EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000021186 (Gene tree)
Gene ID: 101947499
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 16321 bases
Position: chrKK082938.1:2842449-2858769
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000030086	zf-C2H2	PF00096.26	7.7e-29	1	5
ENSCPBP00000030086	zf-C2H2	PF00096.26	7.7e-29	2	5
ENSCPBP00000030086	zf-C2H2	PF00096.26	7.7e-29	3	5
ENSCPBP00000030086	zf-C2H2	PF00096.26	7.7e-29	4	5
ENSCPBP00000030086	zf-C2H2	PF00096.26	7.7e-29	5	5
ENSCPBP00000030086	zf-met	PF12874.7	9.7e-08	1	2
ENSCPBP00000030086	zf-met	PF12874.7	9.7e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000035418	GFI1B-201	3493	-	ENSCPBP00000030086	342 (aa)	XP_008167341	UPI00046C2A31

Gene Model

Click here to download ENSCPBG00000021186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000021186	GFI1B	54	38.182	ENSCPBG00000004296	ZBTB47	77	38.182
ENSCPBG00000021186	GFI1B	51	39.640	ENSCPBG00000004542	ZNF865	72	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021186	GFI1B	100	59.012	ENSAPOG00000001296	gfi1b	100	59.012	Acanthochromis_polyacanthus
ENSCPBG00000021186	GFI1B	65	73.214	ENSACIG00000002190	gfi1b	73	73.214	Amphilophus_citrinellus
ENSCPBG00000021186	GFI1B	100	59.302	ENSAOCG00000021187	gfi1b	100	59.302	Amphiprion_ocellaris
ENSCPBG00000021186	GFI1B	100	59.884	ENSAPEG00000016196	gfi1b	100	59.884	Amphiprion_percula
ENSCPBG00000021186	GFI1B	100	58.841	ENSATEG00000002534	gfi1b	100	58.841	Anabas_testudineus
ENSCPBG00000021186	GFI1B	100	80.702	ENSAPLG00000003373	GFI1B	100	80.702	Anas_platyrhynchos
ENSCPBG00000021186	GFI1B	100	55.682	ENSACLG00000027053	gfi1b	100	55.682	Astatotilapia_calliptera
ENSCPBG00000021186	GFI1B	100	59.429	ENSAMXG00000037544	GFI1B	100	59.429	Astyanax_mexicanus
ENSCPBG00000021186	GFI1B	100	68.786	ENSCAPG00000010404	GFI1B	100	68.786	Cavia_aperea
ENSCPBG00000021186	GFI1B	100	56.647	ENSCSEG00000001315	gfi1b	100	56.647	Cynoglossus_semilaevis
ENSCPBG00000021186	GFI1B	100	57.558	ENSCVAG00000017168	gfi1b	100	57.558	Cyprinodon_variegatus
ENSCPBG00000021186	GFI1B	100	60.511	ENSDARG00000079947	gfi1b	97	78.448	Danio_rerio
ENSCPBG00000021186	GFI1B	66	57.965	ENSEEUG00000012609	-	100	57.965	Erinaceus_europaeus
ENSCPBG00000021186	GFI1B	100	61.272	ENSELUG00000016933	gfi1b	100	61.272	Esox_lucius
ENSCPBG00000021186	GFI1B	100	74.324	ENSFALG00000001479	GFI1B	100	74.324	Ficedula_albicollis
ENSCPBG00000021186	GFI1B	100	58.092	ENSFHEG00000015138	gfi1b	100	58.092	Fundulus_heteroclitus
ENSCPBG00000021186	GFI1B	67	77.253	ENSGMOG00000019123	gfi1b	87	77.253	Gadus_morhua
ENSCPBG00000021186	GFI1B	100	80.994	ENSGALG00000003478	GFI1B	100	80.994	Gallus_gallus
ENSCPBG00000021186	GFI1B	67	75.000	ENSGAFG00000003059	gfi1b	98	75.000	Gambusia_affinis
ENSCPBG00000021186	GFI1B	100	57.865	ENSGACG00000018134	gfi1b	100	57.865	Gasterosteus_aculeatus
ENSCPBG00000021186	GFI1B	100	94.152	ENSGAGG00000021327	GFI1B	100	94.152	Gopherus_agassizii
ENSCPBG00000021186	GFI1B	100	55.682	ENSHBUG00000005451	gfi1b	100	55.682	Haplochromis_burtoni
ENSCPBG00000021186	GFI1B	100	57.267	ENSHCOG00000013713	gfi1b	100	58.140	Hippocampus_comes
ENSCPBG00000021186	GFI1B	100	61.494	ENSIPUG00000012769	gfi1b	100	61.494	Ictalurus_punctatus
ENSCPBG00000021186	GFI1B	99	64.567	ENSJJAG00000016355	Gfi1b	100	64.567	Jaculus_jaculus
ENSCPBG00000021186	GFI1B	100	59.078	ENSKMAG00000016047	gfi1b	100	59.078	Kryptolebias_marmoratus
ENSCPBG00000021186	GFI1B	100	58.721	ENSLBEG00000020297	gfi1b	99	59.654	Labrus_bergylta
ENSCPBG00000021186	GFI1B	100	65.797	ENSLACG00000012207	GFI1B	100	65.797	Latimeria_chalumnae
ENSCPBG00000021186	GFI1B	100	59.143	ENSLOCG00000005750	gfi1b	100	59.143	Lepisosteus_oculatus
ENSCPBG00000021186	GFI1B	100	69.186	ENSLAFG00000022367	GFI1B	100	69.186	Loxodonta_africana
ENSCPBG00000021186	GFI1B	100	59.538	ENSMAMG00000003040	gfi1b	100	59.538	Mastacembelus_armatus
ENSCPBG00000021186	GFI1B	99	55.840	ENSMZEG00005015594	gfi1b	99	55.840	Maylandia_zebra
ENSCPBG00000021186	GFI1B	100	80.702	ENSMGAG00000006129	GFI1B	100	80.702	Meleagris_gallopavo
ENSCPBG00000021186	GFI1B	100	59.593	ENSMMOG00000011764	gfi1b	100	59.593	Mola_mola
ENSCPBG00000021186	GFI1B	100	63.733	ENSMODG00000012600	GFI1B	100	63.733	Monodelphis_domestica
ENSCPBG00000021186	GFI1B	100	57.880	ENSMALG00000004034	gfi1b	100	57.880	Monopterus_albus
ENSCPBG00000021186	GFI1B	99	68.023	ENSNGAG00000003333	Gfi1b	100	68.023	Nannospalax_galili
ENSCPBG00000021186	GFI1B	100	55.652	ENSNBRG00000012391	gfi1b	100	55.652	Neolamprologus_brichardi
ENSCPBG00000021186	GFI1B	100	55.271	ENSONIG00000013011	gfi1b	100	82.682	Oreochromis_niloticus
ENSCPBG00000021186	GFI1B	100	72.222	ENSOANG00000014723	GFI1B	100	72.222	Ornithorhynchus_anatinus
ENSCPBG00000021186	GFI1B	100	44.092	ENSORLG00000014390	GFI1B	96	48.814	Oryzias_latipes
ENSCPBG00000021186	GFI1B	100	56.772	ENSORLG00020003719	GFI1B	100	56.772	Oryzias_latipes_hni
ENSCPBG00000021186	GFI1B	100	55.908	ENSORLG00015017142	gfi1b	100	55.908	Oryzias_latipes_hsok
ENSCPBG00000021186	GFI1B	100	56.686	ENSOMEG00000015149	GFI1B	100	56.686	Oryzias_melastigma
ENSCPBG00000021186	GFI1B	100	67.241	ENSOGAG00000008879	GFI1B	100	67.529	Otolemur_garnettii
ENSCPBG00000021186	GFI1B	100	61.281	ENSPKIG00000007643	gfi1b	100	61.281	Paramormyrops_kingsleyae
ENSCPBG00000021186	GFI1B	100	93.567	ENSPSIG00000012112	GFI1B	100	93.567	Pelodiscus_sinensis
ENSCPBG00000021186	GFI1B	67	72.996	ENSPMGG00000006021	gfi1b	75	72.996	Periophthalmus_magnuspinnatus
ENSCPBG00000021186	GFI1B	100	63.926	ENSPCIG00000019724	GFI1B	100	63.926	Phascolarctos_cinereus
ENSCPBG00000021186	GFI1B	100	58.166	ENSPFOG00000003460	gfi1b	100	58.166	Poecilia_formosa
ENSCPBG00000021186	GFI1B	100	59.130	ENSPLAG00000021960	GFI1B	100	59.130	Poecilia_latipinna
ENSCPBG00000021186	GFI1B	100	58.166	ENSPLAG00000017181	GFI1B	100	58.166	Poecilia_latipinna
ENSCPBG00000021186	GFI1B	100	59.130	ENSPMEG00000001556	GFI1B	100	59.130	Poecilia_mexicana
ENSCPBG00000021186	GFI1B	100	59.130	ENSPMEG00000019220	gfi1b	100	59.130	Poecilia_mexicana
ENSCPBG00000021186	GFI1B	100	59.130	ENSPREG00000021718	gfi1b	100	59.130	Poecilia_reticulata
ENSCPBG00000021186	GFI1B	65	73.333	ENSPNYG00000018422	gfi1b	70	73.333	Pundamilia_nyererei
ENSCPBG00000021186	GFI1B	100	59.483	ENSPNAG00000021118	gfi1b	100	59.483	Pygocentrus_nattereri
ENSCPBG00000021186	GFI1B	100	57.560	ENSSHAG00000006462	GFI1B	100	57.560	Sarcophilus_harrisii
ENSCPBG00000021186	GFI1B	84	54.276	ENSSFOG00015011566	gfi1b	90	54.276	Scleropages_formosus
ENSCPBG00000021186	GFI1B	99	58.430	ENSSMAG00000015181	gfi1b	99	58.430	Scophthalmus_maximus
ENSCPBG00000021186	GFI1B	100	59.654	ENSSDUG00000011604	gfi1b	100	59.654	Seriola_dumerili
ENSCPBG00000021186	GFI1B	100	59.483	ENSSLDG00000013823	gfi1b	100	59.483	Seriola_lalandi_dorsalis
ENSCPBG00000021186	GFI1B	100	68.208	ENSSPUG00000016039	GFI1B	100	68.208	Sphenodon_punctatus
ENSCPBG00000021186	GFI1B	100	58.721	ENSSPAG00000022914	gfi1b	100	58.721	Stegastes_partitus
ENSCPBG00000021186	GFI1B	50	100.000	ENSTGUG00000005282	-	100	100.000	Taeniopygia_guttata
ENSCPBG00000021186	GFI1B	100	57.307	ENSTRUG00000004525	gfi1b	100	57.307	Takifugu_rubripes
ENSCPBG00000021186	GFI1B	100	56.936	ENSTNIG00000003834	gfi1b	100	56.936	Tetraodon_nigroviridis
ENSCPBG00000021186	GFI1B	100	53.448	ENSTBEG00000014459	GFI1B	100	53.448	Tupaia_belangeri
ENSCPBG00000021186	GFI1B	100	60.623	ENSXETG00000006263	gfi1b	100	61.272	Xenopus_tropicalis
ENSCPBG00000021186	GFI1B	100	60.000	ENSXMAG00000027589	gfi1b	100	60.000	Xiphophorus_maculatus