EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000021317 (Gene tree)
Gene ID: -
Gene Symbol: LSM7
Alias: YNL147W
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 6268 bases
Position: chr22:1297268-1303535
Accession: 20470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000030295	LSM	PF01423.22	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000035657	LSM7-201	536	-	ENSCPBP00000030295	94 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000021317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021317	LSM7	77	94.444	ENSG00000130332	LSM7	100	95.918	Homo_sapiens
ENSCPBG00000021317	LSM7	69	96.923	ENSAPOG00000015573	lsm7	56	96.923	Acanthochromis_polyacanthus
ENSCPBG00000021317	LSM7	77	93.056	ENSAMEG00000005484	LSM7	70	93.056	Ailuropoda_melanoleuca
ENSCPBG00000021317	LSM7	72	97.059	ENSACIG00000006498	lsm7	54	97.059	Amphilophus_citrinellus
ENSCPBG00000021317	LSM7	76	97.183	ENSAOCG00000001077	lsm7	65	95.833	Amphiprion_ocellaris
ENSCPBG00000021317	LSM7	77	95.833	ENSAPEG00000000694	lsm7	70	95.833	Amphiprion_percula
ENSCPBG00000021317	LSM7	76	97.183	ENSAPEG00000024447	lsm7	65	95.833	Amphiprion_percula
ENSCPBG00000021317	LSM7	77	95.833	ENSATEG00000008557	lsm7	70	95.833	Anabas_testudineus
ENSCPBG00000021317	LSM7	77	81.944	ENSANAG00000022222	-	68	81.944	Aotus_nancymaae
ENSCPBG00000021317	LSM7	77	94.444	ENSANAG00000037196	-	70	94.444	Aotus_nancymaae
ENSCPBG00000021317	LSM7	77	95.833	ENSACLG00000021021	lsm7	70	95.833	Astatotilapia_calliptera
ENSCPBG00000021317	LSM7	78	94.521	ENSAMXG00000037622	lsm7	71	94.521	Astyanax_mexicanus
ENSCPBG00000021317	LSM7	77	94.444	ENSBTAG00000004521	LSM7	70	94.444	Bos_taurus
ENSCPBG00000021317	LSM7	76	54.930	WBGene00003081	lsm-7	68	54.930	Caenorhabditis_elegans
ENSCPBG00000021317	LSM7	77	93.056	ENSCAFG00000019409	LSM7	70	93.056	Canis_familiaris
ENSCPBG00000021317	LSM7	76	94.366	ENSCAFG00020018168	LSM7	51	95.714	Canis_lupus_dingo
ENSCPBG00000021317	LSM7	77	94.444	ENSCHIG00000023663	LSM7	70	94.444	Capra_hircus
ENSCPBG00000021317	LSM7	76	95.775	ENSCAPG00000014534	LSM7	100	95.775	Cavia_aperea
ENSCPBG00000021317	LSM7	77	94.444	ENSCPOG00000014025	LSM7	71	94.444	Cavia_porcellus
ENSCPBG00000021317	LSM7	77	94.444	ENSCCAG00000035456	LSM7	71	94.444	Cebus_capucinus
ENSCPBG00000021317	LSM7	77	94.444	ENSCATG00000023543	LSM7	70	94.444	Cercocebus_atys
ENSCPBG00000021317	LSM7	77	94.444	ENSCLAG00000011635	LSM7	70	94.444	Chinchilla_lanigera
ENSCPBG00000021317	LSM7	77	94.444	ENSCSAG00000011599	LSM7	70	94.444	Chlorocebus_sabaeus
ENSCPBG00000021317	LSM7	73	81.159	ENSCING00000022134	-	69	82.353	Ciona_intestinalis
ENSCPBG00000021317	LSM7	77	94.444	ENSCANG00000035525	LSM7	70	94.444	Colobus_angolensis_palliatus
ENSCPBG00000021317	LSM7	77	93.056	ENSCGRG00001000807	-	70	93.056	Cricetulus_griseus_chok1gshd
ENSCPBG00000021317	LSM7	65	85.246	ENSCGRG00001016005	-	61	85.246	Cricetulus_griseus_chok1gshd
ENSCPBG00000021317	LSM7	76	94.366	ENSCGRG00000014355	-	69	93.056	Cricetulus_griseus_crigri
ENSCPBG00000021317	LSM7	65	85.246	ENSCGRG00000006821	-	61	85.246	Cricetulus_griseus_crigri
ENSCPBG00000021317	LSM7	77	95.833	ENSCSEG00000014900	lsm7	61	95.833	Cynoglossus_semilaevis
ENSCPBG00000021317	LSM7	77	95.833	ENSCVAG00000021091	lsm7	67	95.833	Cyprinodon_variegatus
ENSCPBG00000021317	LSM7	77	97.222	ENSDARG00000058328	lsm7	70	97.222	Danio_rerio
ENSCPBG00000021317	LSM7	77	94.444	ENSDORG00000024460	Lsm7	71	94.444	Dipodomys_ordii
ENSCPBG00000021317	LSM7	73	72.857	FBgn0261068	LSm7	63	73.913	Drosophila_melanogaster
ENSCPBG00000021317	LSM7	73	97.101	ENSETEG00000012788	LSM7	68	97.101	Echinops_telfairi
ENSCPBG00000021317	LSM7	78	82.192	ENSEBUG00000016992	lsm7	69	83.333	Eptatretus_burgeri
ENSCPBG00000021317	LSM7	69	63.077	ENSEBUG00000010470	-	61	63.077	Eptatretus_burgeri
ENSCPBG00000021317	LSM7	77	93.056	ENSFCAG00000003445	LSM7	70	93.056	Felis_catus
ENSCPBG00000021317	LSM7	77	95.833	ENSFALG00000011912	LSM7	71	95.833	Ficedula_albicollis
ENSCPBG00000021317	LSM7	77	94.444	ENSFDAG00000007661	LSM7	75	94.444	Fukomys_damarensis
ENSCPBG00000021317	LSM7	77	95.833	ENSFHEG00000006349	lsm7	64	95.833	Fundulus_heteroclitus
ENSCPBG00000021317	LSM7	77	93.056	ENSGMOG00000013320	lsm7	70	93.056	Gadus_morhua
ENSCPBG00000021317	LSM7	77	95.833	ENSGAFG00000013902	lsm7	70	95.833	Gambusia_affinis
ENSCPBG00000021317	LSM7	77	94.444	ENSGACG00000010390	lsm7	70	94.444	Gasterosteus_aculeatus
ENSCPBG00000021317	LSM7	77	94.444	ENSGGOG00000010172	LSM7	70	94.444	Gorilla_gorilla
ENSCPBG00000021317	LSM7	77	95.833	ENSHBUG00000004616	lsm7	70	95.833	Haplochromis_burtoni
ENSCPBG00000021317	LSM7	77	94.444	ENSHGLG00000010587	LSM7	70	94.444	Heterocephalus_glaber_female
ENSCPBG00000021317	LSM7	77	94.444	ENSHGLG00100000852	LSM7	70	94.444	Heterocephalus_glaber_male
ENSCPBG00000021317	LSM7	77	95.833	ENSHCOG00000020252	lsm7	71	95.833	Hippocampus_comes
ENSCPBG00000021317	LSM7	77	94.444	ENSIPUG00000024724	lsm7	70	94.444	Ictalurus_punctatus
ENSCPBG00000021317	LSM7	77	94.444	ENSSTOG00000028372	LSM7	71	94.444	Ictidomys_tridecemlineatus
ENSCPBG00000021317	LSM7	76	94.366	ENSJJAG00000001936	Lsm7	69	94.366	Jaculus_jaculus
ENSCPBG00000021317	LSM7	77	95.833	ENSKMAG00000022151	lsm7	70	95.833	Kryptolebias_marmoratus
ENSCPBG00000021317	LSM7	77	95.833	ENSLBEG00000005203	lsm7	70	95.833	Labrus_bergylta
ENSCPBG00000021317	LSM7	77	95.833	ENSLACG00000015700	LSM7	70	95.833	Latimeria_chalumnae
ENSCPBG00000021317	LSM7	77	95.833	ENSLOCG00000004356	lsm7	70	95.833	Lepisosteus_oculatus
ENSCPBG00000021317	LSM7	77	94.444	ENSLAFG00000029302	LSM7	70	94.444	Loxodonta_africana
ENSCPBG00000021317	LSM7	77	94.444	ENSMFAG00000044572	LSM7	70	94.444	Macaca_fascicularis
ENSCPBG00000021317	LSM7	77	94.444	ENSMMUG00000000452	LSM7	71	94.444	Macaca_mulatta
ENSCPBG00000021317	LSM7	77	94.444	ENSMNEG00000004393	LSM7	70	94.444	Macaca_nemestrina
ENSCPBG00000021317	LSM7	77	94.444	ENSMLEG00000030852	LSM7	71	94.444	Mandrillus_leucophaeus
ENSCPBG00000021317	LSM7	77	95.833	ENSMAMG00000005410	lsm7	70	95.833	Mastacembelus_armatus
ENSCPBG00000021317	LSM7	77	95.833	ENSMZEG00005028055	lsm7	70	95.833	Maylandia_zebra
ENSCPBG00000021317	LSM7	77	97.222	ENSMGAG00000000750	LSM7	62	97.222	Meleagris_gallopavo
ENSCPBG00000021317	LSM7	77	93.056	ENSMAUG00000009276	Lsm7	70	93.056	Mesocricetus_auratus
ENSCPBG00000021317	LSM7	77	94.444	ENSMICG00000009988	-	70	94.444	Microcebus_murinus
ENSCPBG00000021317	LSM7	77	94.444	ENSMICG00000028619	-	70	94.444	Microcebus_murinus
ENSCPBG00000021317	LSM7	77	93.056	ENSMOCG00000016925	Lsm7	70	93.056	Microtus_ochrogaster
ENSCPBG00000021317	LSM7	77	95.833	ENSMMOG00000019645	lsm7	69	95.833	Mola_mola
ENSCPBG00000021317	LSM7	77	95.833	ENSMODG00000004722	LSM7	70	95.833	Monodelphis_domestica
ENSCPBG00000021317	LSM7	77	95.833	ENSMALG00000014511	lsm7	55	95.833	Monopterus_albus
ENSCPBG00000021317	LSM7	76	92.958	MGP_CAROLIEiJ_G0015607	Lsm7	69	92.958	Mus_caroli
ENSCPBG00000021317	LSM7	76	92.958	ENSMUSG00000035215	Lsm7	69	92.958	Mus_musculus
ENSCPBG00000021317	LSM7	76	92.958	MGP_PahariEiJ_G0031020	Lsm7	69	92.958	Mus_pahari
ENSCPBG00000021317	LSM7	76	92.958	MGP_SPRETEiJ_G0016425	Lsm7	69	92.958	Mus_spretus
ENSCPBG00000021317	LSM7	76	91.549	ENSMLUG00000024002	-	66	91.549	Myotis_lucifugus
ENSCPBG00000021317	LSM7	77	95.833	ENSMLUG00000013097	-	70	95.833	Myotis_lucifugus
ENSCPBG00000021317	LSM7	77	91.667	ENSNGAG00000021637	Lsm7	70	91.667	Nannospalax_galili
ENSCPBG00000021317	LSM7	77	95.833	ENSNBRG00000015770	lsm7	62	95.833	Neolamprologus_brichardi
ENSCPBG00000021317	LSM7	77	95.833	ENSNBRG00000001237	-	58	95.833	Neolamprologus_brichardi
ENSCPBG00000021317	LSM7	77	94.444	ENSNLEG00000002265	LSM7	70	94.444	Nomascus_leucogenys
ENSCPBG00000021317	LSM7	74	84.286	ENSODEG00000008190	-	74	84.286	Octodon_degus
ENSCPBG00000021317	LSM7	77	94.444	ENSODEG00000013590	-	70	94.444	Octodon_degus
ENSCPBG00000021317	LSM7	77	87.500	ENSODEG00000018769	-	70	87.500	Octodon_degus
ENSCPBG00000021317	LSM7	77	95.833	ENSONIG00000001801	lsm7	62	95.833	Oreochromis_niloticus
ENSCPBG00000021317	LSM7	73	97.101	ENSOANG00000009196	-	50	94.521	Ornithorhynchus_anatinus
ENSCPBG00000021317	LSM7	77	95.833	ENSORLG00000023951	lsm7	70	95.833	Oryzias_latipes
ENSCPBG00000021317	LSM7	77	95.833	ENSORLG00020022226	lsm7	70	95.833	Oryzias_latipes_hni
ENSCPBG00000021317	LSM7	77	95.833	ENSORLG00015020044	lsm7	67	95.833	Oryzias_latipes_hsok
ENSCPBG00000021317	LSM7	77	95.833	ENSOMEG00000012806	lsm7	70	95.833	Oryzias_melastigma
ENSCPBG00000021317	LSM7	77	91.667	ENSOGAG00000000144	-	71	91.667	Otolemur_garnettii
ENSCPBG00000021317	LSM7	77	80.556	ENSOGAG00000024373	-	71	80.556	Otolemur_garnettii
ENSCPBG00000021317	LSM7	77	94.444	ENSOARG00000014013	LSM7	70	94.444	Ovis_aries
ENSCPBG00000021317	LSM7	77	94.444	ENSPPAG00000026500	LSM7	70	94.444	Pan_paniscus
ENSCPBG00000021317	LSM7	77	93.056	ENSPPRG00000008624	LSM7	70	93.056	Panthera_pardus
ENSCPBG00000021317	LSM7	77	93.056	ENSPTIG00000016252	LSM7	70	93.056	Panthera_tigris_altaica
ENSCPBG00000021317	LSM7	77	94.444	ENSPTRG00000010233	LSM7	70	94.444	Pan_troglodytes
ENSCPBG00000021317	LSM7	77	94.444	ENSPANG00000020668	LSM7	70	94.444	Papio_anubis
ENSCPBG00000021317	LSM7	77	97.222	ENSPKIG00000011325	lsm7	70	97.222	Paramormyrops_kingsleyae
ENSCPBG00000021317	LSM7	77	97.222	ENSPSIG00000017149	LSM7	63	97.222	Pelodiscus_sinensis
ENSCPBG00000021317	LSM7	77	95.833	ENSPMGG00000006498	lsm7	70	95.833	Periophthalmus_magnuspinnatus
ENSCPBG00000021317	LSM7	77	95.833	ENSPCIG00000030454	LSM7	71	95.833	Phascolarctos_cinereus
ENSCPBG00000021317	LSM7	77	94.444	ENSPFOG00000012467	lsm7	64	94.444	Poecilia_formosa
ENSCPBG00000021317	LSM7	77	94.444	ENSPLAG00000000252	lsm7	67	94.444	Poecilia_latipinna
ENSCPBG00000021317	LSM7	77	94.444	ENSPMEG00000000587	lsm7	67	94.444	Poecilia_mexicana
ENSCPBG00000021317	LSM7	77	94.444	ENSPCOG00000017177	LSM7	71	94.444	Propithecus_coquereli
ENSCPBG00000021317	LSM7	77	95.833	ENSPNYG00000006938	lsm7	70	95.833	Pundamilia_nyererei
ENSCPBG00000021317	LSM7	78	94.521	ENSPNAG00000010141	lsm7	72	94.521	Pygocentrus_nattereri
ENSCPBG00000021317	LSM7	76	94.366	ENSRNOG00000019552	Lsm7	69	94.366	Rattus_norvegicus
ENSCPBG00000021317	LSM7	77	94.444	ENSRBIG00000035978	LSM7	70	94.444	Rhinopithecus_bieti
ENSCPBG00000021317	LSM7	77	94.444	ENSRROG00000034044	LSM7	70	94.444	Rhinopithecus_roxellana
ENSCPBG00000021317	LSM7	63	46.774	YNL147W	-	54	46.774	Saccharomyces_cerevisiae
ENSCPBG00000021317	LSM7	77	94.444	ENSSBOG00000034899	LSM7	70	94.444	Saimiri_boliviensis_boliviensis
ENSCPBG00000021317	LSM7	79	93.243	ENSSFOG00015006728	lsm7	70	94.444	Scleropages_formosus
ENSCPBG00000021317	LSM7	77	95.833	ENSSMAG00000004195	lsm7	66	95.833	Scophthalmus_maximus
ENSCPBG00000021317	LSM7	77	95.833	ENSSDUG00000001863	lsm7	70	95.833	Seriola_dumerili
ENSCPBG00000021317	LSM7	77	95.833	ENSSLDG00000016339	lsm7	70	95.833	Seriola_lalandi_dorsalis
ENSCPBG00000021317	LSM7	77	95.833	ENSSPAG00000015221	lsm7	70	95.833	Stegastes_partitus
ENSCPBG00000021317	LSM7	77	94.444	ENSSSCG00000013463	LSM7	71	94.444	Sus_scrofa
ENSCPBG00000021317	LSM7	77	95.833	ENSTGUG00000000067	LSM7	71	95.833	Taeniopygia_guttata
ENSCPBG00000021317	LSM7	77	95.833	ENSTRUG00000022913	lsm7	70	95.833	Takifugu_rubripes
ENSCPBG00000021317	LSM7	77	95.833	ENSTNIG00000015525	lsm7	70	95.833	Tetraodon_nigroviridis
ENSCPBG00000021317	LSM7	74	82.857	ENSTBEG00000016602	LSM7	100	82.857	Tupaia_belangeri
ENSCPBG00000021317	LSM7	77	93.056	ENSUAMG00000000912	LSM7	60	93.056	Ursus_americanus
ENSCPBG00000021317	LSM7	76	94.366	ENSUMAG00000006556	LSM7	55	94.366	Ursus_maritimus
ENSCPBG00000021317	LSM7	80	89.333	ENSVVUG00000002640	LSM7	67	91.781	Vulpes_vulpes
ENSCPBG00000021317	LSM7	77	97.222	ENSXETG00000022166	lsm7	71	97.222	Xenopus_tropicalis
ENSCPBG00000021317	LSM7	77	95.833	ENSXCOG00000002572	lsm7	71	95.833	Xiphophorus_couchianus
ENSCPBG00000021317	LSM7	77	95.833	ENSXMAG00000018630	lsm7	70	95.833	Xiphophorus_maculatus