EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCPBG00000020377 (Gene tree)
Gene ID
101944653
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Chrysemys_picta_bellii
Status
putative
Strand
Minus strand
Length
46698 bases
Position
chrKK082936.1:7526210-7572907
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPBP00000028888tRNA_anti-codonPF01336.256.5e-1211
ENSCPBP00000028886tRNA_anti-codonPF01336.256.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPBT00000034000RPA1-2012817XM_005298280ENSCPBP00000028886616 (aa)XP_005298337UPI000388C85D
ENSCPBT00000034002RPA1-2023308-ENSCPBP00000028888572 (aa)--
Gene Model
Click here to download ENSCPBG00000020377's gene model file
Pathways
Pathway IDPathway NameSource
cpic03030DNA replicationKEGG
cpic03420Nucleotide excision repairKEGG
cpic03430Mismatch repairKEGG
cpic03440Homologous recombinationKEGG
cpic03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020377's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPBG00000020377RPA19962.807ENSAPOG00000011658rpa19962.193Acanthochromis_polyacanthus
ENSCPBG00000020377RPA19860.494ENSAPOG00000019409RPA19360.494Acanthochromis_polyacanthus
ENSCPBG00000020377RPA19978.634ENSAMEG00000007706RPA19977.087Ailuropoda_melanoleuca
ENSCPBG00000020377RPA19958.275ENSACIG00000007277rpa19957.922Amphilophus_citrinellus
ENSCPBG00000020377RPA19957.867ENSACIG00000012881RPA19957.555Amphilophus_citrinellus
ENSCPBG00000020377RPA19964.572ENSAOCG00000023376rpa110063.621Amphiprion_ocellaris
ENSCPBG00000020377RPA19955.611ENSAOCG00000009003RPA19955.077Amphiprion_ocellaris
ENSCPBG00000020377RPA19954.106ENSAPEG00000019132RPA19953.684Amphiprion_percula
ENSCPBG00000020377RPA19964.747ENSAPEG00000008634rpa19963.793Amphiprion_percula
ENSCPBG00000020377RPA19964.035ENSATEG00000022024rpa110064.151Anabas_testudineus
ENSCPBG00000020377RPA19956.743ENSATEG00000006443RPA19955.368Anabas_testudineus
ENSCPBG00000020377RPA19986.253ENSAPLG00000012442RPA110063.864Anas_platyrhynchos
ENSCPBG00000020377RPA19967.097ENSACAG00000014490RPA19967.903Anolis_carolinensis
ENSCPBG00000020377RPA19977.504ENSANAG00000023456RPA19976.539Aotus_nancymaae
ENSCPBG00000020377RPA19957.789ENSACLG00000005223RPA19956.630Astatotilapia_calliptera
ENSCPBG00000020377RPA19964.965ENSACLG00000006640rpa19964.983Astatotilapia_calliptera
ENSCPBG00000020377RPA19963.158ENSAMXG00000008418rpa110062.215Astyanax_mexicanus
ENSCPBG00000020377RPA19977.719ENSBTAG00000009711RPA19977.073Bos_taurus
ENSCPBG00000020377RPA19976.450ENSCJAG00000001848RPA19976.221Callithrix_jacchus
ENSCPBG00000020377RPA19978.421ENSCAFG00000019249RPA19977.886Canis_familiaris
ENSCPBG00000020377RPA19978.421ENSCAFG00020009847RPA19977.886Canis_lupus_dingo
ENSCPBG00000020377RPA19977.504ENSCHIG00000026308RPA19977.561Capra_hircus
ENSCPBG00000020377RPA19978.634ENSTSYG00000003482-9978.084Carlito_syrichta
ENSCPBG00000020377RPA19976.801ENSCPOG00000000035RPA19976.059Cavia_porcellus
ENSCPBG00000020377RPA19962.561ENSCCAG00000010981RPA19963.209Cebus_capucinus
ENSCPBG00000020377RPA19977.680ENSCLAG00000005185-9977.199Chinchilla_lanigera
ENSCPBG00000020377RPA19973.286ENSCLAG00000015045-9973.127Chinchilla_lanigera
ENSCPBG00000020377RPA19962.237ENSCSAG00000013833RPA19962.885Chlorocebus_sabaeus
ENSCPBG00000020377RPA17781.507ENSCHOG00000009454-9981.507Choloepus_hoffmanni
ENSCPBG00000020377RPA19975.614ENSCHOG00000013540-9975.468Choloepus_hoffmanni
ENSCPBG00000020377RPA19943.608ENSCING00000023482-9942.532Ciona_intestinalis
ENSCPBG00000020377RPA19974.648ENSCANG00000030911RPA19974.419Colobus_angolensis_palliatus
ENSCPBG00000020377RPA19978.360ENSCGRG00001008197Rpa19977.832Cricetulus_griseus_chok1gshd
ENSCPBG00000020377RPA18878.304ENSCGRG00000000582Rpa19978.304Cricetulus_griseus_crigri
ENSCPBG00000020377RPA19953.898ENSCSEG00000012726RPA19853.820Cynoglossus_semilaevis
ENSCPBG00000020377RPA19961.431ENSCSEG00000013066rpa19960.912Cynoglossus_semilaevis
ENSCPBG00000020377RPA19553.477ENSCVAG00000013446-9652.160Cyprinodon_variegatus
ENSCPBG00000020377RPA19965.149ENSCVAG00000019431rpa19964.274Cyprinodon_variegatus
ENSCPBG00000020377RPA19962.281ENSDARG00000003938rpa110061.564Danio_rerio
ENSCPBG00000020377RPA19978.634ENSDNOG00000017218RPA19977.961Dasypus_novemcinctus
ENSCPBG00000020377RPA19978.246ENSDORG00000006199Rpa19977.724Dipodomys_ordii
ENSCPBG00000020377RPA19941.721FBgn0010173RpA-709842.258Drosophila_melanogaster
ENSCPBG00000020377RPA18280.412ENSETEG00000017608RPA18280.412Echinops_telfairi
ENSCPBG00000020377RPA19979.335ENSEASG00005009372RPA19878.347Equus_asinus_asinus
ENSCPBG00000020377RPA19979.474ENSECAG00000023886RPA19978.699Equus_caballus
ENSCPBG00000020377RPA17380.383ENSEEUG00000002186-6880.383Erinaceus_europaeus
ENSCPBG00000020377RPA19963.398ENSELUG00000021071rpa19962.500Esox_lucius
ENSCPBG00000020377RPA19557.847ENSELUG00000006136RPA110057.587Esox_lucius
ENSCPBG00000020377RPA19977.487ENSFCAG00000006306RPA110077.023Felis_catus
ENSCPBG00000020377RPA110085.739ENSFALG00000006575RPA110085.622Ficedula_albicollis
ENSCPBG00000020377RPA19977.504ENSFDAG00000007720RPA19976.710Fukomys_damarensis
ENSCPBG00000020377RPA19963.428ENSFHEG00000003580rpa19962.706Fundulus_heteroclitus
ENSCPBG00000020377RPA19961.687ENSGMOG00000010382rpa110059.967Gadus_morhua
ENSCPBG00000020377RPA110085.413ENSGALG00000003072RPA110085.413Gallus_gallus
ENSCPBG00000020377RPA19955.032ENSGAFG00000020953RPA19954.766Gambusia_affinis
ENSCPBG00000020377RPA19964.021ENSGAFG00000012916rpa19963.262Gambusia_affinis
ENSCPBG00000020377RPA19962.522ENSGACG00000010856rpa19961.990Gasterosteus_aculeatus
ENSCPBG00000020377RPA110098.776ENSGAGG00000013611RPA110098.539Gopherus_agassizii
ENSCPBG00000020377RPA19974.692ENSGGOG00000014186RPA19974.430Gorilla_gorilla
ENSCPBG00000020377RPA19965.845ENSHBUG00000017773rpa19964.860Haplochromis_burtoni
ENSCPBG00000020377RPA19952.972ENSHBUG00000009348RPA19952.517Haplochromis_burtoni
ENSCPBG00000020377RPA19977.329ENSHGLG00000008846RPA110077.199Heterocephalus_glaber_female
ENSCPBG00000020377RPA19977.329ENSHGLG00100017755-10077.199Heterocephalus_glaber_male
ENSCPBG00000020377RPA19966.316ENSHGLG00100002005-9966.016Heterocephalus_glaber_male
ENSCPBG00000020377RPA19973.333ENSHGLG00100000799-9972.520Heterocephalus_glaber_male
ENSCPBG00000020377RPA19945.043ENSHCOG00000000351RPA19944.194Hippocampus_comes
ENSCPBG00000020377RPA19960.808ENSHCOG00000001401rpa19959.967Hippocampus_comes
ENSCPBG00000020377RPA19962.105ENSIPUG00000004400rpa19961.401Ictalurus_punctatus
ENSCPBG00000020377RPA19875.263ENSSTOG00000022475RPA19575.263Ictidomys_tridecemlineatus
ENSCPBG00000020377RPA19977.368ENSJJAG00000000876Rpa19877.304Jaculus_jaculus
ENSCPBG00000020377RPA19956.055ENSKMAG00000000234RPA19954.647Kryptolebias_marmoratus
ENSCPBG00000020377RPA19962.500ENSKMAG00000005605rpa19961.201Kryptolebias_marmoratus
ENSCPBG00000020377RPA19665.682ENSLBEG00000002281RPA18465.682Labrus_bergylta
ENSCPBG00000020377RPA19963.972ENSLBEG00000021604rpa19963.072Labrus_bergylta
ENSCPBG00000020377RPA18768.663ENSLACG00000007210RPA19968.663Latimeria_chalumnae
ENSCPBG00000020377RPA19967.958ENSLOCG00000006397rpa19966.340Lepisosteus_oculatus
ENSCPBG00000020377RPA19977.163ENSLAFG00000015354RPA19975.806Loxodonta_africana
ENSCPBG00000020377RPA18276.059ENSMFAG00000036138-10075.889Macaca_fascicularis
ENSCPBG00000020377RPA19976.801ENSMMUG00000011604-9976.617Macaca_mulatta
ENSCPBG00000020377RPA19971.002ENSMMUG00000002442-9970.033Macaca_mulatta
ENSCPBG00000020377RPA19963.740ENSMNEG00000029837-9963.740Macaca_nemestrina
ENSCPBG00000020377RPA19976.098ENSMNEG00000031632-9974.551Macaca_nemestrina
ENSCPBG00000020377RPA19971.154ENSMLEG00000038768-9971.358Mandrillus_leucophaeus
ENSCPBG00000020377RPA19963.158ENSMAMG00000017993rpa19962.193Mastacembelus_armatus
ENSCPBG00000020377RPA19263.426ENSMAMG00000020097RPA19359.053Mastacembelus_armatus
ENSCPBG00000020377RPA19966.197ENSMZEG00005007551rpa19965.189Maylandia_zebra
ENSCPBG00000020377RPA19957.789ENSMZEG00005024731RPA19956.630Maylandia_zebra
ENSCPBG00000020377RPA110085.166ENSMGAG00000005315RPA19984.691Meleagris_gallopavo
ENSCPBG00000020377RPA19978.345ENSMAUG00000010474Rpa19978.000Mesocricetus_auratus
ENSCPBG00000020377RPA19977.544ENSMICG00000012867RPA19976.911Microcebus_murinus
ENSCPBG00000020377RPA19977.465ENSMOCG00000013019Rpa19976.835Microtus_ochrogaster
ENSCPBG00000020377RPA19962.456ENSMMOG00000014292rpa19962.500Mola_mola
ENSCPBG00000020377RPA19956.567ENSMMOG00000010868RPA19861.247Mola_mola
ENSCPBG00000020377RPA19981.436ENSMODG00000010549RPA19980.682Monodelphis_domestica
ENSCPBG00000020377RPA19964.448ENSMALG00000011453rpa19963.725Monopterus_albus
ENSCPBG00000020377RPA19063.532ENSMALG00000001208RPA17763.532Monopterus_albus
ENSCPBG00000020377RPA19976.883MGP_CAROLIEiJ_G0016734Rpa19976.461Mus_caroli
ENSCPBG00000020377RPA19976.430ENSMUSG00000000751Rpa19975.241Mus_musculus
ENSCPBG00000020377RPA19977.178MGP_PahariEiJ_G0017871Rpa19976.575Mus_pahari
ENSCPBG00000020377RPA19976.298MGP_SPRETEiJ_G0017577Rpa19975.120Mus_spretus
ENSCPBG00000020377RPA19978.809ENSMPUG00000013119RPA19978.084Mustela_putorius_furo
ENSCPBG00000020377RPA19977.856ENSMLUG00000006113RPA19975.606Myotis_lucifugus
ENSCPBG00000020377RPA19978.634ENSNGAG00000004522Rpa19478.401Nannospalax_galili
ENSCPBG00000020377RPA19964.613ENSNBRG00000020595rpa19964.879Neolamprologus_brichardi
ENSCPBG00000020377RPA19956.918ENSNBRG00000009672RPA19755.941Neolamprologus_brichardi
ENSCPBG00000020377RPA19976.667ENSNLEG00000017149RPA19977.073Nomascus_leucogenys
ENSCPBG00000020377RPA19969.542ENSMEUG00000006714RPA19969.000Notamacropus_eugenii
ENSCPBG00000020377RPA19975.952ENSODEG00000009038RPA19675.798Octodon_degus
ENSCPBG00000020377RPA19965.505ENSONIG00000013135rpa19964.553Oreochromis_niloticus
ENSCPBG00000020377RPA19980.628ENSOANG00000010880RPA19980.000Ornithorhynchus_anatinus
ENSCPBG00000020377RPA19976.127ENSOCUG00000001504RPA19975.311Oryctolagus_cuniculus
ENSCPBG00000020377RPA19955.065ENSORLG00000003368RPA19953.963Oryzias_latipes
ENSCPBG00000020377RPA19963.445ENSORLG00000004856rpa19962.623Oryzias_latipes
ENSCPBG00000020377RPA19963.445ENSORLG00020008980rpa19962.623Oryzias_latipes_hni
ENSCPBG00000020377RPA19953.526ENSORLG00020015284RPA19952.545Oryzias_latipes_hni
ENSCPBG00000020377RPA19963.445ENSORLG00015013982rpa19962.623Oryzias_latipes_hsok
ENSCPBG00000020377RPA19956.000ENSORLG00015020383RPA19954.814Oryzias_latipes_hsok
ENSCPBG00000020377RPA17661.663ENSORLG00015005867-9761.663Oryzias_latipes_hsok
ENSCPBG00000020377RPA19957.217ENSOMEG00000011040RPA19956.633Oryzias_melastigma
ENSCPBG00000020377RPA19962.456ENSOMEG00000004704rpa19961.866Oryzias_melastigma
ENSCPBG00000020377RPA19977.368ENSOGAG00000005581-9976.748Otolemur_garnettii
ENSCPBG00000020377RPA19373.333ENSOGAG00000029379-9982.979Otolemur_garnettii
ENSCPBG00000020377RPA19977.504ENSOARG00000014479RPA19977.561Ovis_aries
ENSCPBG00000020377RPA19976.667ENSPPAG00000039680RPA19976.911Pan_paniscus
ENSCPBG00000020377RPA19977.661ENSPPRG00000011807RPA110077.184Panthera_pardus
ENSCPBG00000020377RPA19977.312ENSPTIG00000007898RPA110076.861Panthera_tigris_altaica
ENSCPBG00000020377RPA19976.667ENSPTRG00000008539RPA19976.911Pan_troglodytes
ENSCPBG00000020377RPA19976.626ENSPANG00000024592RPA19976.710Papio_anubis
ENSCPBG00000020377RPA19462.570ENSPKIG00000008053rpa19462.222Paramormyrops_kingsleyae
ENSCPBG00000020377RPA110094.056ENSPSIG00000015617RPA110094.030Pelodiscus_sinensis
ENSCPBG00000020377RPA19963.028ENSPMGG00000011589rpa19961.412Periophthalmus_magnuspinnatus
ENSCPBG00000020377RPA19957.522ENSPMGG00000000543RPA19957.522Periophthalmus_magnuspinnatus
ENSCPBG00000020377RPA19977.817ENSPEMG00000021061Rpa19977.162Peromyscus_maniculatus_bairdii
ENSCPBG00000020377RPA19980.526ENSPCIG00000019049RPA19979.837Phascolarctos_cinereus
ENSCPBG00000020377RPA19964.727ENSPFOG00000003987rpa19963.875Poecilia_formosa
ENSCPBG00000020377RPA19455.250ENSPLAG00000008844-9754.560Poecilia_latipinna
ENSCPBG00000020377RPA19964.789ENSPLAG00000004984rpa19963.934Poecilia_latipinna
ENSCPBG00000020377RPA19964.727ENSPMEG00000020602rpa19963.875Poecilia_mexicana
ENSCPBG00000020377RPA19454.861ENSPMEG00000003627-9754.647Poecilia_mexicana
ENSCPBG00000020377RPA19953.797ENSPREG00000010119RPA110052.713Poecilia_reticulata
ENSCPBG00000020377RPA19457.090ENSPREG00000010174rpa19655.842Poecilia_reticulata
ENSCPBG00000020377RPA19977.719ENSPCOG00000001799RPA19977.073Propithecus_coquereli
ENSCPBG00000020377RPA19978.070ENSPVAG00000002149RPA19977.398Pteropus_vampyrus
ENSCPBG00000020377RPA19957.454ENSPNYG00000024165RPA19956.318Pundamilia_nyererei
ENSCPBG00000020377RPA19966.021ENSPNYG00000016316rpa19965.043Pundamilia_nyererei
ENSCPBG00000020377RPA19955.342ENSPNAG00000008599rpa110053.612Pygocentrus_nattereri
ENSCPBG00000020377RPA19984.058ENSRNOG00000003123Rpa19978.467Rattus_norvegicus
ENSCPBG00000020377RPA19976.977ENSRBIG00000036587RPA19976.547Rhinopithecus_bieti
ENSCPBG00000020377RPA19971.178ENSRROG00000043278RPA19971.173Rhinopithecus_roxellana
ENSCPBG00000020377RPA19732.362YAR007CRFA19731.981Saccharomyces_cerevisiae
ENSCPBG00000020377RPA19877.102ENSSBOG00000030233RPA19777.818Saimiri_boliviensis_boliviensis
ENSCPBG00000020377RPA19981.086ENSSHAG00000007969RPA19880.656Sarcophilus_harrisii
ENSCPBG00000020377RPA19965.439ENSSFOG00015005362rpa19264.169Scleropages_formosus
ENSCPBG00000020377RPA19953.710ENSSMAG00000019746RPA19953.012Scophthalmus_maximus
ENSCPBG00000020377RPA19954.003ENSSDUG00000016358RPA19953.598Seriola_dumerili
ENSCPBG00000020377RPA19964.211ENSSDUG00000011949rpa19963.339Seriola_dumerili
ENSCPBG00000020377RPA19953.281ENSSLDG00000020784RPA18466.895Seriola_lalandi_dorsalis
ENSCPBG00000020377RPA19964.386ENSSLDG00000011806rpa19963.502Seriola_lalandi_dorsalis
ENSCPBG00000020377RPA18778.125ENSSARG00000007506RPA18978.125Sorex_araneus
ENSCPBG00000020377RPA110084.441ENSSPUG00000007223RPA110083.748Sphenodon_punctatus
ENSCPBG00000020377RPA19959.011ENSSPAG00000011165RPA19956.956Stegastes_partitus
ENSCPBG00000020377RPA19963.333ENSSPAG00000009903rpa19962.848Stegastes_partitus
ENSCPBG00000020377RPA19978.383ENSSSCG00000017822RPA19978.239Sus_scrofa
ENSCPBG00000020377RPA110085.864ENSTGUG00000005775RPA110085.737Taeniopygia_guttata
ENSCPBG00000020377RPA19964.203ENSTRUG00000000405RPA19757.418Takifugu_rubripes
ENSCPBG00000020377RPA19965.789ENSTRUG00000003616rpa19964.918Takifugu_rubripes
ENSCPBG00000020377RPA19966.084ENSTNIG00000016199rpa19965.416Tetraodon_nigroviridis
ENSCPBG00000020377RPA18775.510ENSTBEG00000002709RPA18875.510Tupaia_belangeri
ENSCPBG00000020377RPA19977.273ENSTTRG00000001169RPA110077.383Tursiops_truncatus
ENSCPBG00000020377RPA18986.538ENSUAMG00000015676RPA19786.538Ursus_americanus
ENSCPBG00000020377RPA19978.947ENSUMAG00000009328RPA19978.374Ursus_maritimus
ENSCPBG00000020377RPA19976.977ENSVPAG00000009443RPA19975.856Vicugna_pacos
ENSCPBG00000020377RPA19978.246ENSVVUG00000021715RPA19977.561Vulpes_vulpes
ENSCPBG00000020377RPA19973.333ENSXETG00000013538rpa19973.115Xenopus_tropicalis
ENSCPBG00000020377RPA19957.746ENSXCOG00000009899-9957.534Xiphophorus_couchianus
ENSCPBG00000020377RPA19461.567ENSXCOG00000010068rpa19461.664Xiphophorus_couchianus
ENSCPBG00000020377RPA19165.227ENSXMAG00000010333RPA18365.227Xiphophorus_maculatus
ENSCPBG00000020377RPA19963.540ENSXMAG00000004102rpa19963.540Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us