EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000020570 (Gene tree)
Gene ID: 101951039
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 3957 bases
Position: chrKK088237.1:16742132-16746088
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029171	GTP_EFTU	PF00009.27	4.4e-49	1	1
ENSCPBP00000029171	GTP_EFTU_D2	PF03144.25	2.1e-11	1	1
ENSCPBP00000029171	GTP_EFTU_D3	PF03143.17	2.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000034348	-	1512	-	ENSCPBP00000029171	503 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000020570's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000020570	-	89	69.011	ENSCPBG00000000748	-	99	69.011
ENSCPBG00000020570	-	87	34.899	ENSCPBG00000020430	GSPT1	77	34.899
ENSCPBG00000020570	-	89	70.769	ENSCPBG00000027203	EEF1A2	98	70.769
ENSCPBG00000020570	-	89	67.692	ENSCPBG00000000646	-	99	67.692
ENSCPBG00000020570	-	89	71.429	ENSCPBG00000005222	-	98	71.429
ENSCPBG00000020570	-	87	36.902	ENSCPBG00000017635	HBS1L	62	36.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020570	-	89	73.836	ENSAPOG00000016459	si:dkey-37o8.1	99	73.836	Acanthochromis_polyacanthus
ENSCPBG00000020570	-	85	71.363	ENSACIG00000020985	si:dkey-37o8.1	81	71.363	Amphilophus_citrinellus
ENSCPBG00000020570	-	90	74.123	ENSAOCG00000002663	si:dkey-37o8.1	99	74.123	Amphiprion_ocellaris
ENSCPBG00000020570	-	90	74.123	ENSAPEG00000012670	si:dkey-37o8.1	99	74.123	Amphiprion_percula
ENSCPBG00000020570	-	83	74.163	ENSATEG00000002217	si:dkey-37o8.1	98	74.163	Anabas_testudineus
ENSCPBG00000020570	-	87	75.171	ENSACLG00000003519	si:dkey-37o8.1	96	75.171	Astatotilapia_calliptera
ENSCPBG00000020570	-	90	73.246	ENSAMXG00000002728	si:dkey-37o8.1	99	73.085	Astyanax_mexicanus
ENSCPBG00000020570	-	87	70.203	ENSCSEG00000019807	si:dkey-37o8.1	97	70.721	Cynoglossus_semilaevis
ENSCPBG00000020570	-	89	72.889	ENSCVAG00000009828	si:dkey-37o8.1	99	72.889	Cyprinodon_variegatus
ENSCPBG00000020570	-	89	71.460	ENSDARG00000071727	si:dkey-37o8.1	93	71.460	Danio_rerio
ENSCPBG00000020570	-	90	72.368	ENSELUG00000007495	si:dkey-37o8.1	99	72.210	Esox_lucius
ENSCPBG00000020570	-	89	72.444	ENSFHEG00000017452	si:dkey-37o8.1	98	72.444	Fundulus_heteroclitus
ENSCPBG00000020570	-	89	68.889	ENSGMOG00000006122	si:dkey-37o8.1	99	68.889	Gadus_morhua
ENSCPBG00000020570	-	88	68.090	ENSGAFG00000000367	si:dkey-37o8.1	99	68.090	Gambusia_affinis
ENSCPBG00000020570	-	90	70.395	ENSGACG00000004505	si:dkey-37o8.1	99	70.395	Gasterosteus_aculeatus
ENSCPBG00000020570	-	92	97.629	ENSGAGG00000007724	-	99	97.629	Gopherus_agassizii
ENSCPBG00000020570	-	87	75.399	ENSHBUG00000015515	si:dkey-37o8.1	96	75.399	Haplochromis_burtoni
ENSCPBG00000020570	-	87	69.318	ENSHCOG00000001215	si:dkey-37o8.1	98	69.318	Hippocampus_comes
ENSCPBG00000020570	-	90	73.465	ENSIPUG00000004067	si:dkey-37o8.1	99	73.304	Ictalurus_punctatus
ENSCPBG00000020570	-	87	74.032	ENSKMAG00000015910	si:dkey-37o8.1	96	73.864	Kryptolebias_marmoratus
ENSCPBG00000020570	-	87	74.487	ENSLBEG00000021334	si:dkey-37o8.1	87	74.487	Labrus_bergylta
ENSCPBG00000020570	-	90	77.899	ENSLACG00000003948	si:dkey-37o8.1	99	78.194	Latimeria_chalumnae
ENSCPBG00000020570	-	91	73.638	ENSLOCG00000011245	si:dkey-37o8.1	99	73.904	Lepisosteus_oculatus
ENSCPBG00000020570	-	87	69.932	ENSMAMG00000009907	si:dkey-37o8.1	92	69.932	Mastacembelus_armatus
ENSCPBG00000020570	-	87	75.171	ENSMZEG00005018358	si:dkey-37o8.1	96	75.171	Maylandia_zebra
ENSCPBG00000020570	-	87	73.576	ENSMMOG00000004111	si:dkey-37o8.1	96	73.576	Mola_mola
ENSCPBG00000020570	-	86	71.918	ENSMALG00000017152	si:dkey-37o8.1	99	71.918	Monopterus_albus
ENSCPBG00000020570	-	87	75.171	ENSNBRG00000013552	si:dkey-37o8.1	96	75.171	Neolamprologus_brichardi
ENSCPBG00000020570	-	87	75.171	ENSONIG00000006165	si:dkey-37o8.1	96	75.171	Oreochromis_niloticus
ENSCPBG00000020570	-	87	74.260	ENSORLG00000019066	si:dkey-37o8.1	98	73.154	Oryzias_latipes
ENSCPBG00000020570	-	87	74.260	ENSORLG00020008094	si:dkey-37o8.1	98	73.154	Oryzias_latipes_hni
ENSCPBG00000020570	-	87	74.487	ENSORLG00015008410	si:dkey-37o8.1	98	73.378	Oryzias_latipes_hsok
ENSCPBG00000020570	-	88	73.826	ENSOMEG00000001868	si:dkey-37o8.1	98	73.826	Oryzias_melastigma
ENSCPBG00000020570	-	87	74.208	ENSPKIG00000017246	si:dkey-37o8.1	96	74.318	Paramormyrops_kingsleyae
ENSCPBG00000020570	-	55	91.166	ENSPSIG00000008080	-	99	91.166	Pelodiscus_sinensis
ENSCPBG00000020570	-	89	72.000	ENSPFOG00000013173	si:dkey-37o8.1	98	72.000	Poecilia_formosa
ENSCPBG00000020570	-	88	71.171	ENSPLAG00000010405	si:dkey-37o8.1	99	70.897	Poecilia_latipinna
ENSCPBG00000020570	-	89	72.222	ENSPMEG00000015233	si:dkey-37o8.1	98	72.222	Poecilia_mexicana
ENSCPBG00000020570	-	89	71.111	ENSPREG00000006280	si:dkey-37o8.1	99	71.111	Poecilia_reticulata
ENSCPBG00000020570	-	87	75.171	ENSPNYG00000002059	si:dkey-37o8.1	96	75.171	Pundamilia_nyererei
ENSCPBG00000020570	-	90	73.684	ENSPNAG00000009990	si:dkey-37o8.1	99	73.523	Pygocentrus_nattereri
ENSCPBG00000020570	-	87	75.847	ENSSFOG00015019070	si:dkey-37o8.1	96	76.310	Scleropages_formosus
ENSCPBG00000020570	-	87	74.487	ENSSMAG00000016143	si:dkey-37o8.1	96	74.487	Scophthalmus_maximus
ENSCPBG00000020570	-	87	74.487	ENSSDUG00000009163	si:dkey-37o8.1	96	74.487	Seriola_dumerili
ENSCPBG00000020570	-	87	74.715	ENSSLDG00000023761	si:dkey-37o8.1	96	74.715	Seriola_lalandi_dorsalis
ENSCPBG00000020570	-	92	84.188	ENSSPUG00000007467	-	99	85.307	Sphenodon_punctatus
ENSCPBG00000020570	-	87	75.626	ENSSPAG00000013856	si:dkey-37o8.1	99	74.123	Stegastes_partitus
ENSCPBG00000020570	-	87	74.603	ENSTRUG00000009006	si:dkey-37o8.1	98	74.603	Takifugu_rubripes
ENSCPBG00000020570	-	87	73.469	ENSTNIG00000017138	si:dkey-37o8.1	95	73.469	Tetraodon_nigroviridis
ENSCPBG00000020570	-	90	77.681	ENSXETG00000017744	42Sp50	99	77.681	Xenopus_tropicalis
ENSCPBG00000020570	-	89	71.556	ENSXCOG00000012296	si:dkey-37o8.1	99	71.397	Xiphophorus_couchianus
ENSCPBG00000020570	-	89	72.000	ENSXMAG00000001998	si:dkey-37o8.1	99	71.840	Xiphophorus_maculatus