EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000021101 (Gene tree)
Gene ID: 101941817
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 10167 bases
Position: chrKK088234.1:13059257-13069423
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000029950	PseudoU_synth_2	PF00849.22	9.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000035251	RPUSD1-201	2545	-	ENSCPBP00000029950	303 (aa)	XP_005289029	UPI00038911CA

Gene Model

Click here to download ENSCPBG00000021101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021101	RPUSD1	99	66.019	ENSG00000007376	RPUSD1	92	85.393	Homo_sapiens
ENSCPBG00000021101	RPUSD1	99	61.462	ENSAPOG00000022221	rpusd1	98	61.513	Acanthochromis_polyacanthus
ENSCPBG00000021101	RPUSD1	99	66.776	ENSAMEG00000007461	RPUSD1	99	66.776	Ailuropoda_melanoleuca
ENSCPBG00000021101	RPUSD1	99	60.784	ENSACIG00000015863	rpusd1	98	61.438	Amphilophus_citrinellus
ENSCPBG00000021101	RPUSD1	99	60.526	ENSAOCG00000021975	rpusd1	95	60.855	Amphiprion_ocellaris
ENSCPBG00000021101	RPUSD1	99	60.855	ENSAPEG00000001316	rpusd1	95	61.184	Amphiprion_percula
ENSCPBG00000021101	RPUSD1	99	61.842	ENSATEG00000002984	rpusd1	98	62.171	Anabas_testudineus
ENSCPBG00000021101	RPUSD1	78	80.672	ENSAPLG00000012316	RPUSD1	98	80.672	Anas_platyrhynchos
ENSCPBG00000021101	RPUSD1	99	79.070	ENSACAG00000008953	RPUSD1	99	79.070	Anolis_carolinensis
ENSCPBG00000021101	RPUSD1	99	64.610	ENSANAG00000024709	RPUSD1	99	64.610	Aotus_nancymaae
ENSCPBG00000021101	RPUSD1	99	61.765	ENSACLG00000013692	rpusd1	98	61.765	Astatotilapia_calliptera
ENSCPBG00000021101	RPUSD1	99	61.589	ENSAMXG00000019802	rpusd1	99	61.589	Astyanax_mexicanus
ENSCPBG00000021101	RPUSD1	99	66.118	ENSBTAG00000000179	RPUSD1	99	66.019	Bos_taurus
ENSCPBG00000021101	RPUSD1	99	64.423	ENSCJAG00000012253	RPUSD1	99	64.423	Callithrix_jacchus
ENSCPBG00000021101	RPUSD1	99	65.461	ENSCAFG00000019614	RPUSD1	99	65.789	Canis_familiaris
ENSCPBG00000021101	RPUSD1	99	65.461	ENSCAFG00020008891	RPUSD1	99	65.789	Canis_lupus_dingo
ENSCPBG00000021101	RPUSD1	99	66.118	ENSCHIG00000012872	RPUSD1	99	65.605	Capra_hircus
ENSCPBG00000021101	RPUSD1	99	65.461	ENSTSYG00000036934	RPUSD1	92	75.000	Carlito_syrichta
ENSCPBG00000021101	RPUSD1	99	65.246	ENSCAPG00000014219	RPUSD1	99	65.246	Cavia_aperea
ENSCPBG00000021101	RPUSD1	99	65.246	ENSCPOG00000034604	RPUSD1	99	65.246	Cavia_porcellus
ENSCPBG00000021101	RPUSD1	99	64.935	ENSCCAG00000034385	RPUSD1	99	64.935	Cebus_capucinus
ENSCPBG00000021101	RPUSD1	99	66.019	ENSCATG00000042983	RPUSD1	92	76.667	Cercocebus_atys
ENSCPBG00000021101	RPUSD1	99	64.194	ENSCLAG00000013966	RPUSD1	99	64.286	Chinchilla_lanigera
ENSCPBG00000021101	RPUSD1	99	65.696	ENSCSAG00000012121	RPUSD1	99	65.696	Chlorocebus_sabaeus
ENSCPBG00000021101	RPUSD1	87	70.412	ENSCANG00000028576	RPUSD1	92	76.667	Colobus_angolensis_palliatus
ENSCPBG00000021101	RPUSD1	99	66.885	ENSCGRG00001014253	Rpusd1	99	66.885	Cricetulus_griseus_chok1gshd
ENSCPBG00000021101	RPUSD1	99	66.885	ENSCGRG00000017995	Rpusd1	99	66.885	Cricetulus_griseus_crigri
ENSCPBG00000021101	RPUSD1	99	61.589	ENSCSEG00000018512	rpusd1	99	61.589	Cynoglossus_semilaevis
ENSCPBG00000021101	RPUSD1	99	62.046	ENSCVAG00000022746	rpusd1	98	62.046	Cyprinodon_variegatus
ENSCPBG00000021101	RPUSD1	99	66.887	ENSDARG00000060192	rpusd1	99	66.887	Danio_rerio
ENSCPBG00000021101	RPUSD1	99	65.461	ENSDNOG00000003721	RPUSD1	99	65.461	Dasypus_novemcinctus
ENSCPBG00000021101	RPUSD1	99	65.132	ENSDORG00000026656	Rpusd1	99	65.574	Dipodomys_ordii
ENSCPBG00000021101	RPUSD1	99	46.835	ENSEBUG00000008767	rpusd1	93	46.835	Eptatretus_burgeri
ENSCPBG00000021101	RPUSD1	99	63.125	ENSEASG00005018421	RPUSD1	75	64.423	Equus_asinus_asinus
ENSCPBG00000021101	RPUSD1	99	60.855	ENSELUG00000014307	rpusd1	88	61.765	Esox_lucius
ENSCPBG00000021101	RPUSD1	99	65.461	ENSFCAG00000010359	RPUSD1	99	65.461	Felis_catus
ENSCPBG00000021101	RPUSD1	99	82.450	ENSFALG00000003211	RPUSD1	99	82.450	Ficedula_albicollis
ENSCPBG00000021101	RPUSD1	99	64.169	ENSFDAG00000013398	RPUSD1	99	64.169	Fukomys_damarensis
ENSCPBG00000021101	RPUSD1	99	60.596	ENSFHEG00000004736	rpusd1	98	61.184	Fundulus_heteroclitus
ENSCPBG00000021101	RPUSD1	99	60.066	ENSGMOG00000010756	rpusd1	98	60.855	Gadus_morhua
ENSCPBG00000021101	RPUSD1	99	83.775	ENSGALG00000005315	RPUSD1	99	83.775	Gallus_gallus
ENSCPBG00000021101	RPUSD1	99	61.921	ENSGAFG00000009886	rpusd1	98	61.921	Gambusia_affinis
ENSCPBG00000021101	RPUSD1	98	61.258	ENSGACG00000014276	rpusd1	98	61.842	Gasterosteus_aculeatus
ENSCPBG00000021101	RPUSD1	100	97.030	ENSGAGG00000004181	RPUSD1	100	97.030	Gopherus_agassizii
ENSCPBG00000021101	RPUSD1	99	66.343	ENSGGOG00000013997	RPUSD1	99	66.343	Gorilla_gorilla
ENSCPBG00000021101	RPUSD1	99	62.092	ENSHBUG00000023728	rpusd1	98	62.092	Haplochromis_burtoni
ENSCPBG00000021101	RPUSD1	99	64.145	ENSHGLG00000002595	RPUSD1	99	63.961	Heterocephalus_glaber_female
ENSCPBG00000021101	RPUSD1	99	64.145	ENSHGLG00100014303	RPUSD1	99	63.961	Heterocephalus_glaber_male
ENSCPBG00000021101	RPUSD1	99	61.794	ENSHCOG00000002390	rpusd1	99	61.794	Hippocampus_comes
ENSCPBG00000021101	RPUSD1	100	65.017	ENSIPUG00000001570	rpusd1	99	65.017	Ictalurus_punctatus
ENSCPBG00000021101	RPUSD1	99	65.260	ENSSTOG00000004276	RPUSD1	99	65.260	Ictidomys_tridecemlineatus
ENSCPBG00000021101	RPUSD1	99	65.132	ENSJJAG00000015696	Rpusd1	99	65.461	Jaculus_jaculus
ENSCPBG00000021101	RPUSD1	99	61.333	ENSKMAG00000017287	rpusd1	98	61.333	Kryptolebias_marmoratus
ENSCPBG00000021101	RPUSD1	99	61.889	ENSLBEG00000022502	rpusd1	98	62.541	Labrus_bergylta
ENSCPBG00000021101	RPUSD1	99	61.889	ENSLBEG00000013354	RPUSD1	98	62.541	Labrus_bergylta
ENSCPBG00000021101	RPUSD1	99	76.490	ENSLACG00000008869	RPUSD1	99	76.490	Latimeria_chalumnae
ENSCPBG00000021101	RPUSD1	71	80.374	ENSLOCG00000005682	rpusd1	99	80.374	Lepisosteus_oculatus
ENSCPBG00000021101	RPUSD1	99	63.430	ENSLAFG00000002115	RPUSD1	99	63.430	Loxodonta_africana
ENSCPBG00000021101	RPUSD1	99	66.019	ENSMFAG00000003961	RPUSD1	92	76.667	Macaca_fascicularis
ENSCPBG00000021101	RPUSD1	99	66.019	ENSMMUG00000000842	RPUSD1	92	76.667	Macaca_mulatta
ENSCPBG00000021101	RPUSD1	99	66.019	ENSMNEG00000042712	RPUSD1	92	76.667	Macaca_nemestrina
ENSCPBG00000021101	RPUSD1	99	66.019	ENSMLEG00000030591	RPUSD1	92	76.667	Mandrillus_leucophaeus
ENSCPBG00000021101	RPUSD1	99	60.328	ENSMAMG00000004735	rpusd1	98	61.311	Mastacembelus_armatus
ENSCPBG00000021101	RPUSD1	99	61.765	ENSMZEG00005003214	rpusd1	98	61.765	Maylandia_zebra
ENSCPBG00000021101	RPUSD1	98	81.879	ENSMGAG00000005447	RPUSD1	99	81.879	Meleagris_gallopavo
ENSCPBG00000021101	RPUSD1	83	67.843	ENSMAUG00000019998	Rpusd1	97	67.843	Mesocricetus_auratus
ENSCPBG00000021101	RPUSD1	99	66.118	ENSMICG00000017561	RPUSD1	100	67.586	Microcebus_murinus
ENSCPBG00000021101	RPUSD1	99	66.118	ENSMOCG00000014082	Rpusd1	99	65.584	Microtus_ochrogaster
ENSCPBG00000021101	RPUSD1	99	59.344	ENSMMOG00000012569	rpusd1	99	60.784	Mola_mola
ENSCPBG00000021101	RPUSD1	99	74.172	ENSMODG00000016882	RPUSD1	98	74.172	Monodelphis_domestica
ENSCPBG00000021101	RPUSD1	99	61.639	ENSMALG00000017818	rpusd1	98	62.215	Monopterus_albus
ENSCPBG00000021101	RPUSD1	99	65.789	MGP_CAROLIEiJ_G0021244	Rpusd1	99	65.902	Mus_caroli
ENSCPBG00000021101	RPUSD1	99	66.118	ENSMUSG00000041199	Rpusd1	99	66.118	Mus_musculus
ENSCPBG00000021101	RPUSD1	99	65.461	MGP_PahariEiJ_G0023562	Rpusd1	99	65.902	Mus_pahari
ENSCPBG00000021101	RPUSD1	99	66.118	MGP_SPRETEiJ_G0022155	Rpusd1	99	66.118	Mus_spretus
ENSCPBG00000021101	RPUSD1	99	62.171	ENSMPUG00000015897	RPUSD1	99	62.829	Mustela_putorius_furo
ENSCPBG00000021101	RPUSD1	99	64.744	ENSMLUG00000001089	RPUSD1	99	64.744	Myotis_lucifugus
ENSCPBG00000021101	RPUSD1	99	65.132	ENSNGAG00000003595	Rpusd1	99	64.918	Nannospalax_galili
ENSCPBG00000021101	RPUSD1	99	62.667	ENSNBRG00000006457	rpusd1	98	63.123	Neolamprologus_brichardi
ENSCPBG00000021101	RPUSD1	54	54.386	ENSNLEG00000008424	-	98	54.386	Nomascus_leucogenys
ENSCPBG00000021101	RPUSD1	99	72.848	ENSMEUG00000016049	RPUSD1	99	72.848	Notamacropus_eugenii
ENSCPBG00000021101	RPUSD1	99	59.539	ENSOPRG00000008340	RPUSD1	99	59.539	Ochotona_princeps
ENSCPBG00000021101	RPUSD1	99	65.789	ENSODEG00000016945	RPUSD1	99	65.789	Octodon_degus
ENSCPBG00000021101	RPUSD1	99	61.639	ENSONIG00000015672	rpusd1	99	61.639	Oreochromis_niloticus
ENSCPBG00000021101	RPUSD1	99	61.130	ENSORLG00000013009	rpusd1	98	61.130	Oryzias_latipes
ENSCPBG00000021101	RPUSD1	99	61.130	ENSORLG00020010382	rpusd1	98	61.130	Oryzias_latipes_hni
ENSCPBG00000021101	RPUSD1	99	60.797	ENSORLG00015021354	rpusd1	98	60.797	Oryzias_latipes_hsok
ENSCPBG00000021101	RPUSD1	99	62.000	ENSOMEG00000021426	rpusd1	98	62.000	Oryzias_melastigma
ENSCPBG00000021101	RPUSD1	99	63.924	ENSOGAG00000003795	RPUSD1	99	66.667	Otolemur_garnettii
ENSCPBG00000021101	RPUSD1	99	66.447	ENSOARG00000014254	RPUSD1	99	66.343	Ovis_aries
ENSCPBG00000021101	RPUSD1	99	65.696	ENSPPAG00000034797	RPUSD1	99	65.696	Pan_paniscus
ENSCPBG00000021101	RPUSD1	99	65.574	ENSPPRG00000012389	RPUSD1	99	65.574	Panthera_pardus
ENSCPBG00000021101	RPUSD1	99	65.246	ENSPTIG00000008545	RPUSD1	78	81.553	Panthera_tigris_altaica
ENSCPBG00000021101	RPUSD1	99	65.696	ENSPTRG00000007565	RPUSD1	99	65.696	Pan_troglodytes
ENSCPBG00000021101	RPUSD1	99	65.696	ENSPANG00000024401	RPUSD1	92	76.667	Papio_anubis
ENSCPBG00000021101	RPUSD1	99	67.550	ENSPKIG00000018890	rpusd1	90	67.550	Paramormyrops_kingsleyae
ENSCPBG00000021101	RPUSD1	99	92.384	ENSPSIG00000013945	RPUSD1	99	92.384	Pelodiscus_sinensis
ENSCPBG00000021101	RPUSD1	99	61.667	ENSPMGG00000014950	rpusd1	98	62.252	Periophthalmus_magnuspinnatus
ENSCPBG00000021101	RPUSD1	99	66.118	ENSPEMG00000000497	Rpusd1	99	65.909	Peromyscus_maniculatus_bairdii
ENSCPBG00000021101	RPUSD1	85	56.977	ENSPMAG00000001563	rpusd1	99	52.090	Petromyzon_marinus
ENSCPBG00000021101	RPUSD1	99	75.497	ENSPCIG00000021216	-	93	75.497	Phascolarctos_cinereus
ENSCPBG00000021101	RPUSD1	99	63.455	ENSPFOG00000007946	rpusd1	98	63.455	Poecilia_formosa
ENSCPBG00000021101	RPUSD1	99	63.455	ENSPLAG00000011925	rpusd1	98	63.455	Poecilia_latipinna
ENSCPBG00000021101	RPUSD1	99	62.791	ENSPMEG00000002910	rpusd1	98	62.791	Poecilia_mexicana
ENSCPBG00000021101	RPUSD1	99	62.252	ENSPREG00000019851	rpusd1	98	62.252	Poecilia_reticulata
ENSCPBG00000021101	RPUSD1	99	50.820	ENSPCAG00000002258	RPUSD1	99	50.820	Procavia_capensis
ENSCPBG00000021101	RPUSD1	99	64.935	ENSPCOG00000022582	RPUSD1	99	64.935	Propithecus_coquereli
ENSCPBG00000021101	RPUSD1	99	61.635	ENSPVAG00000013104	RPUSD1	99	62.987	Pteropus_vampyrus
ENSCPBG00000021101	RPUSD1	99	62.092	ENSPNYG00000024076	rpusd1	98	62.092	Pundamilia_nyererei
ENSCPBG00000021101	RPUSD1	99	59.603	ENSPNAG00000013806	rpusd1	99	59.603	Pygocentrus_nattereri
ENSCPBG00000021101	RPUSD1	99	66.118	ENSRNOG00000023639	Rpusd1	99	66.447	Rattus_norvegicus
ENSCPBG00000021101	RPUSD1	99	65.696	ENSRBIG00000030238	RPUSD1	92	76.667	Rhinopithecus_bieti
ENSCPBG00000021101	RPUSD1	99	65.696	ENSRROG00000036663	RPUSD1	92	76.667	Rhinopithecus_roxellana
ENSCPBG00000021101	RPUSD1	99	64.474	ENSSBOG00000033063	RPUSD1	99	64.474	Saimiri_boliviensis_boliviensis
ENSCPBG00000021101	RPUSD1	99	74.503	ENSSHAG00000013500	RPUSD1	99	74.503	Sarcophilus_harrisii
ENSCPBG00000021101	RPUSD1	99	66.556	ENSSFOG00015014394	rpusd1	99	66.556	Scleropages_formosus
ENSCPBG00000021101	RPUSD1	99	60.855	ENSSMAG00000008045	rpusd1	91	61.513	Scophthalmus_maximus
ENSCPBG00000021101	RPUSD1	87	68.182	ENSSDUG00000001829	rpusd1	95	62.829	Seriola_dumerili
ENSCPBG00000021101	RPUSD1	87	68.182	ENSSLDG00000020853	rpusd1	95	62.829	Seriola_lalandi_dorsalis
ENSCPBG00000021101	RPUSD1	54	76.647	ENSSARG00000011187	-	100	76.647	Sorex_araneus
ENSCPBG00000021101	RPUSD1	63	78.010	ENSSPUG00000005119	-	99	78.010	Sphenodon_punctatus
ENSCPBG00000021101	RPUSD1	99	62.092	ENSSPAG00000012708	rpusd1	98	62.092	Stegastes_partitus
ENSCPBG00000021101	RPUSD1	99	64.935	ENSSSCG00000008000	RPUSD1	98	72.835	Sus_scrofa
ENSCPBG00000021101	RPUSD1	83	90.514	ENSTGUG00000015375	RPUSD1	100	90.514	Taeniopygia_guttata
ENSCPBG00000021101	RPUSD1	99	60.458	ENSTRUG00000003041	rpusd1	98	60.784	Takifugu_rubripes
ENSCPBG00000021101	RPUSD1	99	58.000	ENSTNIG00000002660	rpusd1	99	58.000	Tetraodon_nigroviridis
ENSCPBG00000021101	RPUSD1	99	65.909	ENSTTRG00000010167	RPUSD1	99	65.584	Tursiops_truncatus
ENSCPBG00000021101	RPUSD1	99	65.461	ENSUAMG00000012736	RPUSD1	99	65.789	Ursus_americanus
ENSCPBG00000021101	RPUSD1	99	65.902	ENSUMAG00000021174	RPUSD1	99	66.230	Ursus_maritimus
ENSCPBG00000021101	RPUSD1	99	66.447	ENSVVUG00000012357	RPUSD1	99	66.447	Vulpes_vulpes
ENSCPBG00000021101	RPUSD1	99	71.854	ENSXETG00000007184	rpusd1	99	71.854	Xenopus_tropicalis
ENSCPBG00000021101	RPUSD1	99	60.927	ENSXCOG00000017930	rpusd1	98	60.927	Xiphophorus_couchianus
ENSCPBG00000021101	RPUSD1	99	61.258	ENSXMAG00000024084	rpusd1	98	61.258	Xiphophorus_maculatus