EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000021221 (Gene tree)
Gene ID: 101935771
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 171205 bases
Position: chrKK088198.1:13932698-14103902
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000030130	Nucleoplasmin	PF03066.15	9.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000035468	-	1803	-	ENSCPBP00000030130	492 (aa)	-	-
ENSCPBT00000035470	-	920	-	ENSCPBP00000030132	207 (aa)	XP_008177809	UPI00046C372A

Gene Model

Click here to download ENSCPBG00000021221's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic04010	MAPK signaling pathway	KEGG
cpic04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021221	-	58	48.980	ENSAPOG00000004268	npm1b	96	47.138	Acanthochromis_polyacanthus
ENSCPBG00000021221	-	58	47.766	ENSAOCG00000012549	npm1b	96	45.918	Amphiprion_ocellaris
ENSCPBG00000021221	-	58	48.264	ENSAPEG00000000868	npm1b	96	46.392	Amphiprion_percula
ENSCPBG00000021221	-	58	45.455	ENSATEG00000006254	npm1b	96	44.000	Anabas_testudineus
ENSCPBG00000021221	-	60	75.083	ENSACAG00000015626	-	100	74.751	Anolis_carolinensis
ENSCPBG00000021221	-	58	44.178	ENSAMXG00000042148	npm1b	97	43.836	Astyanax_mexicanus
ENSCPBG00000021221	-	53	47.328	ENSCAFG00000023359	-	100	47.328	Canis_familiaris
ENSCPBG00000021221	-	60	45.246	ENSCSEG00000004530	npm1b	96	44.932	Cynoglossus_semilaevis
ENSCPBG00000021221	-	60	46.602	ENSCVAG00000013016	npm1b	98	44.728	Cyprinodon_variegatus
ENSCPBG00000021221	-	60	44.444	ENSDARG00000037675	npm1b	96	46.075	Danio_rerio
ENSCPBG00000021221	-	58	42.761	ENSELUG00000022123	npm1b	95	41.414	Esox_lucius
ENSCPBG00000021221	-	57	75.445	ENSFALG00000003320	-	96	74.386	Ficedula_albicollis
ENSCPBG00000021221	-	60	45.955	ENSFHEG00000020794	npm1b	98	44.984	Fundulus_heteroclitus
ENSCPBG00000021221	-	60	44.904	ENSGMOG00000002689	npm1b	100	44.127	Gadus_morhua
ENSCPBG00000021221	-	60	77.517	ENSGALG00000002197	-	73	77.517	Gallus_gallus
ENSCPBG00000021221	-	60	42.810	ENSGAFG00000017709	npm1b	98	42.071	Gambusia_affinis
ENSCPBG00000021221	-	58	44.056	ENSGACG00000016706	npm1b	97	44.251	Gasterosteus_aculeatus
ENSCPBG00000021221	-	60	93.939	ENSGAGG00000020250	-	100	93.603	Gopherus_agassizii
ENSCPBG00000021221	-	60	42.157	ENSHBUG00000019903	npm1b	93	43.730	Haplochromis_burtoni
ENSCPBG00000021221	-	58	45.392	ENSHCOG00000003895	npm1b	96	44.932	Hippocampus_comes
ENSCPBG00000021221	-	58	43.729	ENSIPUG00000020165	npm1b	96	43.878	Ictalurus_punctatus
ENSCPBG00000021221	-	58	44.369	ENSKMAG00000008260	npm1b	96	44.898	Kryptolebias_marmoratus
ENSCPBG00000021221	-	60	50.671	ENSLACG00000013460	-	100	51.515	Latimeria_chalumnae
ENSCPBG00000021221	-	54	43.972	ENSLACG00000001779	-	99	43.617	Latimeria_chalumnae
ENSCPBG00000021221	-	56	37.624	ENSLOCG00000001942	npm1b	99	37.624	Lepisosteus_oculatus
ENSCPBG00000021221	-	56	76.534	ENSMGAG00000001591	-	100	76.534	Meleagris_gallopavo
ENSCPBG00000021221	-	60	42.295	ENSONIG00000001397	npm1b	98	40.461	Oreochromis_niloticus
ENSCPBG00000021221	-	57	39.649	ENSOMEG00000003414	npm1b	97	38.356	Oryzias_melastigma
ENSCPBG00000021221	-	58	45.545	ENSPKIG00000020050	npm1b	95	45.545	Paramormyrops_kingsleyae
ENSCPBG00000021221	-	58	87.413	ENSPSIG00000011204	-	92	89.362	Pelodiscus_sinensis
ENSCPBG00000021221	-	56	40.925	ENSPMAG00000004930	npm1b	99	40.569	Petromyzon_marinus
ENSCPBG00000021221	-	60	44.660	ENSPFOG00000018357	npm1b	98	43.689	Poecilia_formosa
ENSCPBG00000021221	-	58	45.862	ENSPNAG00000005498	npm1b	96	45.862	Pygocentrus_nattereri
ENSCPBG00000021221	-	58	40.767	ENSSFOG00015005064	npm1b	97	40.767	Scleropages_formosus
ENSCPBG00000021221	-	60	44.702	ENSSMAG00000008088	npm1b	99	43.934	Scophthalmus_maximus
ENSCPBG00000021221	-	58	48.311	ENSSDUG00000007726	npm1b	96	46.154	Seriola_dumerili
ENSCPBG00000021221	-	58	48.649	ENSSLDG00000021396	npm1b	96	46.488	Seriola_lalandi_dorsalis
ENSCPBG00000021221	-	58	44.863	ENSSPAG00000011152	npm1b	96	43.390	Stegastes_partitus
ENSCPBG00000021221	-	56	75.357	ENSTGUG00000014970	-	100	73.929	Taeniopygia_guttata
ENSCPBG00000021221	-	58	46.918	ENSTRUG00000008105	npm1b	92	45.424	Takifugu_rubripes
ENSCPBG00000021221	-	58	44.863	ENSTNIG00000013057	npm1b	97	44.068	Tetraodon_nigroviridis
ENSCPBG00000021221	-	60	64.333	ENSXETG00000008403	npm1	99	64.333	Xenopus_tropicalis
ENSCPBG00000021221	-	60	43.322	ENSXMAG00000001986	npm1b	98	44.194	Xiphophorus_maculatus