EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000020897 (Gene tree)
Gene ID: 101941775
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5107 bases
Position: chrKK082937.1:7300143-7305249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029665	Ribosomal_S27	PF01599.19	6e-28	1	1
ENSCPBP00000029668	Ribosomal_S27	PF01599.19	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000034911	-	541	XM_005299034	ENSCPBP00000029665	156 (aa)	XP_005299091	UPI00001713D2
ENSCPBT00000034914	-	561	-	ENSCPBP00000029668	173 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000020897's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020897	-	63	60.396	ENSAMEG00000004505	-	96	59.406	Ailuropoda_melanoleuca
ENSCPBG00000020897	-	100	99.359	ENSBTAG00000015473	RPS27A	100	99.359	Bos_taurus
ENSCPBG00000020897	-	78	99.174	ENSCAPG00000014837	-	100	99.174	Cavia_aperea
ENSCPBG00000020897	-	94	89.041	ENSCATG00000040456	-	99	89.041	Cercocebus_atys
ENSCPBG00000020897	-	60	98.925	ENSCANG00000033266	-	100	98.925	Colobus_angolensis_palliatus
ENSCPBG00000020897	-	94	89.796	ENSMFAG00000004349	-	99	89.796	Macaca_fascicularis
ENSCPBG00000020897	-	100	84.615	ENSMMUG00000004807	-	100	84.615	Macaca_mulatta
ENSCPBG00000020897	-	87	85.294	ENSMOCG00000012967	-	85	85.294	Microtus_ochrogaster
ENSCPBG00000020897	-	93	91.034	ENSRNOG00000032132	AABR07037998.1	94	91.034	Rattus_norvegicus
ENSCPBG00000020897	-	96	68.000	ENSSARG00000004533	-	100	68.000	Sorex_araneus
ENSCPBG00000020897	-	99	50.867	ENSSSCG00000037861	-	99	49.133	Sus_scrofa
ENSCPBG00000020897	-	100	99.359	ENSUMAG00000016807	-	100	99.359	Ursus_maritimus
ENSCPBG00000020897	-	100	91.026	ENSXETG00000004519	rps27a	100	91.026	Xenopus_tropicalis