EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000020967 (Gene tree)
Gene ID: 101933018
Gene Symbol: -
Alias: DKFZp564O176|FLJ30012|HQ0256|RRP3
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 13704 bases
Position: chrKK083110.1:1275844-1289547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029773	ResIII	PF04851.15	1.3e-05	1	1
ENSCPBP00000029772	ResIII	PF04851.15	1.3e-05	1	1
ENSCPBP00000029773	DEAD	PF00270.29	1.3e-47	1	1
ENSCPBP00000029772	DEAD	PF00270.29	1.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000035047	-	3168	-	ENSCPBP00000029773	453 (aa)	XP_005308980	UPI000388A3A2
ENSCPBT00000035046	-	2911	-	ENSCPBP00000029772	464 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000020967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000020967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000020967	-	74	32.303	ENSCPBG00000019934	-	51	32.303
ENSCPBG00000020967	-	82	32.041	ENSCPBG00000026547	DDX4	66	32.041
ENSCPBG00000020967	-	77	33.714	ENSCPBG00000000975	EIF4A2	95	33.548
ENSCPBG00000020967	-	87	43.750	ENSCPBG00000008942	DDX24	63	43.750
ENSCPBG00000020967	-	92	33.941	ENSCPBG00000021681	DDX10	64	33.941
ENSCPBG00000020967	-	67	30.820	ENSCPBG00000004702	EIF4A1	82	30.820
ENSCPBG00000020967	-	90	46.919	ENSCPBG00000012500	DDX49	88	46.919
ENSCPBG00000020967	-	84	32.468	ENSCPBG00000004323	DDX6	78	32.468
ENSCPBG00000020967	-	78	34.332	ENSCPBG00000022192	DDX41	64	34.332
ENSCPBG00000020967	-	50	34.649	ENSCPBG00000014671	-	83	34.649
ENSCPBG00000020967	-	77	38.904	ENSCPBG00000010529	DDX18	54	38.904
ENSCPBG00000020967	-	85	33.716	ENSCPBG00000024556	DDX56	77	33.563
ENSCPBG00000020967	-	75	40.678	ENSCPBG00000023015	-	74	39.617
ENSCPBG00000020967	-	79	34.091	ENSCPBG00000019916	-	58	34.091
ENSCPBG00000020967	-	71	30.203	ENSCPBG00000001164	DDX51	53	30.334
ENSCPBG00000020967	-	72	32.317	ENSCPBG00000017801	EIF4A3	95	32.407
ENSCPBG00000020967	-	73	34.943	ENSCPBG00000025960	DDX55	64	34.943
ENSCPBG00000020967	-	81	33.838	ENSCPBG00000012105	DDX28	81	33.838
ENSCPBG00000020967	-	75	30.966	ENSCPBG00000009806	DDX52	55	30.966
ENSCPBG00000020967	-	83	30.211	ENSCPBG00000021215	DDX31	74	30.353
ENSCPBG00000020967	-	72	40.233	ENSCPBG00000009227	DDX5	56	40.233
ENSCPBG00000020967	-	81	34.667	ENSCPBG00000028288	DDX59	61	34.667
ENSCPBG00000020967	-	76	34.294	ENSCPBG00000011879	DDX39A	81	34.294
ENSCPBG00000020967	-	73	44.615	ENSCPBG00000013330	DDX1	62	44.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000020967	-	99	90.330	ENSG00000213782	DDX47	100	90.330	Homo_sapiens
ENSCPBG00000020967	-	95	84.722	ENSAPOG00000021751	ddx47	91	84.475	Acanthochromis_polyacanthus
ENSCPBG00000020967	-	99	89.890	ENSAMEG00000010740	DDX47	100	89.890	Ailuropoda_melanoleuca
ENSCPBG00000020967	-	94	84.977	ENSACIG00000022802	ddx47	90	84.828	Amphilophus_citrinellus
ENSCPBG00000020967	-	95	84.687	ENSAOCG00000015213	ddx47	90	84.475	Amphiprion_ocellaris
ENSCPBG00000020967	-	96	84.138	ENSAPEG00000014476	ddx47	94	86.104	Amphiprion_percula
ENSCPBG00000020967	-	92	85.885	ENSATEG00000010277	ddx47	88	85.613	Anabas_testudineus
ENSCPBG00000020967	-	94	92.689	ENSAPLG00000015324	DDX47	95	92.466	Anas_platyrhynchos
ENSCPBG00000020967	-	99	91.275	ENSACAG00000010648	DDX47	99	91.275	Anolis_carolinensis
ENSCPBG00000020967	-	80	91.057	ENSANAG00000025235	DDX47	100	91.057	Aotus_nancymaae
ENSCPBG00000020967	-	96	84.296	ENSAMXG00000010727	ddx47	92	84.296	Astyanax_mexicanus
ENSCPBG00000020967	-	99	89.278	ENSBTAG00000019608	DDX47	100	89.278	Bos_taurus
ENSCPBG00000020967	-	92	66.986	WBGene00012059	T26G10.1	87	66.824	Caenorhabditis_elegans
ENSCPBG00000020967	-	95	93.056	ENSCJAG00000021633	DDX47	100	90.549	Callithrix_jacchus
ENSCPBG00000020967	-	97	90.337	ENSCAFG00000013224	DDX47	95	90.132	Canis_familiaris
ENSCPBG00000020967	-	97	90.337	ENSCAFG00020006612	DDX47	100	90.132	Canis_lupus_dingo
ENSCPBG00000020967	-	99	89.254	ENSCHIG00000026011	DDX47	99	89.254	Capra_hircus
ENSCPBG00000020967	-	99	89.451	ENSTSYG00000002978	DDX47	100	89.451	Carlito_syrichta
ENSCPBG00000020967	-	59	89.726	ENSCAPG00000002814	DDX47	100	89.726	Cavia_aperea
ENSCPBG00000020967	-	97	89.640	ENSCPOG00000035172	DDX47	100	89.451	Cavia_porcellus
ENSCPBG00000020967	-	99	90.549	ENSCCAG00000025717	DDX47	100	90.549	Cebus_capucinus
ENSCPBG00000020967	-	99	90.265	ENSCATG00000014281	-	99	90.265	Cercocebus_atys
ENSCPBG00000020967	-	54	85.600	ENSCATG00000038188	-	99	85.600	Cercocebus_atys
ENSCPBG00000020967	-	99	89.648	ENSCLAG00000015856	DDX47	100	89.648	Chinchilla_lanigera
ENSCPBG00000020967	-	99	90.708	ENSCSAG00000008569	DDX47	99	90.708	Chlorocebus_sabaeus
ENSCPBG00000020967	-	99	56.923	ENSCHOG00000010943	DDX47	100	56.923	Choloepus_hoffmanni
ENSCPBG00000020967	-	88	74.372	ENSCING00000002081	-	95	70.629	Ciona_intestinalis
ENSCPBG00000020967	-	96	71.264	ENSCSAVG00000011566	-	97	71.264	Ciona_savignyi
ENSCPBG00000020967	-	99	90.487	ENSCANG00000040222	DDX47	99	90.487	Colobus_angolensis_palliatus
ENSCPBG00000020967	-	99	89.011	ENSCGRG00001014927	Ddx47	100	89.451	Cricetulus_griseus_chok1gshd
ENSCPBG00000020967	-	99	89.011	ENSCGRG00000010351	Ddx47	100	89.451	Cricetulus_griseus_crigri
ENSCPBG00000020967	-	89	84.767	ENSCSEG00000007687	ddx47	92	84.767	Cynoglossus_semilaevis
ENSCPBG00000020967	-	99	83.151	ENSDNOG00000040799	DDX47	100	83.151	Dasypus_novemcinctus
ENSCPBG00000020967	-	97	71.982	FBgn0032919	CG9253	87	71.982	Drosophila_melanogaster
ENSCPBG00000020967	-	74	95.349	ENSETEG00000011487	DDX47	83	95.349	Echinops_telfairi
ENSCPBG00000020967	-	99	89.890	ENSEASG00005014653	DDX47	100	89.890	Equus_asinus_asinus
ENSCPBG00000020967	-	99	89.890	ENSECAG00000023622	DDX47	100	89.890	Equus_caballus
ENSCPBG00000020967	-	83	92.547	ENSEEUG00000008639	DDX47	84	92.547	Erinaceus_europaeus
ENSCPBG00000020967	-	95	83.953	ENSELUG00000009495	ddx47	81	83.834	Esox_lucius
ENSCPBG00000020967	-	99	89.868	ENSFCAG00000013990	DDX47	100	89.868	Felis_catus
ENSCPBG00000020967	-	92	94.749	ENSFALG00000011391	DDX47	94	94.292	Ficedula_albicollis
ENSCPBG00000020967	-	99	88.987	ENSFDAG00000014635	-	100	88.987	Fukomys_damarensis
ENSCPBG00000020967	-	65	68.571	ENSFDAG00000004127	-	73	67.857	Fukomys_damarensis
ENSCPBG00000020967	-	94	84.670	ENSFHEG00000011435	ddx47	91	83.486	Fundulus_heteroclitus
ENSCPBG00000020967	-	85	84.856	ENSGMOG00000010290	ddx47	100	84.856	Gadus_morhua
ENSCPBG00000020967	-	92	94.005	ENSGALG00000011794	DDX47	97	92.135	Gallus_gallus
ENSCPBG00000020967	-	94	85.047	ENSGAFG00000017403	ddx47	91	84.793	Gambusia_affinis
ENSCPBG00000020967	-	95	84.455	ENSGACG00000007092	ddx47	93	84.455	Gasterosteus_aculeatus
ENSCPBG00000020967	-	100	95.815	ENSGAGG00000023801	DDX47	93	95.699	Gopherus_agassizii
ENSCPBG00000020967	-	99	90.549	ENSGGOG00000005882	DDX47	100	90.549	Gorilla_gorilla
ENSCPBG00000020967	-	94	84.346	ENSHBUG00000022213	ddx47	91	84.211	Haplochromis_burtoni
ENSCPBG00000020967	-	99	89.648	ENSHGLG00000007623	DDX47	100	89.648	Heterocephalus_glaber_female
ENSCPBG00000020967	-	99	89.648	ENSHGLG00100009764	DDX47	100	89.648	Heterocephalus_glaber_male
ENSCPBG00000020967	-	95	85.151	ENSHCOG00000005496	ddx47	90	84.282	Hippocampus_comes
ENSCPBG00000020967	-	96	84.404	ENSIPUG00000023788	ddx47	92	84.404	Ictalurus_punctatus
ENSCPBG00000020967	-	94	92.488	ENSSTOG00000027266	DDX47	97	92.488	Ictidomys_tridecemlineatus
ENSCPBG00000020967	-	99	89.231	ENSJJAG00000000118	Ddx47	100	89.231	Jaculus_jaculus
ENSCPBG00000020967	-	93	84.397	ENSKMAG00000013071	ddx47	93	80.568	Kryptolebias_marmoratus
ENSCPBG00000020967	-	92	85.542	ENSLBEG00000028348	ddx47	88	84.455	Labrus_bergylta
ENSCPBG00000020967	-	94	88.318	ENSLACG00000013814	DDX47	96	87.414	Latimeria_chalumnae
ENSCPBG00000020967	-	99	90.132	ENSLAFG00000015474	DDX47	100	90.132	Loxodonta_africana
ENSCPBG00000020967	-	96	92.874	ENSMFAG00000042577	DDX47	98	91.256	Macaca_fascicularis
ENSCPBG00000020967	-	96	92.874	ENSMMUG00000017993	DDX47	98	91.256	Macaca_mulatta
ENSCPBG00000020967	-	99	79.204	ENSMNEG00000044164	DDX47	99	79.204	Macaca_nemestrina
ENSCPBG00000020967	-	61	80.144	ENSMLEG00000037204	-	92	80.144	Mandrillus_leucophaeus
ENSCPBG00000020967	-	99	90.265	ENSMLEG00000040358	-	99	90.265	Mandrillus_leucophaeus
ENSCPBG00000020967	-	96	83.028	ENSMAMG00000008915	ddx47	92	82.805	Mastacembelus_armatus
ENSCPBG00000020967	-	94	71.296	ENSMZEG00005004902	DDX47	91	71.429	Maylandia_zebra
ENSCPBG00000020967	-	89	47.643	ENSMZEG00005022989	-	91	47.643	Maylandia_zebra
ENSCPBG00000020967	-	92	92.363	ENSMGAG00000011857	DDX47	99	92.148	Meleagris_gallopavo
ENSCPBG00000020967	-	99	89.451	ENSMAUG00000012214	Ddx47	100	89.451	Mesocricetus_auratus
ENSCPBG00000020967	-	83	93.291	ENSMICG00000010086	DDX47	100	94.175	Microcebus_murinus
ENSCPBG00000020967	-	99	90.110	ENSMOCG00000003693	Ddx47	100	90.110	Microtus_ochrogaster
ENSCPBG00000020967	-	93	81.948	ENSMMOG00000008610	ddx47	94	81.149	Mola_mola
ENSCPBG00000020967	-	99	88.816	ENSMODG00000018223	DDX47	99	88.816	Monodelphis_domestica
ENSCPBG00000020967	-	93	85.273	ENSMALG00000002420	ddx47	89	85.116	Monopterus_albus
ENSCPBG00000020967	-	99	89.670	MGP_CAROLIEiJ_G0028986	Ddx47	100	93.333	Mus_caroli
ENSCPBG00000020967	-	99	89.890	ENSMUSG00000030204	Ddx47	100	93.333	Mus_musculus
ENSCPBG00000020967	-	98	90.402	MGP_PahariEiJ_G0022748	Ddx47	96	93.333	Mus_pahari
ENSCPBG00000020967	-	99	89.868	MGP_SPRETEiJ_G0030034	Ddx47	100	93.333	Mus_spretus
ENSCPBG00000020967	-	99	89.890	ENSMPUG00000011726	DDX47	100	89.890	Mustela_putorius_furo
ENSCPBG00000020967	-	99	90.330	ENSMLUG00000003163	DDX47	100	90.330	Myotis_lucifugus
ENSCPBG00000020967	-	96	91.724	ENSNGAG00000020166	Ddx47	96	91.724	Nannospalax_galili
ENSCPBG00000020967	-	94	84.112	ENSNBRG00000001394	ddx47	92	83.982	Neolamprologus_brichardi
ENSCPBG00000020967	-	99	90.549	ENSNLEG00000003605	DDX47	100	90.549	Nomascus_leucogenys
ENSCPBG00000020967	-	87	81.980	ENSMEUG00000005930	DDX47	99	82.234	Notamacropus_eugenii
ENSCPBG00000020967	-	78	93.667	ENSOPRG00000014446	DDX47	79	93.667	Ochotona_princeps
ENSCPBG00000020967	-	95	92.361	ENSODEG00000012890	DDX47	100	88.503	Octodon_degus
ENSCPBG00000020967	-	98	83.521	ENSONIG00000008325	ddx47	98	83.521	Oreochromis_niloticus
ENSCPBG00000020967	-	58	90.706	ENSOANG00000003026	-	94	90.706	Ornithorhynchus_anatinus
ENSCPBG00000020967	-	99	89.011	ENSOCUG00000014390	DDX47	100	89.231	Oryctolagus_cuniculus
ENSCPBG00000020967	-	94	85.047	ENSORLG00000015021	ddx47	89	84.954	Oryzias_latipes
ENSCPBG00000020967	-	93	85.308	ENSORLG00020005546	ddx47	90	87.121	Oryzias_latipes_hni
ENSCPBG00000020967	-	93	85.071	ENSORLG00015017712	ddx47	89	84.954	Oryzias_latipes_hsok
ENSCPBG00000020967	-	95	84.223	ENSOMEG00000008065	ddx47	89	84.223	Oryzias_melastigma
ENSCPBG00000020967	-	99	86.918	ENSOGAG00000003748	DDX47	100	86.918	Otolemur_garnettii
ENSCPBG00000020967	-	99	89.254	ENSOARG00000020845	DDX47	97	89.254	Ovis_aries
ENSCPBG00000020967	-	99	90.330	ENSPPAG00000039793	DDX47	100	90.330	Pan_paniscus
ENSCPBG00000020967	-	99	89.890	ENSPPRG00000017561	DDX47	100	89.890	Panthera_pardus
ENSCPBG00000020967	-	99	89.890	ENSPTIG00000019604	DDX47	100	89.890	Panthera_tigris_altaica
ENSCPBG00000020967	-	99	90.330	ENSPTRG00000033743	DDX47	100	90.330	Pan_troglodytes
ENSCPBG00000020967	-	99	90.265	ENSPANG00000016430	DDX47	99	90.265	Papio_anubis
ENSCPBG00000020967	-	93	83.886	ENSPKIG00000006718	ddx47	86	86.364	Paramormyrops_kingsleyae
ENSCPBG00000020967	-	97	96.347	ENSPSIG00000006056	DDX47	96	96.347	Pelodiscus_sinensis
ENSCPBG00000020967	-	92	85.646	ENSPMGG00000009920	ddx47	89	85.377	Periophthalmus_magnuspinnatus
ENSCPBG00000020967	-	99	90.110	ENSPEMG00000009746	Ddx47	100	90.110	Peromyscus_maniculatus_bairdii
ENSCPBG00000020967	-	93	87.678	ENSPMAG00000000186	-	100	87.678	Petromyzon_marinus
ENSCPBG00000020967	-	99	88.352	ENSPCIG00000029927	DDX47	99	88.352	Phascolarctos_cinereus
ENSCPBG00000020967	-	94	85.280	ENSPFOG00000003330	ddx47	92	81.264	Poecilia_formosa
ENSCPBG00000020967	-	88	80.201	ENSPLAG00000014318	ddx47	90	76.415	Poecilia_latipinna
ENSCPBG00000020967	-	94	85.280	ENSPMEG00000018616	ddx47	92	81.264	Poecilia_mexicana
ENSCPBG00000020967	-	94	85.581	ENSPREG00000015560	ddx47	97	79.957	Poecilia_reticulata
ENSCPBG00000020967	-	99	90.110	ENSPPYG00000004309	DDX47	100	90.110	Pongo_abelii
ENSCPBG00000020967	-	62	92.617	ENSPCAG00000013197	-	71	92.617	Procavia_capensis
ENSCPBG00000020967	-	99	89.670	ENSPCOG00000028218	DDX47	100	89.670	Propithecus_coquereli
ENSCPBG00000020967	-	99	86.123	ENSPVAG00000002640	DDX47	99	86.123	Pteropus_vampyrus
ENSCPBG00000020967	-	94	84.346	ENSPNYG00000020669	ddx47	91	84.211	Pundamilia_nyererei
ENSCPBG00000020967	-	94	84.112	ENSPNAG00000011435	ddx47	93	82.877	Pygocentrus_nattereri
ENSCPBG00000020967	-	99	89.670	ENSRNOG00000007838	Ddx47	100	89.670	Rattus_norvegicus
ENSCPBG00000020967	-	99	90.265	ENSRBIG00000026934	DDX47	99	90.265	Rhinopithecus_bieti
ENSCPBG00000020967	-	99	90.265	ENSRROG00000025014	DDX47	99	90.265	Rhinopithecus_roxellana
ENSCPBG00000020967	-	88	56.533	YHR065C	-	84	54.739	Saccharomyces_cerevisiae
ENSCPBG00000020967	-	99	90.330	ENSSBOG00000035866	DDX47	100	90.330	Saimiri_boliviensis_boliviensis
ENSCPBG00000020967	-	99	88.453	ENSSHAG00000010825	DDX47	89	88.453	Sarcophilus_harrisii
ENSCPBG00000020967	-	92	86.364	ENSSFOG00015013392	ddx47	92	85.681	Scleropages_formosus
ENSCPBG00000020967	-	92	86.265	ENSSMAG00000004179	ddx47	90	84.091	Scophthalmus_maximus
ENSCPBG00000020967	-	92	85.301	ENSSDUG00000018110	ddx47	80	85.167	Seriola_dumerili
ENSCPBG00000020967	-	93	84.561	ENSSLDG00000018142	ddx47	87	84.419	Seriola_lalandi_dorsalis
ENSCPBG00000020967	-	65	88.963	ENSSARG00000007535	DDX47	100	88.963	Sorex_araneus
ENSCPBG00000020967	-	94	95.059	ENSSPUG00000004958	DDX47	93	95.059	Sphenodon_punctatus
ENSCPBG00000020967	-	94	85.714	ENSSPAG00000016431	ddx47	88	84.475	Stegastes_partitus
ENSCPBG00000020967	-	99	89.451	ENSSSCG00000033149	DDX47	96	92.488	Sus_scrofa
ENSCPBG00000020967	-	92	94.033	ENSTGUG00000009385	DDX47	98	92.170	Taeniopygia_guttata
ENSCPBG00000020967	-	94	84.906	ENSTRUG00000021826	ddx47	90	85.176	Takifugu_rubripes
ENSCPBG00000020967	-	99	78.022	ENSTBEG00000013697	DDX47	100	78.022	Tupaia_belangeri
ENSCPBG00000020967	-	99	88.914	ENSTTRG00000015036	DDX47	99	88.914	Tursiops_truncatus
ENSCPBG00000020967	-	99	90.110	ENSUAMG00000016382	DDX47	99	90.110	Ursus_americanus
ENSCPBG00000020967	-	99	90.110	ENSUMAG00000002358	DDX47	100	90.110	Ursus_maritimus
ENSCPBG00000020967	-	77	71.795	ENSVPAG00000012483	-	100	71.795	Vicugna_pacos
ENSCPBG00000020967	-	58	97.059	ENSVPAG00000004648	-	59	97.059	Vicugna_pacos
ENSCPBG00000020967	-	97	89.910	ENSVVUG00000004697	DDX47	95	89.716	Vulpes_vulpes
ENSCPBG00000020967	-	98	88.789	ENSXETG00000022984	ddx47	99	89.013	Xenopus_tropicalis
ENSCPBG00000020967	-	94	85.748	ENSXCOG00000015880	ddx47	97	81.699	Xiphophorus_couchianus
ENSCPBG00000020967	-	94	85.514	ENSXMAG00000008268	ddx47	86	81.481	Xiphophorus_maculatus