EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000021502 (Gene tree)
Gene ID: 101940804
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 11514 bases
Position: chrKK083416.1:165149-176662
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000030933	tRNA-synt_1g	PF09334.11	1.4e-15	1	1
ENSCPBP00000030918	tRNA-synt_1g	PF09334.11	1.7e-15	1	1
ENSCPBP00000031104	tRNA-synt_1g	PF09334.11	1.8e-15	1	1
ENSCPBP00000031141	tRNA-synt_1g	PF09334.11	2e-15	1	1
ENSCPBP00000031196	tRNA-synt_1g	PF09334.11	6.6e-15	1	1
ENSCPBP00000031042	tRNA-synt_1g	PF09334.11	2.9e-14	1	1
ENSCPBP00000031206	tRNA-synt_1g	PF09334.11	2.7e-09	1	1
ENSCPBP00000031104	Anticodon_1	PF08264.13	2.4e-34	1	1
ENSCPBP00000031141	Anticodon_1	PF08264.13	2.5e-34	1	1
ENSCPBP00000031206	Anticodon_1	PF08264.13	4.7e-30	1	1
ENSCPBP00000031042	Anticodon_1	PF08264.13	5.6e-30	1	1
ENSCPBP00000031196	Anticodon_1	PF08264.13	5.6e-30	1	1
ENSCPBP00000030933	Anticodon_1	PF08264.13	6.6e-30	1	1
ENSCPBP00000030918	Anticodon_1	PF08264.13	8.5e-30	1	1
ENSCPBP00000030918	tRNA-synt_1	PF00133.22	1.5e-191	1	1
ENSCPBP00000031141	tRNA-synt_1	PF00133.22	1.9e-187	1	1
ENSCPBP00000031042	tRNA-synt_1	PF00133.22	3.2e-184	1	1
ENSCPBP00000031104	tRNA-synt_1	PF00133.22	1e-180	1	2
ENSCPBP00000031104	tRNA-synt_1	PF00133.22	1e-180	2	2
ENSCPBP00000030933	tRNA-synt_1	PF00133.22	1.6e-164	1	2
ENSCPBP00000030933	tRNA-synt_1	PF00133.22	1.6e-164	2	2
ENSCPBP00000031196	tRNA-synt_1	PF00133.22	9.8e-164	1	2
ENSCPBP00000031196	tRNA-synt_1	PF00133.22	9.8e-164	2	2
ENSCPBP00000031206	tRNA-synt_1	PF00133.22	2.9e-144	1	2
ENSCPBP00000031206	tRNA-synt_1	PF00133.22	2.9e-144	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000036528	VARS2-203	2781	-	ENSCPBP00000031042	926 (aa)	-	-
ENSCPBT00000036702	VARS2-206	2772	-	ENSCPBP00000031196	923 (aa)	-	-
ENSCPBT00000036388	VARS2-201	2979	-	ENSCPBP00000030918	992 (aa)	-	-
ENSCPBT00000036713	VARS2-207	2415	-	ENSCPBP00000031206	804 (aa)	-	-
ENSCPBT00000036404	VARS2-202	2787	-	ENSCPBP00000030933	928 (aa)	-	-
ENSCPBT00000036639	VARS2-205	3009	-	ENSCPBP00000031141	1002 (aa)	-	-
ENSCPBT00000036599	VARS2-204	3003	-	ENSCPBP00000031104	1000 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000021502's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000021502	VARS2	93	63.385	ENSCPBG00000007943	VARS	94	52.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021502	VARS2	96	54.894	ENSAPOG00000007396	vars2	91	54.894	Acanthochromis_polyacanthus
ENSCPBG00000021502	VARS2	96	63.337	ENSAMEG00000012997	VARS2	88	63.337	Ailuropoda_melanoleuca
ENSCPBG00000021502	VARS2	96	55.759	ENSACIG00000004344	vars2	92	55.759	Amphilophus_citrinellus
ENSCPBG00000021502	VARS2	96	55.152	ENSAOCG00000000476	vars2	91	55.152	Amphiprion_ocellaris
ENSCPBG00000021502	VARS2	96	55.556	ENSAPEG00000008646	vars2	89	55.556	Amphiprion_percula
ENSCPBG00000021502	VARS2	96	56.721	ENSATEG00000012291	vars2	91	56.721	Anabas_testudineus
ENSCPBG00000021502	VARS2	91	75.851	ENSACAG00000022093	VARS2	90	70.092	Anolis_carolinensis
ENSCPBG00000021502	VARS2	96	62.848	ENSANAG00000038018	VARS2	90	62.848	Aotus_nancymaae
ENSCPBG00000021502	VARS2	96	55.859	ENSACLG00000018673	vars2	92	55.859	Astatotilapia_calliptera
ENSCPBG00000021502	VARS2	96	56.623	ENSAMXG00000017773	vars2	92	58.342	Astyanax_mexicanus
ENSCPBG00000021502	VARS2	96	63.646	ENSBTAG00000010698	VARS2	90	63.646	Bos_taurus
ENSCPBG00000021502	VARS2	96	62.848	ENSCJAG00000019826	VARS2	90	62.848	Callithrix_jacchus
ENSCPBG00000021502	VARS2	96	62.795	ENSCAFG00000000454	VARS2	91	62.795	Canis_familiaris
ENSCPBG00000021502	VARS2	97	59.651	ENSCAFG00020019387	VARS2	89	66.000	Canis_lupus_dingo
ENSCPBG00000021502	VARS2	96	63.440	ENSCHIG00000007847	VARS2	91	62.769	Capra_hircus
ENSCPBG00000021502	VARS2	96	62.474	ENSTSYG00000009904	VARS2	91	62.051	Carlito_syrichta
ENSCPBG00000021502	VARS2	89	62.584	ENSCAPG00000017770	VARS2	96	62.584	Cavia_aperea
ENSCPBG00000021502	VARS2	95	62.866	ENSCPOG00000021834	VARS2	89	63.180	Cavia_porcellus
ENSCPBG00000021502	VARS2	96	62.539	ENSCCAG00000037907	VARS2	90	62.539	Cebus_capucinus
ENSCPBG00000021502	VARS2	96	62.642	ENSCATG00000032554	VARS2	90	62.642	Cercocebus_atys
ENSCPBG00000021502	VARS2	95	62.343	ENSCLAG00000002889	VARS2	90	62.552	Chinchilla_lanigera
ENSCPBG00000021502	VARS2	96	62.745	ENSCSAG00000008327	VARS2	90	62.745	Chlorocebus_sabaeus
ENSCPBG00000021502	VARS2	96	62.332	ENSCANG00000014991	VARS2	89	62.332	Colobus_angolensis_palliatus
ENSCPBG00000021502	VARS2	96	61.895	ENSCGRG00001021535	Vars2	91	61.026	Cricetulus_griseus_chok1gshd
ENSCPBG00000021502	VARS2	96	61.895	ENSCGRG00000014112	Vars2	91	61.026	Cricetulus_griseus_crigri
ENSCPBG00000021502	VARS2	74	70.139	ENSCSEG00000015432	vars2	83	70.139	Cynoglossus_semilaevis
ENSCPBG00000021502	VARS2	68	54.379	ENSCVAG00000017765	vars2	98	54.379	Cyprinodon_variegatus
ENSCPBG00000021502	VARS2	96	55.975	ENSDARG00000056717	vars2	92	55.975	Danio_rerio
ENSCPBG00000021502	VARS2	82	60.072	ENSDORG00000008516	Vars2	91	60.072	Dipodomys_ordii
ENSCPBG00000021502	VARS2	94	56.811	ENSETEG00000014844	VARS2	89	56.737	Echinops_telfairi
ENSCPBG00000021502	VARS2	96	62.978	ENSEASG00005019997	VARS2	94	62.094	Equus_asinus_asinus
ENSCPBG00000021502	VARS2	96	63.543	ENSECAG00000018202	VARS2	91	62.667	Equus_caballus
ENSCPBG00000021502	VARS2	65	64.078	ENSEEUG00000012591	-	61	64.078	Erinaceus_europaeus
ENSCPBG00000021502	VARS2	96	55.110	ENSELUG00000017824	vars2	92	54.121	Esox_lucius
ENSCPBG00000021502	VARS2	96	63.440	ENSFCAG00000010531	VARS2	91	62.974	Felis_catus
ENSCPBG00000021502	VARS2	96	62.076	ENSFDAG00000017216	VARS2	90	62.076	Fukomys_damarensis
ENSCPBG00000021502	VARS2	86	64.526	ENSFHEG00000013932	vars2	92	53.276	Fundulus_heteroclitus
ENSCPBG00000021502	VARS2	98	52.426	ENSGMOG00000018960	vars2	98	56.614	Gadus_morhua
ENSCPBG00000021502	VARS2	82	65.714	ENSGAFG00000004737	vars2	91	65.714	Gambusia_affinis
ENSCPBG00000021502	VARS2	96	55.190	ENSGACG00000001464	vars2	98	55.190	Gasterosteus_aculeatus
ENSCPBG00000021502	VARS2	94	89.958	ENSGAGG00000011652	VARS2	96	89.958	Gopherus_agassizii
ENSCPBG00000021502	VARS2	96	62.642	ENSGGOG00000014587	VARS2	90	62.642	Gorilla_gorilla
ENSCPBG00000021502	VARS2	86	63.975	ENSHBUG00000002448	vars2	93	55.005	Haplochromis_burtoni
ENSCPBG00000021502	VARS2	96	60.946	ENSHGLG00000012886	VARS2	87	61.048	Heterocephalus_glaber_female
ENSCPBG00000021502	VARS2	96	60.843	ENSHGLG00100016535	VARS2	90	60.946	Heterocephalus_glaber_male
ENSCPBG00000021502	VARS2	71	53.352	ENSHCOG00000017907	vars2	97	53.352	Hippocampus_comes
ENSCPBG00000021502	VARS2	96	56.968	ENSIPUG00000015573	Vars2	91	56.968	Ictalurus_punctatus
ENSCPBG00000021502	VARS2	96	61.174	ENSSTOG00000009924	VARS2	90	61.237	Ictidomys_tridecemlineatus
ENSCPBG00000021502	VARS2	96	61.634	ENSJJAG00000011144	Vars2	90	61.634	Jaculus_jaculus
ENSCPBG00000021502	VARS2	96	54.774	ENSKMAG00000001393	vars2	91	54.774	Kryptolebias_marmoratus
ENSCPBG00000021502	VARS2	55	67.742	ENSLBEG00000005480	-	81	65.636	Labrus_bergylta
ENSCPBG00000021502	VARS2	94	55.670	ENSLBEG00000011949	vars2	90	55.670	Labrus_bergylta
ENSCPBG00000021502	VARS2	96	56.853	ENSLACG00000001576	-	95	56.897	Latimeria_chalumnae
ENSCPBG00000021502	VARS2	96	61.998	ENSLAFG00000015183	VARS2	91	61.231	Loxodonta_africana
ENSCPBG00000021502	VARS2	96	62.745	ENSMFAG00000042367	VARS2	90	62.745	Macaca_fascicularis
ENSCPBG00000021502	VARS2	96	62.745	ENSMMUG00000018609	VARS2	90	62.745	Macaca_mulatta
ENSCPBG00000021502	VARS2	96	63.158	ENSMNEG00000043163	VARS2	90	63.158	Macaca_nemestrina
ENSCPBG00000021502	VARS2	96	62.745	ENSMLEG00000041728	VARS2	88	62.745	Mandrillus_leucophaeus
ENSCPBG00000021502	VARS2	96	54.040	ENSMAMG00000020339	vars2	91	54.002	Mastacembelus_armatus
ENSCPBG00000021502	VARS2	96	55.758	ENSMZEG00005017669	vars2	92	55.758	Maylandia_zebra
ENSCPBG00000021502	VARS2	50	55.797	ENSMGAG00000008005	-	99	59.756	Meleagris_gallopavo
ENSCPBG00000021502	VARS2	96	61.895	ENSMAUG00000018946	Vars2	90	61.895	Mesocricetus_auratus
ENSCPBG00000021502	VARS2	85	68.012	ENSMICG00000005365	VARS2	91	66.952	Microcebus_murinus
ENSCPBG00000021502	VARS2	94	68.323	ENSMOCG00000014607	Vars2	90	65.285	Microtus_ochrogaster
ENSCPBG00000021502	VARS2	96	55.123	ENSMMOG00000012122	vars2	92	55.123	Mola_mola
ENSCPBG00000021502	VARS2	95	61.418	ENSMODG00000015848	VARS2	89	61.587	Monodelphis_domestica
ENSCPBG00000021502	VARS2	98	54.409	ENSMALG00000009217	vars2	99	54.409	Monopterus_albus
ENSCPBG00000021502	VARS2	96	62.101	MGP_CAROLIEiJ_G0021529	Vars2	97	62.367	Mus_caroli
ENSCPBG00000021502	VARS2	96	61.934	ENSMUSG00000038838	Vars2	96	62.167	Mus_musculus
ENSCPBG00000021502	VARS2	96	62.268	MGP_PahariEiJ_G0020523	Vars2	96	62.456	Mus_pahari
ENSCPBG00000021502	VARS2	95	62.357	MGP_SPRETEiJ_G0022436	Vars2	97	62.787	Mus_spretus
ENSCPBG00000021502	VARS2	96	63.749	ENSMPUG00000011643	VARS2	91	63.077	Mustela_putorius_furo
ENSCPBG00000021502	VARS2	96	62.819	ENSMLUG00000002356	VARS2	88	62.921	Myotis_lucifugus
ENSCPBG00000021502	VARS2	92	57.787	ENSNGAG00000020607	Vars2	87	57.787	Nannospalax_galili
ENSCPBG00000021502	VARS2	63	54.085	ENSNBRG00000001624	vars2	57	54.085	Neolamprologus_brichardi
ENSCPBG00000021502	VARS2	96	62.798	ENSNLEG00000005625	VARS2	89	62.798	Nomascus_leucogenys
ENSCPBG00000021502	VARS2	70	72.222	ENSMEUG00000014475	VARS2	86	62.395	Notamacropus_eugenii
ENSCPBG00000021502	VARS2	85	69.079	ENSOPRG00000000682	VARS2	80	69.079	Ochotona_princeps
ENSCPBG00000021502	VARS2	95	62.448	ENSODEG00000017965	VARS2	90	62.657	Octodon_degus
ENSCPBG00000021502	VARS2	96	38.567	ENSONIG00000004734	vars2	98	40.299	Oreochromis_niloticus
ENSCPBG00000021502	VARS2	77	67.647	ENSOANG00000000398	-	94	67.647	Ornithorhynchus_anatinus
ENSCPBG00000021502	VARS2	96	58.502	ENSOCUG00000021496	VARS2	59	57.773	Oryctolagus_cuniculus
ENSCPBG00000021502	VARS2	96	55.287	ENSORLG00000010632	vars2	91	55.287	Oryzias_latipes
ENSCPBG00000021502	VARS2	96	55.343	ENSORLG00020018584	vars2	91	55.343	Oryzias_latipes_hni
ENSCPBG00000021502	VARS2	96	55.242	ENSORLG00015010408	vars2	91	55.242	Oryzias_latipes_hsok
ENSCPBG00000021502	VARS2	86	66.055	ENSOMEG00000008360	vars2	91	55.859	Oryzias_melastigma
ENSCPBG00000021502	VARS2	96	62.282	ENSOGAG00000006087	VARS2	88	62.282	Otolemur_garnettii
ENSCPBG00000021502	VARS2	96	62.757	ENSOARG00000010844	VARS2	89	62.757	Ovis_aries
ENSCPBG00000021502	VARS2	96	62.642	ENSPPAG00000041141	VARS2	90	62.642	Pan_paniscus
ENSCPBG00000021502	VARS2	96	63.458	ENSPPRG00000006751	VARS2	88	63.458	Panthera_pardus
ENSCPBG00000021502	VARS2	96	63.354	ENSPTIG00000017799	VARS2	95	63.131	Panthera_tigris_altaica
ENSCPBG00000021502	VARS2	96	62.642	ENSPTRG00000034497	VARS2	90	62.642	Pan_troglodytes
ENSCPBG00000021502	VARS2	96	62.848	ENSPANG00000018481	VARS2	93	62.848	Papio_anubis
ENSCPBG00000021502	VARS2	96	57.760	ENSPKIG00000011372	vars2	91	57.760	Paramormyrops_kingsleyae
ENSCPBG00000021502	VARS2	63	90.709	ENSPSIG00000006206	VARS2	92	89.815	Pelodiscus_sinensis
ENSCPBG00000021502	VARS2	96	56.434	ENSPMGG00000000465	vars2	92	57.231	Periophthalmus_magnuspinnatus
ENSCPBG00000021502	VARS2	96	62.371	ENSPEMG00000014691	Vars2	91	61.538	Peromyscus_maniculatus_bairdii
ENSCPBG00000021502	VARS2	95	62.959	ENSPCIG00000015040	VARS2	90	62.998	Phascolarctos_cinereus
ENSCPBG00000021502	VARS2	88	64.526	ENSPFOG00000017616	vars2	91	55.635	Poecilia_formosa
ENSCPBG00000021502	VARS2	87	64.526	ENSPLAG00000019778	vars2	92	55.263	Poecilia_latipinna
ENSCPBG00000021502	VARS2	87	64.526	ENSPMEG00000011123	vars2	92	54.463	Poecilia_mexicana
ENSCPBG00000021502	VARS2	95	49.592	ENSPREG00000014998	vars2	93	49.592	Poecilia_reticulata
ENSCPBG00000021502	VARS2	96	62.642	ENSPPYG00000016424	VARS2	90	62.642	Pongo_abelii
ENSCPBG00000021502	VARS2	79	69.231	ENSPCAG00000006946	VARS2	75	69.231	Procavia_capensis
ENSCPBG00000021502	VARS2	96	61.973	ENSPCOG00000014839	VARS2	88	61.973	Propithecus_coquereli
ENSCPBG00000021502	VARS2	95	63.389	ENSPVAG00000004197	VARS2	89	63.845	Pteropus_vampyrus
ENSCPBG00000021502	VARS2	88	58.777	ENSPNYG00000010314	vars2	98	58.777	Pundamilia_nyererei
ENSCPBG00000021502	VARS2	96	56.579	ENSPNAG00000026793	vars2	91	56.579	Pygocentrus_nattereri
ENSCPBG00000021502	VARS2	96	61.689	ENSRNOG00000000833	Vars2	90	61.753	Rattus_norvegicus
ENSCPBG00000021502	VARS2	96	62.436	ENSRBIG00000032725	VARS2	90	62.436	Rhinopithecus_bieti
ENSCPBG00000021502	VARS2	96	62.332	ENSRROG00000043847	VARS2	90	62.332	Rhinopithecus_roxellana
ENSCPBG00000021502	VARS2	96	61.251	ENSSBOG00000033240	VARS2	88	61.352	Saimiri_boliviensis_boliviensis
ENSCPBG00000021502	VARS2	95	63.136	ENSSHAG00000009307	VARS2	91	63.136	Sarcophilus_harrisii
ENSCPBG00000021502	VARS2	96	56.434	ENSSFOG00015016187	vars2	90	56.434	Scleropages_formosus
ENSCPBG00000021502	VARS2	95	56.846	ENSSMAG00000020842	vars2	91	55.864	Scophthalmus_maximus
ENSCPBG00000021502	VARS2	96	55.567	ENSSDUG00000011598	vars2	91	55.567	Seriola_dumerili
ENSCPBG00000021502	VARS2	85	65.046	ENSSLDG00000015492	vars2	90	55.904	Seriola_lalandi_dorsalis
ENSCPBG00000021502	VARS2	57	69.630	ENSSARG00000003786	-	61	70.370	Sorex_araneus
ENSCPBG00000021502	VARS2	95	76.453	ENSSPUG00000014700	VARS2	96	70.576	Sphenodon_punctatus
ENSCPBG00000021502	VARS2	95	54.244	ENSSPAG00000004654	vars2	90	54.244	Stegastes_partitus
ENSCPBG00000021502	VARS2	97	61.948	ENSSSCG00000001384	VARS2	93	63.175	Sus_scrofa
ENSCPBG00000021502	VARS2	96	56.263	ENSTRUG00000005264	vars2	93	56.263	Takifugu_rubripes
ENSCPBG00000021502	VARS2	96	56.295	ENSTNIG00000005916	vars2	91	56.499	Tetraodon_nigroviridis
ENSCPBG00000021502	VARS2	89	73.510	ENSTTRG00000012243	VARS2	83	73.510	Tursiops_truncatus
ENSCPBG00000021502	VARS2	94	68.944	ENSUAMG00000026124	VARS2	97	63.344	Ursus_americanus
ENSCPBG00000021502	VARS2	96	68.370	ENSUMAG00000019894	VARS2	91	62.872	Ursus_maritimus
ENSCPBG00000021502	VARS2	98	61.996	ENSVVUG00000010754	VARS2	88	61.996	Vulpes_vulpes
ENSCPBG00000021502	VARS2	93	57.487	ENSXETG00000003036	vars2	99	57.487	Xenopus_tropicalis
ENSCPBG00000021502	VARS2	87	64.832	ENSXCOG00000003455	vars2	93	56.269	Xiphophorus_couchianus
ENSCPBG00000021502	VARS2	87	64.832	ENSXMAG00000013523	vars2	91	55.051	Xiphophorus_maculatus