EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000020893 (Gene tree)
Gene ID: 101946900
Gene Symbol: PARP4
Alias: ADPRTL1|VAULT3|VPARP|VWA5C|p193
Full Name: poly(ADP-ribose) polymerase family member 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 105642 bases
Position: chr1:76152451-76258092
Accession: 271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029675	PARP	PF00644.20	1.9e-34	1	1
ENSCPBP00000029670	PARP	PF00644.20	2e-34	1	1
ENSCPBP00000029679	PARP	PF00644.20	2e-34	1	1
ENSCPBP00000029683	PARP	PF00644.20	2.1e-34	1	1
ENSCPBP00000029662	PARP	PF00644.20	2.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000034908	PARP4-201	6350	-	ENSCPBP00000029662	1860 (aa)	-	-
ENSCPBT00000034921	PARP4-203	6002	-	ENSCPBP00000029675	1744 (aa)	-	-
ENSCPBT00000034916	PARP4-202	6161	-	ENSCPBP00000029670	1797 (aa)	-	-
ENSCPBT00000034929	PARP4-205	5623	-	ENSCPBP00000029683	1724 (aa)	-	-
ENSCPBT00000034925	PARP4-204	6124	-	ENSCPBP00000029679	1803 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000020893's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03410	Base excision repair	KEGG
cpic04210	Apoptosis	KEGG
cpic04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020893	PARP4	94	65.101	ENSG00000102699	PARP4	79	61.644	Homo_sapiens
ENSCPBG00000020893	PARP4	71	46.092	ENSAPOG00000020678	parp4	93	46.635	Acanthochromis_polyacanthus
ENSCPBG00000020893	PARP4	80	60.193	ENSAMEG00000017377	PARP4	100	61.080	Ailuropoda_melanoleuca
ENSCPBG00000020893	PARP4	73	49.077	ENSACIG00000021890	parp4	99	48.553	Amphilophus_citrinellus
ENSCPBG00000020893	PARP4	79	47.101	ENSAPEG00000014531	parp4	64	47.101	Amphiprion_percula
ENSCPBG00000020893	PARP4	71	48.068	ENSATEG00000023758	parp4	81	48.042	Anabas_testudineus
ENSCPBG00000020893	PARP4	73	69.025	ENSAPLG00000005053	PARP4	100	73.162	Anas_platyrhynchos
ENSCPBG00000020893	PARP4	79	64.493	ENSACAG00000001725	PARP4	77	60.161	Anolis_carolinensis
ENSCPBG00000020893	PARP4	93	65.593	ENSANAG00000021254	PARP4	76	72.881	Aotus_nancymaae
ENSCPBG00000020893	PARP4	79	46.855	ENSACLG00000009783	parp4	73	47.177	Astatotilapia_calliptera
ENSCPBG00000020893	PARP4	81	48.430	ENSAMXG00000016657	parp4	79	48.430	Astyanax_mexicanus
ENSCPBG00000020893	PARP4	79	61.013	ENSBTAG00000025400	PARP4	74	61.576	Bos_taurus
ENSCPBG00000020893	PARP4	94	65.685	ENSCJAG00000004452	PARP4	79	62.238	Callithrix_jacchus
ENSCPBG00000020893	PARP4	80	60.628	ENSCAFG00000007375	PARP4	90	61.160	Canis_familiaris
ENSCPBG00000020893	PARP4	80	60.032	ENSCAFG00020002104	PARP4	98	64.228	Canis_lupus_dingo
ENSCPBG00000020893	PARP4	79	61.402	ENSCHIG00000016066	PARP4	78	61.866	Capra_hircus
ENSCPBG00000020893	PARP4	90	60.677	ENSTSYG00000014701	PARP4	84	60.737	Carlito_syrichta
ENSCPBG00000020893	PARP4	79	58.842	ENSCPOG00000014672	PARP4	80	59.149	Cavia_porcellus
ENSCPBG00000020893	PARP4	90	61.384	ENSCCAG00000032863	PARP4	76	72.881	Cebus_capucinus
ENSCPBG00000020893	PARP4	94	62.431	ENSCATG00000035770	PARP4	79	64.626	Cercocebus_atys
ENSCPBG00000020893	PARP4	93	65.285	ENSCSAG00000018004	PARP4	79	65.068	Chlorocebus_sabaeus
ENSCPBG00000020893	PARP4	54	64.220	ENSCHOG00000006882	-	75	65.367	Choloepus_hoffmanni
ENSCPBG00000020893	PARP4	79	65.217	ENSCANG00000014573	PARP4	79	65.217	Colobus_angolensis_palliatus
ENSCPBG00000020893	PARP4	79	60.355	ENSCGRG00001021886	Parp4	78	60.757	Cricetulus_griseus_chok1gshd
ENSCPBG00000020893	PARP4	79	60.355	ENSCGRG00000011944	Parp4	77	60.757	Cricetulus_griseus_crigri
ENSCPBG00000020893	PARP4	79	45.673	ENSCSEG00000004631	parp4	83	45.976	Cynoglossus_semilaevis
ENSCPBG00000020893	PARP4	75	48.934	ENSCVAG00000010227	parp4	99	49.794	Cyprinodon_variegatus
ENSCPBG00000020893	PARP4	80	47.669	ENSDARG00000069934	parp4	77	47.994	Danio_rerio
ENSCPBG00000020893	PARP4	80	61.402	ENSDNOG00000037733	PARP4	69	61.886	Dasypus_novemcinctus
ENSCPBG00000020893	PARP4	80	59.388	ENSDORG00000029090	Parp4	99	59.871	Dipodomys_ordii
ENSCPBG00000020893	PARP4	80	61.160	ENSEASG00005000229	PARP4	95	64.074	Equus_asinus_asinus
ENSCPBG00000020893	PARP4	80	61.223	ENSECAG00000009458	PARP4	80	61.706	Equus_caballus
ENSCPBG00000020893	PARP4	79	48.642	ENSELUG00000005711	parp4	77	48.281	Esox_lucius
ENSCPBG00000020893	PARP4	80	62.077	ENSFCAG00000031561	PARP4	77	72.500	Felis_catus
ENSCPBG00000020893	PARP4	79	60.032	ENSFDAG00000010439	PARP4	79	60.516	Fukomys_damarensis
ENSCPBG00000020893	PARP4	72	47.151	ENSFHEG00000021894	parp4	95	48.032	Fundulus_heteroclitus
ENSCPBG00000020893	PARP4	66	58.052	ENSGMOG00000001674	parp4	72	58.052	Gadus_morhua
ENSCPBG00000020893	PARP4	90	70.335	ENSGALG00000034473	PARP4	90	70.574	Gallus_gallus
ENSCPBG00000020893	PARP4	79	46.656	ENSGACG00000008521	parp4	80	46.345	Gasterosteus_aculeatus
ENSCPBG00000020893	PARP4	80	93.059	ENSGAGG00000006063	PARP4	97	93.059	Gopherus_agassizii
ENSCPBG00000020893	PARP4	92	56.084	ENSGGOG00000002940	PARP4	76	60.435	Gorilla_gorilla
ENSCPBG00000020893	PARP4	62	53.070	ENSHBUG00000018539	parp4	99	53.074	Haplochromis_burtoni
ENSCPBG00000020893	PARP4	79	59.629	ENSHGLG00000008309	PARP4	78	60.113	Heterocephalus_glaber_female
ENSCPBG00000020893	PARP4	79	59.629	ENSHGLG00100012331	PARP4	78	60.113	Heterocephalus_glaber_male
ENSCPBG00000020893	PARP4	79	48.551	ENSHCOG00000017842	parp4	77	49.265	Hippocampus_comes
ENSCPBG00000020893	PARP4	80	47.381	ENSIPUG00000003181	parp4	77	47.381	Ictalurus_punctatus
ENSCPBG00000020893	PARP4	64	66.947	ENSSTOG00000027869	PARP4	77	66.947	Ictidomys_tridecemlineatus
ENSCPBG00000020893	PARP4	59	49.509	ENSKMAG00000018334	parp4	96	49.509	Kryptolebias_marmoratus
ENSCPBG00000020893	PARP4	79	47.760	ENSLBEG00000013362	parp4	71	48.080	Labrus_bergylta
ENSCPBG00000020893	PARP4	79	62.759	ENSLACG00000005075	-	79	62.759	Latimeria_chalumnae
ENSCPBG00000020893	PARP4	80	50.159	ENSLOCG00000010789	parp4	81	50.354	Lepisosteus_oculatus
ENSCPBG00000020893	PARP4	71	61.089	ENSLAFG00000002022	-	99	64.635	Loxodonta_africana
ENSCPBG00000020893	PARP4	94	65.378	ENSMMUG00000012297	PARP4	79	65.068	Macaca_mulatta
ENSCPBG00000020893	PARP4	92	62.619	ENSMNEG00000044999	PARP4	76	65.068	Macaca_nemestrina
ENSCPBG00000020893	PARP4	94	65.562	ENSMLEG00000041053	PARP4	79	64.384	Mandrillus_leucophaeus
ENSCPBG00000020893	PARP4	66	48.088	ENSMAMG00000020871	parp4	93	48.470	Mastacembelus_armatus
ENSCPBG00000020893	PARP4	77	47.059	ENSMZEG00005014412	parp4	73	47.381	Maylandia_zebra
ENSCPBG00000020893	PARP4	80	70.214	ENSMGAG00000015136	PARP4	87	70.556	Meleagris_gallopavo
ENSCPBG00000020893	PARP4	71	61.355	ENSMICG00000028028	PARP4	81	62.072	Microcebus_murinus
ENSCPBG00000020893	PARP4	79	60.193	ENSMOCG00000016582	Parp4	76	60.323	Microtus_ochrogaster
ENSCPBG00000020893	PARP4	71	41.091	ENSMMOG00000019397	parp4	96	42.055	Mola_mola
ENSCPBG00000020893	PARP4	79	66.207	ENSMODG00000007894	PARP4	73	65.986	Monodelphis_domestica
ENSCPBG00000020893	PARP4	61	46.289	ENSMALG00000004027	parp4	99	46.197	Monopterus_albus
ENSCPBG00000020893	PARP4	79	58.106	MGP_CAROLIEiJ_G0019339	-	70	58.571	Mus_caroli
ENSCPBG00000020893	PARP4	79	58.421	ENSMUSG00000054509	Parp4	68	58.904	Mus_musculus
ENSCPBG00000020893	PARP4	79	58.757	MGP_PahariEiJ_G0030357	Parp4	70	59.161	Mus_pahari
ENSCPBG00000020893	PARP4	79	58.192	MGP_SPRETEiJ_G0020230	Parp4	69	58.838	Mus_spretus
ENSCPBG00000020893	PARP4	77	65.439	ENSMPUG00000013318	PARP4	83	65.439	Mustela_putorius_furo
ENSCPBG00000020893	PARP4	94	65.257	ENSMLUG00000003797	PARP4	79	62.369	Myotis_lucifugus
ENSCPBG00000020893	PARP4	88	61.765	ENSNGAG00000018396	Parp4	77	61.314	Nannospalax_galili
ENSCPBG00000020893	PARP4	55	81.356	ENSMEUG00000015644	-	82	81.356	Notamacropus_eugenii
ENSCPBG00000020893	PARP4	81	46.456	ENSONIG00000010261	parp4	80	46.456	Oreochromis_niloticus
ENSCPBG00000020893	PARP4	79	61.637	ENSOCUG00000014529	PARP4	75	62.199	Oryctolagus_cuniculus
ENSCPBG00000020893	PARP4	56	50.256	ENSORLG00000018162	parp4	87	50.051	Oryzias_latipes
ENSCPBG00000020893	PARP4	56	51.643	ENSORLG00020011392	parp4	88	51.643	Oryzias_latipes_hni
ENSCPBG00000020893	PARP4	71	46.000	ENSORLG00015007534	parp4	95	46.363	Oryzias_latipes_hsok
ENSCPBG00000020893	PARP4	74	51.224	ENSOMEG00000012305	parp4	86	51.633	Oryzias_melastigma
ENSCPBG00000020893	PARP4	81	62.094	ENSOGAG00000016230	PARP4	82	62.302	Otolemur_garnettii
ENSCPBG00000020893	PARP4	79	61.241	ENSOARG00000014415	PARP4	85	61.805	Ovis_aries
ENSCPBG00000020893	PARP4	94	65.101	ENSPPAG00000024134	PARP4	79	61.644	Pan_paniscus
ENSCPBG00000020893	PARP4	80	61.997	ENSPPRG00000009047	PARP4	77	72.500	Panthera_pardus
ENSCPBG00000020893	PARP4	94	65.654	ENSPTRG00000005711	PARP4	79	61.966	Pan_troglodytes
ENSCPBG00000020893	PARP4	94	65.654	ENSPANG00000006504	PARP4	79	64.626	Papio_anubis
ENSCPBG00000020893	PARP4	80	91.912	ENSPSIG00000014196	PARP4	89	91.912	Pelodiscus_sinensis
ENSCPBG00000020893	PARP4	60	58.333	ENSPMGG00000007212	parp4	92	48.332	Periophthalmus_magnuspinnatus
ENSCPBG00000020893	PARP4	79	60.355	ENSPEMG00000012639	Parp4	73	60.677	Peromyscus_maniculatus_bairdii
ENSCPBG00000020893	PARP4	56	41.667	ENSPMAG00000008938	-	99	41.624	Petromyzon_marinus
ENSCPBG00000020893	PARP4	75	69.608	ENSPCIG00000017800	-	99	69.608	Phascolarctos_cinereus
ENSCPBG00000020893	PARP4	78	47.407	ENSPFOG00000002081	parp4	99	46.645	Poecilia_formosa
ENSCPBG00000020893	PARP4	61	49.384	ENSPLAG00000019059	parp4	92	49.795	Poecilia_latipinna
ENSCPBG00000020893	PARP4	64	51.837	ENSPLAG00000021665	parp4	87	51.837	Poecilia_latipinna
ENSCPBG00000020893	PARP4	60	49.485	ENSPMEG00000016931	-	91	49.897	Poecilia_mexicana
ENSCPBG00000020893	PARP4	56	50.761	ENSPMEG00000017006	parp4	88	49.133	Poecilia_mexicana
ENSCPBG00000020893	PARP4	79	62.162	ENSPCOG00000022852	PARP4	93	62.162	Propithecus_coquereli
ENSCPBG00000020893	PARP4	77	61.842	ENSPVAG00000016461	PARP4	80	61.842	Pteropus_vampyrus
ENSCPBG00000020893	PARP4	76	47.177	ENSPNYG00000015691	parp4	69	47.500	Pundamilia_nyererei
ENSCPBG00000020893	PARP4	56	52.778	ENSPNAG00000019054	parp4	64	52.778	Pygocentrus_nattereri
ENSCPBG00000020893	PARP4	99	51.955	ENSRBIG00000040334	PARP4	79	64.865	Rhinopithecus_bieti
ENSCPBG00000020893	PARP4	99	51.285	ENSRROG00000040417	PARP4	78	64.865	Rhinopithecus_roxellana
ENSCPBG00000020893	PARP4	65	51.207	ENSSDUG00000014635	parp4	88	51.207	Seriola_dumerili
ENSCPBG00000020893	PARP4	80	47.600	ENSSLDG00000022915	parp4	80	47.920	Seriola_lalandi_dorsalis
ENSCPBG00000020893	PARP4	66	48.137	ENSSPAG00000010424	parp4	89	48.000	Stegastes_partitus
ENSCPBG00000020893	PARP4	80	59.694	ENSSSCG00000022957	PARP4	84	58.206	Sus_scrofa
ENSCPBG00000020893	PARP4	79	46.575	ENSTNIG00000015654	parp4	99	45.800	Tetraodon_nigroviridis
ENSCPBG00000020893	PARP4	61	58.724	ENSUAMG00000027134	-	94	58.065	Ursus_americanus
ENSCPBG00000020893	PARP4	81	60.660	ENSUMAG00000013978	PARP4	81	61.223	Ursus_maritimus
ENSCPBG00000020893	PARP4	80	60.838	ENSVVUG00000006363	PARP4	80	66.667	Vulpes_vulpes
ENSCPBG00000020893	PARP4	71	52.006	ENSXETG00000002639	-	97	51.626	Xenopus_tropicalis