_005279992	UPI000388B8B4

Gene Model

Click here to download ENSCPBG00000020255's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000020255	SNAI2	99	52.703	ENSCPBG00000023474	SNAI3	99	52.703
ENSCPBG00000020255	SNAI2	99	40.345	ENSCPBG00000018899	SCRT1	95	41.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020255	SNAI2	99	49.320	ENSG00000185669	SNAI3	99	46.823	Homo_sapiens
ENSCPBG00000020255	SNAI2	100	93.657	ENSG00000019549	SNAI2	100	93.657	Homo_sapiens
ENSCPBG00000020255	SNAI2	100	95.149	ENSAMEG00000009606	SNAI2	100	95.149	Ailuropoda_melanoleuca
ENSCPBG00000020255	SNAI2	99	50.000	ENSANAG00000032748	SNAI3	99	44.951	Aotus_nancymaae
ENSCPBG00000020255	SNAI2	100	92.910	ENSANAG00000021163	SNAI2	100	92.910	Aotus_nancymaae
ENSCPBG00000020255	SNAI2	100	89.925	ENSBTAG00000013227	SNAI2	100	89.925	Bos_taurus
ENSCPBG00000020255	SNAI2	99	45.608	ENSBTAG00000017528	SNAI3	99	47.841	Bos_taurus
ENSCPBG00000020255	SNAI2	100	93.657	ENSCJAG00000013499	SNAI2	100	93.657	Callithrix_jacchus
ENSCPBG00000020255	SNAI2	99	47.766	ENSCAFG00000029458	SNAI3	99	47.260	Canis_familiaris
ENSCPBG00000020255	SNAI2	100	94.403	ENSCAFG00000006638	SNAI2	100	94.403	Canis_familiaris
ENSCPBG00000020255	SNAI2	100	94.403	ENSCAFG00020015384	SNAI2	100	94.403	Canis_lupus_dingo
ENSCPBG00000020255	SNAI2	99	48.110	ENSCAFG00020004719	SNAI3	99	47.603	Canis_lupus_dingo
ENSCPBG00000020255	SNAI2	99	45.752	ENSCHIG00000018087	SNAI3	99	46.128	Capra_hircus
ENSCPBG00000020255	SNAI2	100	89.552	ENSCHIG00000024410	SNAI2	100	89.552	Capra_hircus
ENSCPBG00000020255	SNAI2	90	93.776	ENSTSYG00000030892	SNAI2	90	93.776	Carlito_syrichta
ENSCPBG00000020255	SNAI2	53	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSCPBG00000020255	SNAI2	83	93.274	ENSCAPG00000013078	SNAI2	100	93.274	Cavia_aperea
ENSCPBG00000020255	SNAI2	100	93.657	ENSCCAG00000024100	SNAI2	100	93.657	Cebus_capucinus
ENSCPBG00000020255	SNAI2	99	49.320	ENSCATG00000031714	SNAI3	99	47.231	Cercocebus_atys
ENSCPBG00000020255	SNAI2	100	93.657	ENSCATG00000028656	SNAI2	100	93.657	Cercocebus_atys
ENSCPBG00000020255	SNAI2	100	93.657	ENSCLAG00000011797	SNAI2	100	93.657	Chinchilla_lanigera
ENSCPBG00000020255	SNAI2	100	93.657	ENSCSAG00000014787	SNAI2	100	93.657	Chlorocebus_sabaeus
ENSCPBG00000020255	SNAI2	50	65.672	ENSCSAVG00000009819	-	81	57.962	Ciona_savignyi
ENSCPBG00000020255	SNAI2	100	93.657	ENSCANG00000029656	SNAI2	100	93.657	Colobus_angolensis_palliatus
ENSCPBG00000020255	SNAI2	99	46.713	ENSCGRG00001011389	Snai3	99	46.713	Cricetulus_griseus_chok1gshd
ENSCPBG00000020255	SNAI2	100	92.537	ENSCGRG00001013674	Snai2	100	92.537	Cricetulus_griseus_chok1gshd
ENSCPBG00000020255	SNAI2	100	92.537	ENSCGRG00000012119	Snai2	100	92.537	Cricetulus_griseus_crigri
ENSCPBG00000020255	SNAI2	99	46.713	ENSCGRG00000014932	Snai3	99	46.713	Cricetulus_griseus_crigri
ENSCPBG00000020255	SNAI2	78	35.088	ENSDNOG00000035204	-	100	35.268	Dasypus_novemcinctus
ENSCPBG00000020255	SNAI2	100	91.418	ENSDORG00000029620	Snai2	100	91.418	Dipodomys_ordii
ENSCPBG00000020255	SNAI2	99	48.454	ENSECAG00000012131	SNAI3	99	47.213	Equus_caballus
ENSCPBG00000020255	SNAI2	100	83.209	ENSELUG00000021795	SNAI2	79	82.090	Esox_lucius
ENSCPBG00000020255	SNAI2	99	55.517	ENSELUG00000018742	-	99	54.422	Esox_lucius
ENSCPBG00000020255	SNAI2	99	45.620	ENSFCAG00000043885	SNAI3	99	45.848	Felis_catus
ENSCPBG00000020255	SNAI2	89	63.025	ENSFALG00000012974	-	98	65.546	Ficedula_albicollis
ENSCPBG00000020255	SNAI2	100	94.403	ENSFDAG00000016958	SNAI2	100	94.403	Fukomys_damarensis
ENSCPBG00000020255	SNAI2	100	100.000	ENSGAGG00000000426	SNAI2	100	100.000	Gopherus_agassizii
ENSCPBG00000020255	SNAI2	99	52.397	ENSGAGG00000023571	SNAI3	99	52.397	Gopherus_agassizii
ENSCPBG00000020255	SNAI2	100	93.657	ENSGGOG00000000959	SNAI2	100	93.657	Gorilla_gorilla
ENSCPBG00000020255	SNAI2	100	72.862	ENSHCOG00000019435	SNAI2	100	74.721	Hippocampus_comes
ENSCPBG00000020255	SNAI2	100	70.896	ENSIPUG00000000131	snai2	100	70.522	Ictalurus_punctatus
ENSCPBG00000020255	SNAI2	100	94.776	ENSSTOG00000028743	SNAI2	100	94.776	Ictidomys_tridecemlineatus
ENSCPBG00000020255	SNAI2	99	47.440	ENSJJAG00000019934	Snai3	99	46.622	Jaculus_jaculus
ENSCPBG00000020255	SNAI2	100	89.179	ENSLOCG00000005992	SNAI2	100	89.179	Lepisosteus_oculatus
ENSCPBG00000020255	SNAI2	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSCPBG00000020255	SNAI2	100	95.896	ENSLAFG00000009299	SNAI2	100	95.896	Loxodonta_africana
ENSCPBG00000020255	SNAI2	99	57.565	ENSLAFG00000005117	SNAI3	99	57.565	Loxodonta_africana
ENSCPBG00000020255	SNAI2	99	49.660	ENSMFAG00000032064	SNAI3	99	49.660	Macaca_fascicularis
ENSCPBG00000020255	SNAI2	100	93.657	ENSMFAG00000046061	SNAI2	100	93.657	Macaca_fascicularis
ENSCPBG00000020255	SNAI2	100	93.657	ENSMMUG00000016195	SNAI2	100	93.657	Macaca_mulatta
ENSCPBG00000020255	SNAI2	99	49.660	ENSMMUG00000008716	SNAI3	99	49.660	Macaca_mulatta
ENSCPBG00000020255	SNAI2	100	93.657	ENSMNEG00000034216	SNAI2	100	93.657	Macaca_nemestrina
ENSCPBG00000020255	SNAI2	99	49.660	ENSMNEG00000045515	SNAI3	99	49.660	Macaca_nemestrina
ENSCPBG00000020255	SNAI2	100	93.657	ENSMLEG00000034407	SNAI2	100	93.657	Mandrillus_leucophaeus
ENSCPBG00000020255	SNAI2	99	46.575	ENSMAUG00000001685	Snai3	99	46.154	Mesocricetus_auratus
ENSCPBG00000020255	SNAI2	100	92.164	ENSMAUG00000008119	Snai2	100	92.164	Mesocricetus_auratus
ENSCPBG00000020255	SNAI2	100	92.537	ENSMOCG00000006622	Snai2	100	92.537	Microtus_ochrogaster
ENSCPBG00000020255	SNAI2	100	96.269	ENSMODG00000010173	SNAI2	100	96.269	Monodelphis_domestica
ENSCPBG00000020255	SNAI2	100	91.822	MGP_CAROLIEiJ_G0020483	Snai2	100	91.822	Mus_caroli
ENSCPBG00000020255	SNAI2	100	91.822	ENSMUSG00000022676	Snai2	100	91.822	Mus_musculus
ENSCPBG00000020255	SNAI2	100	91.822	MGP_PahariEiJ_G0016188	Snai2	100	91.822	Mus_pahari
ENSCPBG00000020255	SNAI2	100	92.193	MGP_SPRETEiJ_G0021379	Snai2	100	92.193	Mus_spretus
ENSCPBG00000020255	SNAI2	100	95.149	ENSMPUG00000010793	SNAI2	100	95.149	Mustela_putorius_furo
ENSCPBG00000020255	SNAI2	99	48.611	ENSMPUG00000008104	SNAI3	99	48.611	Mustela_putorius_furo
ENSCPBG00000020255	SNAI2	100	92.910	ENSMLUG00000001086	SNAI2	100	92.910	Myotis_lucifugus
ENSCPBG00000020255	SNAI2	99	46.128	ENSNGAG00000023039	Snai3	99	48.148	Nannospalax_galili
ENSCPBG00000020255	SNAI2	99	49.320	ENSNLEG00000000595	SNAI3	99	50.000	Nomascus_leucogenys
ENSCPBG00000020255	SNAI2	100	93.657	ENSNLEG00000013421	SNAI2	100	93.657	Nomascus_leucogenys
ENSCPBG00000020255	SNAI2	97	96.169	ENSMEUG00000009510	SNAI2	100	96.169	Notamacropus_eugenii
ENSCPBG00000020255	SNAI2	100	95.149	ENSOANG00000007267	SNAI2	100	95.149	Ornithorhynchus_anatinus
ENSCPBG00000020255	SNAI2	99	49.477	ENSOGAG00000000419	SNAI3	99	48.475	Otolemur_garnettii
ENSCPBG00000020255	SNAI2	100	89.552	ENSOARG00000013030	SNAI2	100	89.552	Ovis_aries
ENSCPBG00000020255	SNAI2	99	48.299	ENSPPAG00000043301	SNAI3	99	46.488	Pan_paniscus
ENSCPBG00000020255	SNAI2	100	93.657	ENSPPAG00000015662	SNAI2	100	93.657	Pan_paniscus
ENSCPBG00000020255	SNAI2	100	94.776	ENSPPRG00000012562	-	100	94.776	Panthera_pardus
ENSCPBG00000020255	SNAI2	99	46.520	ENSPPRG00000008511	SNAI3	99	46.209	Panthera_pardus
ENSCPBG00000020255	SNAI2	90	95.041	ENSPTIG00000007593	SNAI2	77	95.041	Panthera_tigris_altaica
ENSCPBG00000020255	SNAI2	100	93.657	ENSPTRG00000020235	SNAI2	100	93.657	Pan_troglodytes
ENSCPBG00000020255	SNAI2	99	49.660	ENSPANG00000000509	SNAI3	99	47.557	Papio_anubis
ENSCPBG00000020255	SNAI2	100	93.657	ENSPANG00000017540	SNAI2	100	93.657	Papio_anubis
ENSCPBG00000020255	SNAI2	100	86.940	ENSPKIG00000002254	SNAI2	100	86.940	Paramormyrops_kingsleyae
ENSCPBG00000020255	SNAI2	99	54.325	ENSPKIG00000007872	SNAI3	99	54.671	Paramormyrops_kingsleyae
ENSCPBG00000020255	SNAI2	86	57.872	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSCPBG00000020255	SNAI2	100	99.627	ENSPSIG00000016395	SNAI2	100	99.627	Pelodiscus_sinensis
ENSCPBG00000020255	SNAI2	100	79.478	ENSPMGG00000013179	SNAI2	100	77.985	Periophthalmus_magnuspinnatus
ENSCPBG00000020255	SNAI2	100	92.164	ENSPEMG00000011739	Snai2	100	92.164	Peromyscus_maniculatus_bairdii
ENSCPBG00000020255	SNAI2	100	96.642	ENSPCIG00000025156	SNAI2	100	96.642	Phascolarctos_cinereus
ENSCPBG00000020255	SNAI2	90	80.579	ENSPREG00000008528	SNAI2	86	78.926	Poecilia_reticulata
ENSCPBG00000020255	SNAI2	100	93.657	ENSPPYG00000018578	SNAI2	100	93.657	Pongo_abelii
ENSCPBG00000020255	SNAI2	99	48.860	ENSPPYG00000007643	SNAI3	99	47.458	Pongo_abelii
ENSCPBG00000020255	SNAI2	100	95.149	ENSPCOG00000015656	SNAI2	100	95.149	Propithecus_coquereli
ENSCPBG00000020255	SNAI2	100	94.776	ENSPVAG00000009457	SNAI2	100	94.776	Pteropus_vampyrus
ENSCPBG00000020255	SNAI2	99	45.890	ENSRNOG00000013586	Snai3	99	47.797	Rattus_norvegicus
ENSCPBG00000020255	SNAI2	100	93.657	ENSRBIG00000041133	SNAI2	100	93.657	Rhinopithecus_bieti
ENSCPBG00000020255	SNAI2	99	49.320	ENSRBIG00000025770	SNAI3	99	47.557	Rhinopithecus_bieti
ENSCPBG00000020255	SNAI2	100	93.657	ENSRROG00000032273	SNAI2	100	93.657	Rhinopithecus_roxellana
ENSCPBG00000020255	SNAI2	99	47.231	ENSRROG00000032757	SNAI3	99	46.906	Rhinopithecus_roxellana
ENSCPBG00000020255	SNAI2	100	93.657	ENSSBOG00000035774	SNAI2	100	93.657	Saimiri_boliviensis_boliviensis
ENSCPBG00000020255	SNAI2	100	96.642	ENSSHAG00000004205	SNAI2	100	96.642	Sarcophilus_harrisii
ENSCPBG00000020255	SNAI2	99	50.825	ENSSFOG00015016115	snai3	93	50.662	Scleropages_formosus
ENSCPBG00000020255	SNAI2	100	85.926	ENSSFOG00015018025	SNAI2	100	85.926	Scleropages_formosus
ENSCPBG00000020255	SNAI2	100	98.134	ENSSPUG00000005427	-	100	98.134	Sphenodon_punctatus
ENSCPBG00000020255	SNAI2	100	91.418	ENSSSCG00000039568	SNAI2	100	91.418	Sus_scrofa
ENSCPBG00000020255	SNAI2	86	95.217	ENSUAMG00000014942	SNAI2	100	95.217	Ursus_americanus
ENSCPBG00000020255	SNAI2	99	50.865	ENSUAMG00000020030	SNAI3	99	49.502	Ursus_americanus
ENSCPBG00000020255	SNAI2	98	94.677	ENSUMAG00000006525	SNAI2	100	94.677	Ursus_maritimus
ENSCPBG00000020255	SNAI2	99	48.797	ENSVVUG00000003233	SNAI3	99	48.454	Vulpes_vulpes
ENSCPBG00000020255	SNAI2	100	94.776	ENSVVUG00000017625	SNAI2	100	94.776	Vulpes_vulpes
ENSCPBG00000020255	SNAI2	100	90.672	ENSXETG00000024006	snai2	100	90.672	Xenopus_tropicalis