EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000020535 (Gene tree)
Gene ID: 101944930
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 20001 bases
Position: chrKK088194.1:422942-442942
Accession: 4055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029108	SAP	PF02037.27	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000034274	XRCC6-201	3068	-	ENSCPBP00000029108	610 (aa)	XP_005302658	UPI000388E988

Gene Model

Click here to download ENSCPBG00000020535's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020535	XRCC6	99	74.220	ENSG00000196419	XRCC6	99	74.056	Homo_sapiens
ENSCPBG00000020535	XRCC6	99	58.649	ENSAPOG00000012704	xrcc6	99	58.484	Acanthochromis_polyacanthus
ENSCPBG00000020535	XRCC6	99	59.308	ENSACIG00000021277	xrcc6	99	59.638	Amphilophus_citrinellus
ENSCPBG00000020535	XRCC6	99	58.553	ENSAOCG00000021344	xrcc6	99	58.553	Amphiprion_ocellaris
ENSCPBG00000020535	XRCC6	99	59.046	ENSAPEG00000020712	xrcc6	99	59.046	Amphiprion_percula
ENSCPBG00000020535	XRCC6	99	58.007	ENSATEG00000007119	xrcc6	99	58.333	Anabas_testudineus
ENSCPBG00000020535	XRCC6	90	81.752	ENSAPLG00000004469	XRCC6	99	81.752	Anas_platyrhynchos
ENSCPBG00000020535	XRCC6	99	65.404	ENSANAG00000020017	-	99	65.404	Aotus_nancymaae
ENSCPBG00000020535	XRCC6	99	62.726	ENSANAG00000023445	-	99	62.397	Aotus_nancymaae
ENSCPBG00000020535	XRCC6	99	64.803	ENSANAG00000035230	-	99	64.474	Aotus_nancymaae
ENSCPBG00000020535	XRCC6	99	74.056	ENSANAG00000018684	XRCC6	99	73.727	Aotus_nancymaae
ENSCPBG00000020535	XRCC6	99	58.484	ENSACLG00000018608	xrcc6	99	58.814	Astatotilapia_calliptera
ENSCPBG00000020535	XRCC6	99	61.601	ENSAMXG00000007545	xrcc6	100	61.601	Astyanax_mexicanus
ENSCPBG00000020535	XRCC6	99	74.220	ENSCJAG00000045512	XRCC6	99	73.892	Callithrix_jacchus
ENSCPBG00000020535	XRCC6	99	74.098	ENSTSYG00000011348	XRCC6	99	74.098	Carlito_syrichta
ENSCPBG00000020535	XRCC6	99	58.128	ENSCCAG00000035711	-	99	57.800	Cebus_capucinus
ENSCPBG00000020535	XRCC6	100	69.771	ENSCCAG00000030041	-	95	69.608	Cebus_capucinus
ENSCPBG00000020535	XRCC6	99	61.349	ENSCCAG00000037663	-	97	61.184	Cebus_capucinus
ENSCPBG00000020535	XRCC6	91	74.766	ENSCCAG00000030468	-	99	74.143	Cebus_capucinus
ENSCPBG00000020535	XRCC6	99	74.220	ENSCATG00000042366	XRCC6	98	75.086	Cercocebus_atys
ENSCPBG00000020535	XRCC6	99	74.918	ENSCLAG00000016669	XRCC6	99	74.918	Chinchilla_lanigera
ENSCPBG00000020535	XRCC6	99	74.220	ENSCSAG00000005784	XRCC6	99	74.056	Chlorocebus_sabaeus
ENSCPBG00000020535	XRCC6	99	35.703	ENSCING00000000633	-	96	36.074	Ciona_intestinalis
ENSCPBG00000020535	XRCC6	99	74.220	ENSCANG00000031032	XRCC6	99	74.056	Colobus_angolensis_palliatus
ENSCPBG00000020535	XRCC6	99	67.323	ENSCGRG00001019029	Xrcc6	99	67.323	Cricetulus_griseus_chok1gshd
ENSCPBG00000020535	XRCC6	99	73.563	ENSCGRG00000001528	Xrcc6	99	73.563	Cricetulus_griseus_crigri
ENSCPBG00000020535	XRCC6	99	57.026	ENSCSEG00000020434	xrcc6	99	57.026	Cynoglossus_semilaevis
ENSCPBG00000020535	XRCC6	99	60.755	ENSCVAG00000002189	xrcc6	99	60.755	Cyprinodon_variegatus
ENSCPBG00000020535	XRCC6	99	61.401	ENSDARG00000071551	xrcc6	100	61.238	Danio_rerio
ENSCPBG00000020535	XRCC6	78	73.846	ENSETEG00000015333	-	78	75.385	Echinops_telfairi
ENSCPBG00000020535	XRCC6	99	75.534	ENSEASG00005001514	XRCC6	99	75.534	Equus_asinus_asinus
ENSCPBG00000020535	XRCC6	99	74.877	ENSECAG00000017563	XRCC6	99	74.600	Equus_caballus
ENSCPBG00000020535	XRCC6	99	58.007	ENSELUG00000020301	xrcc6	99	58.007	Esox_lucius
ENSCPBG00000020535	XRCC6	99	78.303	ENSFALG00000011908	XRCC6	97	78.303	Ficedula_albicollis
ENSCPBG00000020535	XRCC6	99	59.934	ENSFHEG00000016833	xrcc6	99	59.934	Fundulus_heteroclitus
ENSCPBG00000020535	XRCC6	99	50.820	ENSGMOG00000013524	xrcc6	99	50.820	Gadus_morhua
ENSCPBG00000020535	XRCC6	99	78.630	ENSGALG00000011932	XRCC6	99	78.956	Gallus_gallus
ENSCPBG00000020535	XRCC6	99	58.785	ENSGAFG00000008130	xrcc6	99	58.621	Gambusia_affinis
ENSCPBG00000020535	XRCC6	99	57.305	ENSGACG00000004868	xrcc6	99	57.305	Gasterosteus_aculeatus
ENSCPBG00000020535	XRCC6	100	97.213	ENSGAGG00000017518	XRCC6	100	97.213	Gopherus_agassizii
ENSCPBG00000020535	XRCC6	99	74.220	ENSGGOG00000015885	XRCC6	99	74.056	Gorilla_gorilla
ENSCPBG00000020535	XRCC6	91	59.180	ENSHBUG00000023281	xrcc6	99	59.180	Haplochromis_burtoni
ENSCPBG00000020535	XRCC6	99	73.770	ENSHGLG00000018078	XRCC6	99	73.443	Heterocephalus_glaber_female
ENSCPBG00000020535	XRCC6	99	73.770	ENSHGLG00100011264	XRCC6	99	73.443	Heterocephalus_glaber_male
ENSCPBG00000020535	XRCC6	99	55.810	ENSHCOG00000009821	xrcc6	99	55.974	Hippocampus_comes
ENSCPBG00000020535	XRCC6	99	61.011	ENSIPUG00000000767	xrcc6	96	61.565	Ictalurus_punctatus
ENSCPBG00000020535	XRCC6	99	76.190	ENSSTOG00000009490	XRCC6	99	76.190	Ictidomys_tridecemlineatus
ENSCPBG00000020535	XRCC6	99	68.309	ENSJJAG00000017136	Xrcc6	99	69.458	Jaculus_jaculus
ENSCPBG00000020535	XRCC6	99	60.197	ENSKMAG00000002141	xrcc6	99	60.033	Kryptolebias_marmoratus
ENSCPBG00000020535	XRCC6	99	58.824	ENSLBEG00000002691	xrcc6	99	58.824	Labrus_bergylta
ENSCPBG00000020535	XRCC6	84	56.731	ENSLOCG00000011533	xrcc6	99	56.731	Lepisosteus_oculatus
ENSCPBG00000020535	XRCC6	99	74.220	ENSMFAG00000003352	XRCC6	99	74.056	Macaca_fascicularis
ENSCPBG00000020535	XRCC6	99	74.220	ENSMMUG00000001856	XRCC6	99	74.056	Macaca_mulatta
ENSCPBG00000020535	XRCC6	99	74.220	ENSMNEG00000035076	XRCC6	99	74.056	Macaca_nemestrina
ENSCPBG00000020535	XRCC6	99	74.220	ENSMLEG00000019869	XRCC6	99	74.056	Mandrillus_leucophaeus
ENSCPBG00000020535	XRCC6	95	56.899	ENSMAMG00000003405	xrcc6	97	56.899	Mastacembelus_armatus
ENSCPBG00000020535	XRCC6	99	56.607	ENSMAMG00000003368	xrcc6	99	56.607	Mastacembelus_armatus
ENSCPBG00000020535	XRCC6	99	58.320	ENSMZEG00005028080	xrcc6	99	58.649	Maylandia_zebra
ENSCPBG00000020535	XRCC6	99	78.990	ENSMGAG00000012146	XRCC6	99	79.316	Meleagris_gallopavo
ENSCPBG00000020535	XRCC6	99	73.235	ENSMAUG00000017340	Xrcc6	100	73.235	Mesocricetus_auratus
ENSCPBG00000020535	XRCC6	99	73.071	ENSMOCG00000015717	Xrcc6	100	73.071	Microtus_ochrogaster
ENSCPBG00000020535	XRCC6	99	56.743	ENSMMOG00000003536	xrcc6	99	56.414	Mola_mola
ENSCPBG00000020535	XRCC6	99	58.979	ENSMALG00000013912	xrcc6	94	58.979	Monopterus_albus
ENSCPBG00000020535	XRCC6	99	68.801	MGP_CAROLIEiJ_G0020067	Xrcc6	99	68.801	Mus_caroli
ENSCPBG00000020535	XRCC6	99	73.399	ENSMUSG00000022471	Xrcc6	99	73.399	Mus_musculus
ENSCPBG00000020535	XRCC6	99	72.742	MGP_PahariEiJ_G0020069	Xrcc6	99	72.742	Mus_pahari
ENSCPBG00000020535	XRCC6	95	73.540	MGP_SPRETEiJ_G0020967	Xrcc6	99	73.540	Mus_spretus
ENSCPBG00000020535	XRCC6	99	71.967	ENSNGAG00000013750	Xrcc6	99	71.967	Nannospalax_galili
ENSCPBG00000020535	XRCC6	99	58.814	ENSNBRG00000004125	xrcc6	99	59.143	Neolamprologus_brichardi
ENSCPBG00000020535	XRCC6	95	73.793	ENSOPRG00000002386	XRCC6	99	73.793	Ochotona_princeps
ENSCPBG00000020535	XRCC6	99	72.742	ENSODEG00000015847	XRCC6	99	72.742	Octodon_degus
ENSCPBG00000020535	XRCC6	99	59.308	ENSONIG00000019715	xrcc6	99	59.308	Oreochromis_niloticus
ENSCPBG00000020535	XRCC6	68	80.676	ENSOANG00000011328	XRCC6	99	80.676	Ornithorhynchus_anatinus
ENSCPBG00000020535	XRCC6	99	73.970	ENSOCUG00000006948	XRCC6	99	73.970	Oryctolagus_cuniculus
ENSCPBG00000020535	XRCC6	99	59.442	ENSORLG00020007820	xrcc6	99	59.278	Oryzias_latipes_hni
ENSCPBG00000020535	XRCC6	99	59.606	ENSORLG00015006406	xrcc6	99	59.442	Oryzias_latipes_hsok
ENSCPBG00000020535	XRCC6	99	59.442	ENSOMEG00000008998	xrcc6	99	59.770	Oryzias_melastigma
ENSCPBG00000020535	XRCC6	99	75.246	ENSOGAG00000008821	XRCC6	100	75.246	Otolemur_garnettii
ENSCPBG00000020535	XRCC6	99	60.920	ENSPPAG00000037167	XRCC6	99	60.755	Pan_paniscus
ENSCPBG00000020535	XRCC6	99	74.220	ENSPTRG00000022548	XRCC6	99	75.086	Pan_troglodytes
ENSCPBG00000020535	XRCC6	99	74.220	ENSPTRG00000045824	XRCC6	99	75.086	Pan_troglodytes
ENSCPBG00000020535	XRCC6	99	74.056	ENSPANG00000001252	XRCC6	99	74.914	Papio_anubis
ENSCPBG00000020535	XRCC6	99	61.011	ENSPKIG00000003974	xrcc6	100	61.011	Paramormyrops_kingsleyae
ENSCPBG00000020535	XRCC6	99	57.119	ENSPMGG00000014220	xrcc6	100	57.285	Periophthalmus_magnuspinnatus
ENSCPBG00000020535	XRCC6	99	72.578	ENSPEMG00000023446	Xrcc6	99	72.578	Peromyscus_maniculatus_bairdii
ENSCPBG00000020535	XRCC6	99	74.507	ENSPCIG00000026409	XRCC6	99	74.507	Phascolarctos_cinereus
ENSCPBG00000020535	XRCC6	99	59.934	ENSPFOG00000017173	xrcc6	99	59.934	Poecilia_formosa
ENSCPBG00000020535	XRCC6	99	59.606	ENSPLAG00000000562	xrcc6	99	59.606	Poecilia_latipinna
ENSCPBG00000020535	XRCC6	99	59.934	ENSPMEG00000018478	xrcc6	99	59.934	Poecilia_mexicana
ENSCPBG00000020535	XRCC6	99	59.641	ENSPREG00000020957	xrcc6	93	59.641	Poecilia_reticulata
ENSCPBG00000020535	XRCC6	99	65.846	ENSPPYG00000011876	XRCC6	99	65.681	Pongo_abelii
ENSCPBG00000020535	XRCC6	99	74.056	ENSPVAG00000001168	XRCC6	99	73.727	Pteropus_vampyrus
ENSCPBG00000020535	XRCC6	99	58.484	ENSPNYG00000003815	xrcc6	99	55.956	Pundamilia_nyererei
ENSCPBG00000020535	XRCC6	99	72.414	ENSRNOG00000006392	Xrcc6	99	72.414	Rattus_norvegicus
ENSCPBG00000020535	XRCC6	99	68.801	ENSRBIG00000039794	XRCC6	99	69.019	Rhinopithecus_bieti
ENSCPBG00000020535	XRCC6	99	74.220	ENSRROG00000030297	XRCC6	99	74.056	Rhinopithecus_roxellana
ENSCPBG00000020535	XRCC6	67	64.373	ENSSBOG00000024724	-	99	64.373	Saimiri_boliviensis_boliviensis
ENSCPBG00000020535	XRCC6	99	72.951	ENSSHAG00000010790	XRCC6	99	72.951	Sarcophilus_harrisii
ENSCPBG00000020535	XRCC6	99	61.827	ENSSFOG00015014409	xrcc6	100	61.990	Scleropages_formosus
ENSCPBG00000020535	XRCC6	99	60.626	ENSSMAG00000006496	xrcc6	99	60.956	Scophthalmus_maximus
ENSCPBG00000020535	XRCC6	99	58.170	ENSSDUG00000007542	xrcc6	99	58.497	Seriola_dumerili
ENSCPBG00000020535	XRCC6	99	57.843	ENSSLDG00000009974	xrcc6	99	58.170	Seriola_lalandi_dorsalis
ENSCPBG00000020535	XRCC6	99	84.729	ENSSPUG00000012086	XRCC6	99	84.729	Sphenodon_punctatus
ENSCPBG00000020535	XRCC6	99	59.442	ENSSPAG00000015199	xrcc6	99	59.770	Stegastes_partitus
ENSCPBG00000020535	XRCC6	96	80.789	ENSTGUG00000009852	-	95	80.789	Taeniopygia_guttata
ENSCPBG00000020535	XRCC6	99	57.825	ENSTRUG00000017070	xrcc6	99	57.825	Takifugu_rubripes
ENSCPBG00000020535	XRCC6	95	58.773	ENSTNIG00000012947	xrcc6	99	58.773	Tetraodon_nigroviridis
ENSCPBG00000020535	XRCC6	95	69.535	ENSTBEG00000011736	XRCC6	99	69.535	Tupaia_belangeri
ENSCPBG00000020535	XRCC6	99	62.459	ENSTTRG00000006749	XRCC6	99	62.459	Tursiops_truncatus
ENSCPBG00000020535	XRCC6	99	59.113	ENSXMAG00000009691	xrcc6	99	59.113	Xiphophorus_maculatus