EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000020920 (Gene tree)
Gene ID: 101950646
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 207457 bases
Position: chr1:76307072-76514528
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029704	TUDOR	PF00567.24	5.3e-87	1	5
ENSCPBP00000029704	TUDOR	PF00567.24	5.3e-87	2	5
ENSCPBP00000029704	TUDOR	PF00567.24	5.3e-87	3	5
ENSCPBP00000029704	TUDOR	PF00567.24	5.3e-87	4	5
ENSCPBP00000029704	TUDOR	PF00567.24	5.3e-87	5	5
ENSCPBP00000029707	TUDOR	PF00567.24	2.9e-79	1	4
ENSCPBP00000029707	TUDOR	PF00567.24	2.9e-79	2	4
ENSCPBP00000029707	TUDOR	PF00567.24	2.9e-79	3	4
ENSCPBP00000029707	TUDOR	PF00567.24	2.9e-79	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000034964	RNF17-202	4688	-	ENSCPBP00000029707	1480 (aa)	-	-
ENSCPBT00000034961	RNF17-201	4850	-	ENSCPBP00000029704	1534 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000020920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000020920	RNF17	71	34.862	ENSCPBG00000003780	TDRD1	74	34.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020920	RNF17	97	57.162	ENSG00000132972	RNF17	99	59.698	Homo_sapiens
ENSCPBG00000020920	RNF17	87	32.568	ENSAPOG00000017034	rnf17	91	32.448	Acanthochromis_polyacanthus
ENSCPBG00000020920	RNF17	97	58.878	ENSAMEG00000017340	RNF17	91	58.548	Ailuropoda_melanoleuca
ENSCPBG00000020920	RNF17	98	33.376	ENSAOCG00000018283	rnf17	94	33.269	Amphiprion_ocellaris
ENSCPBG00000020920	RNF17	91	33.380	ENSAPEG00000022338	rnf17	95	33.286	Amphiprion_percula
ENSCPBG00000020920	RNF17	91	33.010	ENSATEG00000002067	rnf17	98	33.149	Anabas_testudineus
ENSCPBG00000020920	RNF17	93	57.034	ENSAPLG00000003969	RNF17	100	57.034	Anas_platyrhynchos
ENSCPBG00000020920	RNF17	98	51.898	ENSACAG00000001418	RNF17	94	51.767	Anolis_carolinensis
ENSCPBG00000020920	RNF17	88	59.276	ENSANAG00000029969	RNF17	89	59.276	Aotus_nancymaae
ENSCPBG00000020920	RNF17	98	31.931	ENSACLG00000018279	rnf17	94	31.919	Astatotilapia_calliptera
ENSCPBG00000020920	RNF17	78	36.303	ENSAMXG00000011002	rnf17	84	36.120	Astyanax_mexicanus
ENSCPBG00000020920	RNF17	65	57.353	ENSBTAG00000000278	RNF17	100	57.353	Bos_taurus
ENSCPBG00000020920	RNF17	97	56.324	ENSCJAG00000018937	RNF17	100	55.687	Callithrix_jacchus
ENSCPBG00000020920	RNF17	95	59.324	ENSCAFG00000007418	RNF17	90	60.643	Canis_familiaris
ENSCPBG00000020920	RNF17	61	67.220	ENSCAFG00020002919	-	100	67.220	Canis_lupus_dingo
ENSCPBG00000020920	RNF17	93	58.900	ENSCHIG00000026716	RNF17	100	58.088	Capra_hircus
ENSCPBG00000020920	RNF17	97	55.846	ENSTSYG00000000365	RNF17	99	53.824	Carlito_syrichta
ENSCPBG00000020920	RNF17	95	43.868	ENSCAPG00000012908	RNF17	99	49.589	Cavia_aperea
ENSCPBG00000020920	RNF17	97	56.739	ENSCCAG00000026725	RNF17	99	55.735	Cebus_capucinus
ENSCPBG00000020920	RNF17	97	57.321	ENSCATG00000040352	RNF17	100	56.618	Cercocebus_atys
ENSCPBG00000020920	RNF17	97	57.642	ENSCLAG00000004127	RNF17	93	57.312	Chinchilla_lanigera
ENSCPBG00000020920	RNF17	97	57.255	ENSCSAG00000018019	RNF17	92	56.993	Chlorocebus_sabaeus
ENSCPBG00000020920	RNF17	87	66.102	ENSCHOG00000013310	RNF17	82	66.102	Choloepus_hoffmanni
ENSCPBG00000020920	RNF17	97	56.899	ENSCANG00000032927	RNF17	99	56.406	Colobus_angolensis_palliatus
ENSCPBG00000020920	RNF17	96	57.266	ENSCGRG00001022658	Rnf17	91	57.001	Cricetulus_griseus_chok1gshd
ENSCPBG00000020920	RNF17	96	57.266	ENSCGRG00000009924	Rnf17	91	57.001	Cricetulus_griseus_crigri
ENSCPBG00000020920	RNF17	97	30.933	ENSCSEG00000008626	rnf17	99	31.167	Cynoglossus_semilaevis
ENSCPBG00000020920	RNF17	72	32.290	ENSCVAG00000017008	rnf17	83	32.290	Cyprinodon_variegatus
ENSCPBG00000020920	RNF17	96	31.234	ENSDARG00000056387	rnf17	92	31.234	Danio_rerio
ENSCPBG00000020920	RNF17	99	58.349	ENSDNOG00000006115	RNF17	93	58.027	Dasypus_novemcinctus
ENSCPBG00000020920	RNF17	54	62.150	ENSETEG00000017874	-	51	62.150	Echinops_telfairi
ENSCPBG00000020920	RNF17	52	48.392	ENSEASG00005001421	-	99	66.667	Equus_asinus_asinus
ENSCPBG00000020920	RNF17	99	59.293	ENSECAG00000017152	RNF17	93	58.971	Equus_caballus
ENSCPBG00000020920	RNF17	77	55.556	ENSEEUG00000000332	RNF17	79	54.131	Erinaceus_europaeus
ENSCPBG00000020920	RNF17	88	37.058	ENSELUG00000005626	rnf17	93	33.567	Esox_lucius
ENSCPBG00000020920	RNF17	99	58.650	ENSFCAG00000004914	RNF17	100	57.206	Felis_catus
ENSCPBG00000020920	RNF17	99	50.714	ENSFALG00000008766	RNF17	94	50.714	Ficedula_albicollis
ENSCPBG00000020920	RNF17	97	56.312	ENSFDAG00000017857	RNF17	91	55.981	Fukomys_damarensis
ENSCPBG00000020920	RNF17	97	32.085	ENSFHEG00000014822	rnf17	94	32.277	Fundulus_heteroclitus
ENSCPBG00000020920	RNF17	54	34.320	ENSGMOG00000015560	-	100	34.320	Gadus_morhua
ENSCPBG00000020920	RNF17	77	32.976	ENSGAFG00000004463	rnf17	89	33.089	Gambusia_affinis
ENSCPBG00000020920	RNF17	62	36.620	ENSGACG00000001340	-	100	36.620	Gasterosteus_aculeatus
ENSCPBG00000020920	RNF17	97	91.242	ENSGAGG00000016999	RNF17	92	91.242	Gopherus_agassizii
ENSCPBG00000020920	RNF17	97	57.105	ENSGGOG00000014491	RNF17	100	56.471	Gorilla_gorilla
ENSCPBG00000020920	RNF17	98	31.911	ENSHBUG00000003554	rnf17	94	31.899	Haplochromis_burtoni
ENSCPBG00000020920	RNF17	97	55.607	ENSHGLG00000007270	RNF17	92	55.279	Heterocephalus_glaber_female
ENSCPBG00000020920	RNF17	97	55.672	ENSHGLG00100017393	RNF17	92	55.344	Heterocephalus_glaber_male
ENSCPBG00000020920	RNF17	66	46.377	ENSHCOG00000017676	rnf17	79	46.377	Hippocampus_comes
ENSCPBG00000020920	RNF17	77	36.401	ENSIPUG00000001087	rnf17	79	36.401	Ictalurus_punctatus
ENSCPBG00000020920	RNF17	66	52.353	ENSSTOG00000011255	-	100	52.353	Ictidomys_tridecemlineatus
ENSCPBG00000020920	RNF17	97	57.680	ENSJJAG00000016584	Rnf17	92	57.350	Jaculus_jaculus
ENSCPBG00000020920	RNF17	97	31.907	ENSKMAG00000013403	rnf17	92	31.842	Kryptolebias_marmoratus
ENSCPBG00000020920	RNF17	90	32.066	ENSLBEG00000014910	rnf17	93	32.044	Labrus_bergylta
ENSCPBG00000020920	RNF17	83	48.043	ENSLACG00000000323	RNF17	99	48.000	Latimeria_chalumnae
ENSCPBG00000020920	RNF17	95	30.397	ENSLOCG00000010768	rnf17	92	30.271	Lepisosteus_oculatus
ENSCPBG00000020920	RNF17	97	57.321	ENSMFAG00000032388	RNF17	100	56.471	Macaca_fascicularis
ENSCPBG00000020920	RNF17	97	58.060	ENSMMUG00000014610	RNF17	100	56.471	Macaca_mulatta
ENSCPBG00000020920	RNF17	97	57.321	ENSMNEG00000011234	RNF17	100	56.471	Macaca_nemestrina
ENSCPBG00000020920	RNF17	97	56.927	ENSMLEG00000030227	RNF17	92	56.664	Mandrillus_leucophaeus
ENSCPBG00000020920	RNF17	77	34.233	ENSMAMG00000020403	rnf17	86	34.197	Mastacembelus_armatus
ENSCPBG00000020920	RNF17	98	31.995	ENSMZEG00005019166	rnf17	94	31.982	Maylandia_zebra
ENSCPBG00000020920	RNF17	81	55.107	ENSMGAG00000015138	RNF17	100	55.107	Meleagris_gallopavo
ENSCPBG00000020920	RNF17	96	56.120	ENSMAUG00000004788	Rnf17	91	55.853	Mesocricetus_auratus
ENSCPBG00000020920	RNF17	97	58.951	ENSMICG00000010364	RNF17	100	57.794	Microcebus_murinus
ENSCPBG00000020920	RNF17	65	58.419	ENSMOCG00000011818	-	100	58.419	Microtus_ochrogaster
ENSCPBG00000020920	RNF17	77	45.324	ENSMMOG00000019514	rnf17	82	45.324	Mola_mola
ENSCPBG00000020920	RNF17	97	63.051	ENSMODG00000007827	RNF17	91	62.722	Monodelphis_domestica
ENSCPBG00000020920	RNF17	73	41.176	ENSMALG00000016943	rnf17	95	41.176	Monopterus_albus
ENSCPBG00000020920	RNF17	96	57.095	MGP_CAROLIEiJ_G0019337	Rnf17	91	56.764	Mus_caroli
ENSCPBG00000020920	RNF17	96	56.963	ENSMUSG00000000365	Rnf17	91	56.698	Mus_musculus
ENSCPBG00000020920	RNF17	96	57.455	MGP_PahariEiJ_G0030355	Rnf17	92	56.870	Mus_pahari
ENSCPBG00000020920	RNF17	96	56.963	MGP_SPRETEiJ_G0020228	Rnf17	91	56.698	Mus_spretus
ENSCPBG00000020920	RNF17	97	59.524	ENSMPUG00000013305	RNF17	91	59.193	Mustela_putorius_furo
ENSCPBG00000020920	RNF17	99	58.098	ENSMLUG00000003903	RNF17	94	57.776	Myotis_lucifugus
ENSCPBG00000020920	RNF17	98	57.096	ENSNGAG00000013553	Rnf17	93	56.836	Nannospalax_galili
ENSCPBG00000020920	RNF17	94	31.144	ENSNBRG00000012006	rnf17	99	31.356	Neolamprologus_brichardi
ENSCPBG00000020920	RNF17	97	57.039	ENSNLEG00000013780	RNF17	100	56.130	Nomascus_leucogenys
ENSCPBG00000020920	RNF17	67	73.874	ENSMEUG00000003276	-	53	73.874	Notamacropus_eugenii
ENSCPBG00000020920	RNF17	87	60.000	ENSOPRG00000016743	-	80	60.000	Ochotona_princeps
ENSCPBG00000020920	RNF17	53	65.532	ENSODEG00000005443	-	100	65.532	Octodon_degus
ENSCPBG00000020920	RNF17	97	32.554	ENSONIG00000015746	rnf17	100	35.146	Oreochromis_niloticus
ENSCPBG00000020920	RNF17	97	59.618	ENSOCUG00000007384	RNF17	92	59.420	Oryctolagus_cuniculus
ENSCPBG00000020920	RNF17	91	32.355	ENSORLG00000012818	rnf17	98	32.616	Oryzias_latipes
ENSCPBG00000020920	RNF17	97	31.548	ENSORLG00020009879	-	92	31.866	Oryzias_latipes_hni
ENSCPBG00000020920	RNF17	97	31.530	ENSORLG00015013027	-	92	31.848	Oryzias_latipes_hsok
ENSCPBG00000020920	RNF17	72	33.962	ENSOMEG00000009891	rnf17	87	33.962	Oryzias_melastigma
ENSCPBG00000020920	RNF17	97	57.546	ENSOGAG00000014803	RNF17	92	57.218	Otolemur_garnettii
ENSCPBG00000020920	RNF17	99	58.462	ENSOARG00000014641	RNF17	95	58.205	Ovis_aries
ENSCPBG00000020920	RNF17	85	59.731	ENSPPAG00000028779	RNF17	100	56.573	Pan_paniscus
ENSCPBG00000020920	RNF17	99	58.585	ENSPPRG00000009230	RNF17	100	57.206	Panthera_pardus
ENSCPBG00000020920	RNF17	99	58.521	ENSPTIG00000001738	RNF17	100	57.059	Panthera_tigris_altaica
ENSCPBG00000020920	RNF17	97	57.087	ENSPTRG00000005713	RNF17	100	56.573	Pan_troglodytes
ENSCPBG00000020920	RNF17	97	57.387	ENSPANG00000007640	RNF17	100	56.618	Papio_anubis
ENSCPBG00000020920	RNF17	81	37.141	ENSPKIG00000001648	rnf17	94	37.141	Paramormyrops_kingsleyae
ENSCPBG00000020920	RNF17	78	83.717	ENSPSIG00000011245	RNF17	100	83.717	Pelodiscus_sinensis
ENSCPBG00000020920	RNF17	96	57.351	ENSPEMG00000008693	Rnf17	92	56.767	Peromyscus_maniculatus_bairdii
ENSCPBG00000020920	RNF17	71	63.996	ENSPCIG00000009190	-	93	63.787	Phascolarctos_cinereus
ENSCPBG00000020920	RNF17	97	32.532	ENSPFOG00000007124	rnf17	92	32.445	Poecilia_formosa
ENSCPBG00000020920	RNF17	95	35.470	ENSPLAG00000006198	rnf17	90	35.586	Poecilia_latipinna
ENSCPBG00000020920	RNF17	97	32.349	ENSPMEG00000022432	rnf17	96	31.557	Poecilia_mexicana
ENSCPBG00000020920	RNF17	77	34.117	ENSPREG00000001414	rnf17	83	34.215	Poecilia_reticulata
ENSCPBG00000020920	RNF17	97	56.965	ENSPPYG00000005215	RNF17	92	56.702	Pongo_abelii
ENSCPBG00000020920	RNF17	65	68.750	ENSPCAG00000002665	RNF17	66	68.750	Procavia_capensis
ENSCPBG00000020920	RNF17	90	46.983	ENSPCOG00000020211	RNF17	100	41.314	Propithecus_coquereli
ENSCPBG00000020920	RNF17	93	73.381	ENSPVAG00000013021	RNF17	89	73.381	Pteropus_vampyrus
ENSCPBG00000020920	RNF17	73	41.943	ENSPNAG00000027505	rnf17	85	35.897	Pygocentrus_nattereri
ENSCPBG00000020920	RNF17	97	57.087	ENSRNOG00000008059	Rnf17	92	57.039	Rattus_norvegicus
ENSCPBG00000020920	RNF17	97	56.382	ENSRBIG00000027010	RNF17	91	56.000	Rhinopithecus_bieti
ENSCPBG00000020920	RNF17	97	56.993	ENSRROG00000022801	RNF17	100	56.471	Rhinopithecus_roxellana
ENSCPBG00000020920	RNF17	97	56.673	ENSSBOG00000021661	RNF17	99	56.324	Saimiri_boliviensis_boliviensis
ENSCPBG00000020920	RNF17	97	63.272	ENSSHAG00000005609	RNF17	92	62.812	Sarcophilus_harrisii
ENSCPBG00000020920	RNF17	78	37.375	ENSSFOG00015023037	rnf17	89	37.375	Scleropages_formosus
ENSCPBG00000020920	RNF17	93	31.191	ENSSMAG00000007429	rnf17	95	31.123	Scophthalmus_maximus
ENSCPBG00000020920	RNF17	91	31.828	ENSSDUG00000013530	rnf17	97	31.781	Seriola_dumerili
ENSCPBG00000020920	RNF17	91	32.247	ENSSLDG00000019577	rnf17	96	32.157	Seriola_lalandi_dorsalis
ENSCPBG00000020920	RNF17	90	59.494	ENSSARG00000003016	RNF17	79	59.494	Sorex_araneus
ENSCPBG00000020920	RNF17	92	58.223	ENSSPUG00000008917	RNF17	94	58.223	Sphenodon_punctatus
ENSCPBG00000020920	RNF17	89	31.757	ENSSPAG00000001925	rnf17	96	31.590	Stegastes_partitus
ENSCPBG00000020920	RNF17	95	58.015	ENSSSCG00000009572	RNF17	90	58.867	Sus_scrofa
ENSCPBG00000020920	RNF17	69	60.377	ENSTGUG00000011267	-	100	60.377	Taeniopygia_guttata
ENSCPBG00000020920	RNF17	96	30.458	ENSTRUG00000015498	rnf17	93	30.458	Takifugu_rubripes
ENSCPBG00000020920	RNF17	77	33.525	ENSTNIG00000015681	rnf17	100	33.525	Tetraodon_nigroviridis
ENSCPBG00000020920	RNF17	89	51.753	ENSTBEG00000000282	RNF17	84	51.753	Tupaia_belangeri
ENSCPBG00000020920	RNF17	96	54.732	ENSTTRG00000012698	RNF17	91	54.180	Tursiops_truncatus
ENSCPBG00000020920	RNF17	64	49.341	ENSUMAG00000013953	-	100	49.341	Ursus_maritimus
ENSCPBG00000020920	RNF17	75	64.789	ENSVPAG00000011388	RNF17	72	64.789	Vicugna_pacos
ENSCPBG00000020920	RNF17	97	59.458	ENSVVUG00000006226	RNF17	91	62.845	Vulpes_vulpes
ENSCPBG00000020920	RNF17	77	42.699	ENSXETG00000034020	RNF17	100	47.115	Xenopus_tropicalis
ENSCPBG00000020920	RNF17	91	31.972	ENSXCOG00000018295	rnf17	97	32.135	Xiphophorus_couchianus
ENSCPBG00000020920	RNF17	91	31.831	ENSXMAG00000014747	rnf17	97	31.994	Xiphophorus_maculatus