EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000021487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 6188 bases
Position: chrKK083415.1:288221-294408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000030515	zf-C2H2	PF00096.26	3.3e-38	1	6
ENSCPBP00000030515	zf-C2H2	PF00096.26	3.3e-38	2	6
ENSCPBP00000030515	zf-C2H2	PF00096.26	3.3e-38	3	6
ENSCPBP00000030515	zf-C2H2	PF00096.26	3.3e-38	4	6
ENSCPBP00000030515	zf-C2H2	PF00096.26	3.3e-38	5	6
ENSCPBP00000030515	zf-C2H2	PF00096.26	3.3e-38	6	6
ENSCPBP00000030515	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000035923	-	1131	-	ENSCPBP00000030515	376 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000021487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000021487	-	71	51.613	ENSCPBG00000015987	-	71	51.613
ENSCPBG00000021487	-	99	59.712	ENSCPBG00000015500	-	99	62.406
ENSCPBG00000021487	-	85	41.296	ENSCPBG00000008580	-	89	39.456
ENSCPBG00000021487	-	95	61.654	ENSCPBG00000004990	-	100	61.847
ENSCPBG00000021487	-	73	46.907	ENSCPBG00000009849	-	88	46.907
ENSCPBG00000021487	-	93	57.143	ENSCPBG00000002430	-	97	61.029
ENSCPBG00000021487	-	64	51.579	ENSCPBG00000002014	-	58	49.770
ENSCPBG00000021487	-	96	67.399	ENSCPBG00000017494	-	99	67.042
ENSCPBG00000021487	-	95	61.053	ENSCPBG00000001421	-	98	62.632
ENSCPBG00000021487	-	73	49.813	ENSCPBG00000005586	-	61	49.813
ENSCPBG00000021487	-	95	76.923	ENSCPBG00000012976	-	89	76.923
ENSCPBG00000021487	-	94	57.714	ENSCPBG00000026433	-	82	57.714
ENSCPBG00000021487	-	80	51.546	ENSCPBG00000009609	-	93	50.545
ENSCPBG00000021487	-	96	59.559	ENSCPBG00000001181	-	99	59.559
ENSCPBG00000021487	-	75	45.729	ENSCPBG00000005715	ZBTB49	56	42.063
ENSCPBG00000021487	-	93	55.986	ENSCPBG00000021479	-	98	55.219
ENSCPBG00000021487	-	94	86.538	ENSCPBG00000003774	-	85	86.538
ENSCPBG00000021487	-	74	49.115	ENSCPBG00000001526	-	79	49.115
ENSCPBG00000021487	-	69	53.125	ENSCPBG00000002063	-	54	53.125
ENSCPBG00000021487	-	69	54.872	ENSCPBG00000001258	-	99	54.872
ENSCPBG00000021487	-	93	62.844	ENSCPBG00000003130	-	98	62.791
ENSCPBG00000021487	-	68	38.942	ENSCPBG00000004542	ZNF865	72	38.942
ENSCPBG00000021487	-	97	57.051	ENSCPBG00000016841	-	99	58.456
ENSCPBG00000021487	-	93	61.029	ENSCPBG00000004030	-	100	58.803
ENSCPBG00000021487	-	75	38.961	ENSCPBG00000024735	PRDM5	72	38.961
ENSCPBG00000021487	-	70	38.686	ENSCPBG00000013652	-	71	38.686
ENSCPBG00000021487	-	69	68.182	ENSCPBG00000005703	-	50	68.182
ENSCPBG00000021487	-	94	65.238	ENSCPBG00000001272	-	99	65.238
ENSCPBG00000021487	-	80	70.696	ENSCPBG00000017489	-	99	70.696
ENSCPBG00000021487	-	77	35.938	ENSCPBG00000026947	ZNF319	93	37.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021487	-	69	53.636	ENSAMXG00000029161	-	80	53.636	Astyanax_mexicanus
ENSCPBG00000021487	-	77	58.763	ENSGAGG00000016529	-	90	58.763	Gopherus_agassizii
ENSCPBG00000021487	-	82	80.952	ENSGAGG00000020134	-	69	80.952	Gopherus_agassizii
ENSCPBG00000021487	-	95	64.324	ENSGAGG00000011487	-	100	64.324	Gopherus_agassizii
ENSCPBG00000021487	-	95	58.636	ENSGAGG00000010833	-	98	60.227	Gopherus_agassizii
ENSCPBG00000021487	-	93	63.158	ENSGAGG00000002214	-	99	63.158	Gopherus_agassizii
ENSCPBG00000021487	-	93	61.278	ENSGAGG00000002179	-	100	61.278	Gopherus_agassizii
ENSCPBG00000021487	-	93	55.882	ENSGAGG00000001645	-	91	55.515	Gopherus_agassizii
ENSCPBG00000021487	-	95	57.519	ENSGAGG00000009272	-	99	57.519	Gopherus_agassizii
ENSCPBG00000021487	-	96	85.484	ENSGAGG00000010324	-	76	85.484	Gopherus_agassizii
ENSCPBG00000021487	-	79	50.000	ENSGAGG00000018445	-	93	51.705	Gopherus_agassizii
ENSCPBG00000021487	-	96	51.171	ENSGAGG00000014356	-	94	51.171	Gopherus_agassizii
ENSCPBG00000021487	-	89	49.041	ENSGAGG00000012452	-	92	47.978	Gopherus_agassizii
ENSCPBG00000021487	-	95	51.010	ENSPSIG00000015465	-	99	51.010	Pelodiscus_sinensis
ENSCPBG00000021487	-	90	45.843	ENSPSIG00000009893	-	99	44.862	Pelodiscus_sinensis
ENSCPBG00000021487	-	70	58.525	ENSPSIG00000001026	-	90	58.525	Pelodiscus_sinensis
ENSCPBG00000021487	-	69	61.765	ENSPSIG00000002569	-	73	61.765	Pelodiscus_sinensis
ENSCPBG00000021487	-	93	60.294	ENSPSIG00000012865	-	98	60.294	Pelodiscus_sinensis
ENSCPBG00000021487	-	78	52.174	ENSPSIG00000000522	-	100	50.244	Pelodiscus_sinensis
ENSCPBG00000021487	-	83	55.556	ENSPSIG00000015216	-	97	50.943	Pelodiscus_sinensis
ENSCPBG00000021487	-	68	56.284	ENSTGUG00000018445	-	99	55.102	Taeniopygia_guttata
ENSCPBG00000021487	-	69	54.378	ENSTGUG00000016516	-	99	54.378	Taeniopygia_guttata
ENSCPBG00000021487	-	68	56.000	ENSTGUG00000014614	-	98	53.271	Taeniopygia_guttata
ENSCPBG00000021487	-	69	58.824	ENSTGUG00000018518	-	100	57.937	Taeniopygia_guttata
ENSCPBG00000021487	-	68	54.460	ENSTGUG00000014888	-	98	54.460	Taeniopygia_guttata
ENSCPBG00000021487	-	68	54.487	ENSTGUG00000018374	-	99	54.487	Taeniopygia_guttata
ENSCPBG00000021487	-	69	54.348	ENSTGUG00000016850	-	99	52.913	Taeniopygia_guttata
ENSCPBG00000021487	-	70	51.323	ENSTGUG00000015260	-	100	51.323	Taeniopygia_guttata
ENSCPBG00000021487	-	69	54.098	ENSTGUG00000016781	-	99	52.535	Taeniopygia_guttata
ENSCPBG00000021487	-	69	56.571	ENSTGUG00000013736	-	99	56.571	Taeniopygia_guttata
ENSCPBG00000021487	-	69	61.538	ENSTGUG00000018542	-	100	61.538	Taeniopygia_guttata
ENSCPBG00000021487	-	69	61.111	ENSTGUG00000018349	-	100	61.111	Taeniopygia_guttata
ENSCPBG00000021487	-	69	61.333	ENSTGUG00000018327	-	100	61.333	Taeniopygia_guttata