EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000020866 (Gene tree)
Gene ID: 101937904
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5928 bases
Position: chrKK088234.1:8941282-8947209
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029606	PPR	PF01535.20	1e-14	1	2
ENSCPBP00000029606	PPR	PF01535.20	1e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000034845	-	2720	-	ENSCPBP00000029606	740 (aa)	XP_005289112	UPI000388A908

Gene Model

Click here to download ENSCPBG00000020866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020866	-	97	54.184	ENSG00000106246	PTCD1	97	54.047	Homo_sapiens
ENSCPBG00000020866	-	97	54.184	ENSG00000248919	ATP5MF-PTCD1	90	54.047	Homo_sapiens
ENSCPBG00000020866	-	81	45.813	ENSAPOG00000010679	ptcd1	88	45.499	Acanthochromis_polyacanthus
ENSCPBG00000020866	-	97	57.044	ENSAMEG00000006224	-	90	57.182	Ailuropoda_melanoleuca
ENSCPBG00000020866	-	93	44.718	ENSACIG00000017861	ptcd1	93	44.718	Amphilophus_citrinellus
ENSCPBG00000020866	-	85	46.384	ENSAOCG00000020741	-	84	46.384	Amphiprion_ocellaris
ENSCPBG00000020866	-	78	46.416	ENSAOCG00000022617	ptcd1	81	46.416	Amphiprion_ocellaris
ENSCPBG00000020866	-	85	46.226	ENSAPEG00000022632	ptcd1	84	46.226	Amphiprion_percula
ENSCPBG00000020866	-	87	47.239	ENSATEG00000007016	ptcd1	86	47.699	Anabas_testudineus
ENSCPBG00000020866	-	85	69.889	ENSAPLG00000006862	-	97	68.896	Anas_platyrhynchos
ENSCPBG00000020866	-	91	62.963	ENSACAG00000012871	-	86	62.963	Anolis_carolinensis
ENSCPBG00000020866	-	97	53.752	ENSANAG00000035790	-	99	54.076	Aotus_nancymaae
ENSCPBG00000020866	-	84	47.368	ENSACLG00000002824	ptcd1	82	47.209	Astatotilapia_calliptera
ENSCPBG00000020866	-	89	49.926	ENSAMXG00000037292	ptcd1	92	50.517	Astyanax_mexicanus
ENSCPBG00000020866	-	97	54.905	ENSBTAG00000020440	-	84	54.905	Bos_taurus
ENSCPBG00000020866	-	97	55.357	ENSCJAG00000015815	-	97	55.082	Callithrix_jacchus
ENSCPBG00000020866	-	97	57.655	ENSCAFG00000015055	-	90	57.280	Canis_familiaris
ENSCPBG00000020866	-	97	57.397	ENSCAFG00020014480	-	90	57.260	Canis_lupus_dingo
ENSCPBG00000020866	-	86	59.472	ENSCHIG00000027000	-	87	59.317	Capra_hircus
ENSCPBG00000020866	-	83	62.219	ENSTSYG00000029495	-	87	60.526	Carlito_syrichta
ENSCPBG00000020866	-	85	59.400	ENSCAPG00000014660	-	95	57.511	Cavia_aperea
ENSCPBG00000020866	-	85	60.348	ENSCPOG00000001780	-	89	58.422	Cavia_porcellus
ENSCPBG00000020866	-	97	53.794	ENSCCAG00000034025	-	97	54.348	Cebus_capucinus
ENSCPBG00000020866	-	97	54.309	ENSCATG00000040859	-	97	54.434	Cercocebus_atys
ENSCPBG00000020866	-	84	61.208	ENSCLAG00000006354	-	89	59.819	Chinchilla_lanigera
ENSCPBG00000020866	-	92	52.525	ENSCSAG00000017794	-	95	53.634	Chlorocebus_sabaeus
ENSCPBG00000020866	-	66	37.079	ENSCING00000007717	-	75	42.056	Ciona_intestinalis
ENSCPBG00000020866	-	97	53.752	ENSCANG00000023441	-	97	54.025	Colobus_angolensis_palliatus
ENSCPBG00000020866	-	87	58.308	ENSCGRG00001023686	Ptcd1	88	58.642	Cricetulus_griseus_chok1gshd
ENSCPBG00000020866	-	87	58.308	ENSCGRG00000015031	Ptcd1	87	58.642	Cricetulus_griseus_crigri
ENSCPBG00000020866	-	83	45.338	ENSCSEG00000002378	ptcd1	81	45.820	Cynoglossus_semilaevis
ENSCPBG00000020866	-	82	48.191	ENSCVAG00000003621	ptcd1	87	46.753	Cyprinodon_variegatus
ENSCPBG00000020866	-	85	47.031	ENSCVAG00000015826	ptcd1	86	46.417	Cyprinodon_variegatus
ENSCPBG00000020866	-	92	47.902	ENSDARG00000076176	ptcd1	94	47.612	Danio_rerio
ENSCPBG00000020866	-	86	58.540	ENSDNOG00000009957	-	98	54.398	Dasypus_novemcinctus
ENSCPBG00000020866	-	99	55.556	ENSDORG00000000740	Ptcd1	99	56.233	Dipodomys_ordii
ENSCPBG00000020866	-	83	40.124	ENSEBUG00000014515	ptcd1	96	41.146	Eptatretus_burgeri
ENSCPBG00000020866	-	85	62.303	ENSEASG00005002480	-	98	57.047	Equus_asinus_asinus
ENSCPBG00000020866	-	85	62.461	ENSECAG00000016617	-	88	61.702	Equus_caballus
ENSCPBG00000020866	-	84	46.688	ENSELUG00000016517	ptcd1	83	46.688	Esox_lucius
ENSCPBG00000020866	-	97	57.280	ENSFCAG00000015069	-	97	57.692	Felis_catus
ENSCPBG00000020866	-	92	67.401	ENSFALG00000013803	-	93	67.695	Ficedula_albicollis
ENSCPBG00000020866	-	85	58.583	ENSFDAG00000006393	-	89	57.424	Fukomys_damarensis
ENSCPBG00000020866	-	77	45.833	ENSFHEG00000012491	ptcd1	93	45.833	Fundulus_heteroclitus
ENSCPBG00000020866	-	81	45.738	ENSGMOG00000007639	ptcd1	91	45.738	Gadus_morhua
ENSCPBG00000020866	-	86	70.376	ENSGALG00000004711	-	89	70.170	Gallus_gallus
ENSCPBG00000020866	-	89	44.231	ENSGAFG00000013175	ptcd1	91	44.131	Gambusia_affinis
ENSCPBG00000020866	-	82	48.445	ENSGACG00000016607	ptcd1	94	46.646	Gasterosteus_aculeatus
ENSCPBG00000020866	-	93	90.262	ENSGAGG00000021832	-	100	90.552	Gopherus_agassizii
ENSCPBG00000020866	-	97	54.184	ENSGGOG00000015123	-	97	54.047	Gorilla_gorilla
ENSCPBG00000020866	-	84	47.528	ENSHBUG00000018275	ptcd1	82	47.368	Haplochromis_burtoni
ENSCPBG00000020866	-	85	61.526	ENSHGLG00000017621	-	89	60.550	Heterocephalus_glaber_female
ENSCPBG00000020866	-	85	61.526	ENSHGLG00100007218	-	89	60.550	Heterocephalus_glaber_male
ENSCPBG00000020866	-	84	42.013	ENSHCOG00000010784	ptcd1	84	44.249	Hippocampus_comes
ENSCPBG00000020866	-	89	57.895	ENSSTOG00000001682	-	88	57.895	Ictidomys_tridecemlineatus
ENSCPBG00000020866	-	85	61.208	ENSJJAG00000000319	Ptcd1	88	61.208	Jaculus_jaculus
ENSCPBG00000020866	-	86	45.988	ENSKMAG00000008708	ptcd1	85	46.059	Kryptolebias_marmoratus
ENSCPBG00000020866	-	89	46.526	ENSLBEG00000008061	ptcd1	86	47.297	Labrus_bergylta
ENSCPBG00000020866	-	93	59.045	ENSLACG00000011172	ptcd1	93	59.045	Latimeria_chalumnae
ENSCPBG00000020866	-	84	58.544	ENSLOCG00000004833	ptcd1	94	55.751	Lepisosteus_oculatus
ENSCPBG00000020866	-	84	61.244	ENSLAFG00000002588	-	86	61.244	Loxodonta_africana
ENSCPBG00000020866	-	97	54.434	ENSMFAG00000041324	-	97	54.570	Macaca_fascicularis
ENSCPBG00000020866	-	97	54.595	ENSMMUG00000030408	-	97	54.707	Macaca_mulatta
ENSCPBG00000020866	-	97	54.570	ENSMNEG00000043786	-	97	54.707	Macaca_nemestrina
ENSCPBG00000020866	-	97	41.313	ENSMLEG00000031179	-	96	43.247	Mandrillus_leucophaeus
ENSCPBG00000020866	-	94	46.067	ENSMAMG00000007623	ptcd1	92	45.670	Mastacembelus_armatus
ENSCPBG00000020866	-	84	47.528	ENSMZEG00005012722	ptcd1	82	47.368	Maylandia_zebra
ENSCPBG00000020866	-	86	69.811	ENSMGAG00000004211	-	81	69.937	Meleagris_gallopavo
ENSCPBG00000020866	-	99	53.633	ENSMICG00000017428	-	99	54.090	Microcebus_murinus
ENSCPBG00000020866	-	86	45.609	ENSMMOG00000020243	ptcd1	88	46.916	Mola_mola
ENSCPBG00000020866	-	100	57.353	ENSMODG00000001350	-	99	57.353	Monodelphis_domestica
ENSCPBG00000020866	-	90	46.786	ENSMALG00000018442	ptcd1	86	46.786	Monopterus_albus
ENSCPBG00000020866	-	91	55.718	MGP_CAROLIEiJ_G0028011	Ptcd1	93	55.865	Mus_caroli
ENSCPBG00000020866	-	85	59.019	ENSMUSG00000029624	Ptcd1	86	59.019	Mus_musculus
ENSCPBG00000020866	-	91	56.459	MGP_PahariEiJ_G0024580	Ptcd1	93	56.459	Mus_pahari
ENSCPBG00000020866	-	85	57.812	MGP_SPRETEiJ_G0029012	Ptcd1	86	59.335	Mus_spretus
ENSCPBG00000020866	-	86	60.903	ENSMPUG00000016518	-	87	61.085	Mustela_putorius_furo
ENSCPBG00000020866	-	85	60.669	ENSMLUG00000010994	-	92	56.038	Myotis_lucifugus
ENSCPBG00000020866	-	83	47.419	ENSNBRG00000010079	ptcd1	84	47.419	Neolamprologus_brichardi
ENSCPBG00000020866	-	77	57.692	ENSNLEG00000011060	-	92	57.692	Nomascus_leucogenys
ENSCPBG00000020866	-	99	55.978	ENSMEUG00000006930	-	99	55.978	Notamacropus_eugenii
ENSCPBG00000020866	-	78	61.364	ENSOPRG00000013647	-	79	61.364	Ochotona_princeps
ENSCPBG00000020866	-	84	45.367	ENSONIG00000003168	ptcd1	97	45.367	Oreochromis_niloticus
ENSCPBG00000020866	-	88	53.467	ENSOANG00000007728	-	84	52.129	Ornithorhynchus_anatinus
ENSCPBG00000020866	-	85	58.852	ENSOCUG00000010584	-	87	58.025	Oryctolagus_cuniculus
ENSCPBG00000020866	-	86	47.402	ENSORLG00000009275	ptcd1	86	47.402	Oryzias_latipes
ENSCPBG00000020866	-	95	45.312	ENSORLG00020000988	ptcd1	93	45.312	Oryzias_latipes_hni
ENSCPBG00000020866	-	86	46.929	ENSORLG00015010557	ptcd1	86	46.929	Oryzias_latipes_hsok
ENSCPBG00000020866	-	82	47.438	ENSOMEG00000020627	ptcd1	88	46.264	Oryzias_melastigma
ENSCPBG00000020866	-	83	59.935	ENSOGAG00000010877	-	92	57.675	Otolemur_garnettii
ENSCPBG00000020866	-	86	55.368	ENSOARG00000018676	-	87	55.368	Ovis_aries
ENSCPBG00000020866	-	97	55.096	ENSPPAG00000036024	-	97	54.959	Pan_paniscus
ENSCPBG00000020866	-	97	57.692	ENSPPRG00000003478	-	97	57.692	Panthera_pardus
ENSCPBG00000020866	-	97	55.234	ENSPTRG00000019452	-	97	55.096	Pan_troglodytes
ENSCPBG00000020866	-	97	54.583	ENSPANG00000016730	-	97	54.843	Papio_anubis
ENSCPBG00000020866	-	84	52.895	ENSPKIG00000014215	ptcd1	87	53.427	Paramormyrops_kingsleyae
ENSCPBG00000020866	-	83	81.818	ENSPSIG00000011184	-	100	81.818	Pelodiscus_sinensis
ENSCPBG00000020866	-	72	40.402	ENSPMAG00000009667	ptcd1	100	40.402	Petromyzon_marinus
ENSCPBG00000020866	-	99	56.604	ENSPCIG00000024778	-	98	56.739	Phascolarctos_cinereus
ENSCPBG00000020866	-	85	45.197	ENSPFOG00000004458	ptcd1	83	45.354	Poecilia_formosa
ENSCPBG00000020866	-	85	45.055	ENSPLAG00000011051	ptcd1	85	45.212	Poecilia_latipinna
ENSCPBG00000020866	-	85	45.984	ENSPMEG00000020547	ptcd1	83	45.984	Poecilia_mexicana
ENSCPBG00000020866	-	90	44.478	ENSPREG00000000059	ptcd1	90	44.148	Poecilia_reticulata
ENSCPBG00000020866	-	89	56.502	ENSPPYG00000017377	-	96	56.502	Pongo_abelii
ENSCPBG00000020866	-	77	60.606	ENSPCAG00000001852	-	84	60.606	Procavia_capensis
ENSCPBG00000020866	-	97	55.007	ENSPCOG00000018596	-	97	55.556	Propithecus_coquereli
ENSCPBG00000020866	-	63	72.000	ENSPVAG00000007529	-	69	72.000	Pteropus_vampyrus
ENSCPBG00000020866	-	89	45.701	ENSPNYG00000019993	ptcd1	86	45.551	Pundamilia_nyererei
ENSCPBG00000020866	-	88	51.372	ENSPNAG00000014931	ptcd1	91	51.524	Pygocentrus_nattereri
ENSCPBG00000020866	-	83	60.841	ENSRNOG00000000987	Ptcd1	88	59.688	Rattus_norvegicus
ENSCPBG00000020866	-	97	54.384	ENSRBIG00000043393	-	97	54.658	Rhinopithecus_bieti
ENSCPBG00000020866	-	97	54.533	ENSRROG00000036420	-	97	54.808	Rhinopithecus_roxellana
ENSCPBG00000020866	-	97	55.158	ENSSBOG00000024114	-	97	55.342	Saimiri_boliviensis_boliviensis
ENSCPBG00000020866	-	100	55.422	ENSSHAG00000011376	-	99	57.372	Sarcophilus_harrisii
ENSCPBG00000020866	-	89	53.869	ENSSFOG00015007909	ptcd1	83	55.763	Scleropages_formosus
ENSCPBG00000020866	-	86	45.271	ENSSMAG00000000218	ptcd1	95	45.666	Scophthalmus_maximus
ENSCPBG00000020866	-	90	46.041	ENSSDUG00000015671	ptcd1	91	45.894	Seriola_dumerili
ENSCPBG00000020866	-	86	47.752	ENSSLDG00000014261	ptcd1	85	47.752	Seriola_lalandi_dorsalis
ENSCPBG00000020866	-	99	68.237	ENSSPUG00000003540	-	99	68.506	Sphenodon_punctatus
ENSCPBG00000020866	-	84	46.741	ENSSPAG00000011049	ptcd1	82	47.368	Stegastes_partitus
ENSCPBG00000020866	-	83	60.806	ENSSSCG00000007622	-	93	59.414	Sus_scrofa
ENSCPBG00000020866	-	86	68.388	ENSTGUG00000007563	-	99	69.014	Taeniopygia_guttata
ENSCPBG00000020866	-	85	46.334	ENSTRUG00000013471	ptcd1	83	46.000	Takifugu_rubripes
ENSCPBG00000020866	-	85	46.071	ENSTNIG00000008271	ptcd1	87	46.071	Tetraodon_nigroviridis
ENSCPBG00000020866	-	91	57.290	ENSTBEG00000011021	-	93	56.996	Tupaia_belangeri
ENSCPBG00000020866	-	94	55.571	ENSTTRG00000003006	-	97	55.289	Tursiops_truncatus
ENSCPBG00000020866	-	97	56.259	ENSUAMG00000008049	-	97	56.534	Ursus_americanus
ENSCPBG00000020866	-	97	58.230	ENSVVUG00000008836	-	97	58.091	Vulpes_vulpes
ENSCPBG00000020866	-	97	52.083	ENSXETG00000009891	ptcd1	87	56.916	Xenopus_tropicalis
ENSCPBG00000020866	-	82	47.291	ENSXMAG00000015540	ptcd1	81	47.204	Xiphophorus_maculatus