EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000021620 (Gene tree)
Gene ID: 101954070
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 15495 bases
Position: chrKK088220.1:155071-170565
Accession: 18466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000030742	RNase_H	PF00075.24	1.3e-45	1	1
ENSCPBP00000030741	RNase_H	PF00075.24	2.6e-45	1	1
ENSCPBP00000030739	RNase_H	PF00075.24	3.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000036190	RNASEH1-201	2219	-	ENSCPBP00000030739	407 (aa)	-	-
ENSCPBT00000036192	RNASEH1-202	1219	-	ENSCPBP00000030741	359 (aa)	-	-
ENSCPBT00000036193	RNASEH1-203	1081	-	ENSCPBP00000030742	271 (aa)	XP_005289704	UPI000CE63555

Gene Model

Click here to download ENSCPBG00000021620's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021620	RNASEH1	98	61.481	ENSG00000171865	RNASEH1	91	61.091	Homo_sapiens
ENSCPBG00000021620	RNASEH1	99	55.351	ENSAPOG00000000412	rnaseh1	88	55.351	Acanthochromis_polyacanthus
ENSCPBG00000021620	RNASEH1	98	65.789	ENSAMEG00000018433	RNASEH1	90	65.926	Ailuropoda_melanoleuca
ENSCPBG00000021620	RNASEH1	99	55.597	ENSACIG00000014666	rnaseh1	90	54.348	Amphilophus_citrinellus
ENSCPBG00000021620	RNASEH1	99	55.351	ENSAOCG00000015210	rnaseh1	88	55.351	Amphiprion_ocellaris
ENSCPBG00000021620	RNASEH1	99	55.720	ENSAPEG00000014104	rnaseh1	88	55.720	Amphiprion_percula
ENSCPBG00000021620	RNASEH1	99	56.667	ENSATEG00000000598	rnaseh1	94	56.667	Anabas_testudineus
ENSCPBG00000021620	RNASEH1	94	65.759	ENSAPLG00000001961	RNASEH1	100	65.759	Anas_platyrhynchos
ENSCPBG00000021620	RNASEH1	99	61.667	ENSACAG00000016857	rnaseh1	91	61.667	Anolis_carolinensis
ENSCPBG00000021620	RNASEH1	98	63.296	ENSANAG00000024055	RNASEH1	91	62.868	Aotus_nancymaae
ENSCPBG00000021620	RNASEH1	99	54.710	ENSACLG00000006741	rnaseh1	90	53.521	Astatotilapia_calliptera
ENSCPBG00000021620	RNASEH1	98	50.554	ENSAMXG00000042940	rnaseh1	96	50.554	Astyanax_mexicanus
ENSCPBG00000021620	RNASEH1	98	62.782	ENSBTAG00000016235	RNASEH1	91	62.731	Bos_taurus
ENSCPBG00000021620	RNASEH1	98	36.604	WBGene00004382	rnh-1.0	95	36.604	Caenorhabditis_elegans
ENSCPBG00000021620	RNASEH1	98	61.255	ENSCJAG00000035450	RNASEH1	91	60.870	Callithrix_jacchus
ENSCPBG00000021620	RNASEH1	98	64.286	ENSCAFG00000003259	RNASEH1	92	63.504	Canis_familiaris
ENSCPBG00000021620	RNASEH1	55	79.333	ENSCAFG00020004994	RNASEH1	97	79.333	Canis_lupus_dingo
ENSCPBG00000021620	RNASEH1	90	51.429	ENSCHIG00000022230	-	98	51.429	Capra_hircus
ENSCPBG00000021620	RNASEH1	98	65.414	ENSCHIG00000022264	-	89	65.414	Capra_hircus
ENSCPBG00000021620	RNASEH1	99	64.815	ENSTSYG00000012926	RNASEH1	90	64.469	Carlito_syrichta
ENSCPBG00000021620	RNASEH1	92	64.000	ENSCAPG00000004813	RNASEH1	97	64.000	Cavia_aperea
ENSCPBG00000021620	RNASEH1	98	64.925	ENSCPOG00000022278	Rnaseh1	86	64.925	Cavia_porcellus
ENSCPBG00000021620	RNASEH1	98	62.362	ENSCCAG00000038017	RNASEH1	91	61.957	Cebus_capucinus
ENSCPBG00000021620	RNASEH1	98	56.015	ENSCATG00000016818	-	91	55.311	Cercocebus_atys
ENSCPBG00000021620	RNASEH1	98	61.798	ENSCATG00000016515	-	91	61.397	Cercocebus_atys
ENSCPBG00000021620	RNASEH1	98	63.806	ENSCLAG00000002440	RNASEH1	89	63.806	Chinchilla_lanigera
ENSCPBG00000021620	RNASEH1	98	61.798	ENSCSAG00000006943	RNASEH1	90	61.481	Chlorocebus_sabaeus
ENSCPBG00000021620	RNASEH1	63	78.363	ENSCHOG00000008547	RNASEH1	84	78.363	Choloepus_hoffmanni
ENSCPBG00000021620	RNASEH1	98	39.286	ENSCING00000014054	-	91	39.286	Ciona_intestinalis
ENSCPBG00000021620	RNASEH1	84	39.130	ENSCSAVG00000000009	-	97	39.056	Ciona_savignyi
ENSCPBG00000021620	RNASEH1	98	61.567	ENSCANG00000037763	RNASEH1	91	61.172	Colobus_angolensis_palliatus
ENSCPBG00000021620	RNASEH1	98	65.556	ENSCGRG00001008950	Rnaseh1	90	65.201	Cricetulus_griseus_chok1gshd
ENSCPBG00000021620	RNASEH1	98	65.556	ENSCGRG00000006029	Rnaseh1	90	65.201	Cricetulus_griseus_crigri
ENSCPBG00000021620	RNASEH1	99	51.301	ENSCSEG00000005741	rnaseh1	94	50.183	Cynoglossus_semilaevis
ENSCPBG00000021620	RNASEH1	99	54.945	ENSCVAG00000018717	rnaseh1	88	55.678	Cyprinodon_variegatus
ENSCPBG00000021620	RNASEH1	99	56.584	ENSDARG00000042571	rnaseh1	97	56.584	Danio_rerio
ENSCPBG00000021620	RNASEH1	98	62.406	ENSDNOG00000016056	RNASEH1	90	62.082	Dasypus_novemcinctus
ENSCPBG00000021620	RNASEH1	98	63.158	ENSDORG00000000704	Rnaseh1	96	59.649	Dipodomys_ordii
ENSCPBG00000021620	RNASEH1	98	36.860	FBgn0023171	rnh1	92	37.075	Drosophila_melanogaster
ENSCPBG00000021620	RNASEH1	99	60.440	ENSETEG00000012674	RNASEH1	89	60.440	Echinops_telfairi
ENSCPBG00000021620	RNASEH1	98	48.881	ENSEBUG00000006116	rnaseh1	78	48.134	Eptatretus_burgeri
ENSCPBG00000021620	RNASEH1	99	44.257	ENSEBUG00000008898	rnaseh1	98	44.257	Eptatretus_burgeri
ENSCPBG00000021620	RNASEH1	98	64.552	ENSEASG00005022200	RNASEH1	89	64.338	Equus_asinus_asinus
ENSCPBG00000021620	RNASEH1	98	64.552	ENSECAG00000020695	RNASEH1	89	64.338	Equus_caballus
ENSCPBG00000021620	RNASEH1	100	53.957	ENSELUG00000010112	rnaseh1	91	53.957	Esox_lucius
ENSCPBG00000021620	RNASEH1	98	64.662	ENSFCAG00000025832	RNASEH1	92	63.869	Felis_catus
ENSCPBG00000021620	RNASEH1	98	69.597	ENSFALG00000002069	RNASEH1	92	69.963	Ficedula_albicollis
ENSCPBG00000021620	RNASEH1	98	63.704	ENSFDAG00000002035	RNASEH1	79	63.704	Fukomys_damarensis
ENSCPBG00000021620	RNASEH1	100	55.515	ENSGMOG00000013818	rnaseh1	90	55.515	Gadus_morhua
ENSCPBG00000021620	RNASEH1	99	68.266	ENSGALG00000016389	RNASEH1	94	67.626	Gallus_gallus
ENSCPBG00000021620	RNASEH1	99	55.474	ENSGAFG00000001776	rnaseh1	90	55.474	Gambusia_affinis
ENSCPBG00000021620	RNASEH1	99	54.444	ENSGACG00000011935	rnaseh1	92	53.237	Gasterosteus_aculeatus
ENSCPBG00000021620	RNASEH1	99	95.941	ENSGAGG00000009150	RNASEH1	84	82.210	Gopherus_agassizii
ENSCPBG00000021620	RNASEH1	98	62.313	ENSGGOG00000034822	RNASEH1	91	61.905	Gorilla_gorilla
ENSCPBG00000021620	RNASEH1	99	55.072	ENSHBUG00000004666	rnaseh1	90	53.873	Haplochromis_burtoni
ENSCPBG00000021620	RNASEH1	98	63.333	ENSHGLG00000002585	Rnaseh1	83	63.469	Heterocephalus_glaber_female
ENSCPBG00000021620	RNASEH1	98	63.333	ENSHGLG00100005105	Rnaseh1	83	63.469	Heterocephalus_glaber_male
ENSCPBG00000021620	RNASEH1	99	55.147	ENSHCOG00000012329	rnaseh1	91	54.386	Hippocampus_comes
ENSCPBG00000021620	RNASEH1	99	54.647	ENSIPUG00000023060	rnaseh1	97	54.815	Ictalurus_punctatus
ENSCPBG00000021620	RNASEH1	98	63.158	ENSSTOG00000012774	RNASEH1	92	62.825	Ictidomys_tridecemlineatus
ENSCPBG00000021620	RNASEH1	98	58.889	ENSJJAG00000021481	-	90	58.608	Jaculus_jaculus
ENSCPBG00000021620	RNASEH1	90	63.158	ENSJJAG00000020238	Rnaseh1	91	62.800	Jaculus_jaculus
ENSCPBG00000021620	RNASEH1	96	52.652	ENSJJAG00000008994	-	88	52.652	Jaculus_jaculus
ENSCPBG00000021620	RNASEH1	99	54.104	ENSKMAG00000001373	rnaseh1	88	54.104	Kryptolebias_marmoratus
ENSCPBG00000021620	RNASEH1	100	52.574	ENSLBEG00000004480	rnaseh1	97	52.574	Labrus_bergylta
ENSCPBG00000021620	RNASEH1	99	61.538	ENSLACG00000007100	RNASEH1	89	61.011	Latimeria_chalumnae
ENSCPBG00000021620	RNASEH1	99	59.489	ENSLOCG00000017212	rnaseh1	97	59.707	Lepisosteus_oculatus
ENSCPBG00000021620	RNASEH1	98	66.052	ENSLAFG00000015091	RNASEH1	90	65.693	Loxodonta_africana
ENSCPBG00000021620	RNASEH1	98	57.303	ENSMFAG00000002323	-	91	56.569	Macaca_fascicularis
ENSCPBG00000021620	RNASEH1	98	61.567	ENSMFAG00000000063	-	91	61.172	Macaca_fascicularis
ENSCPBG00000021620	RNASEH1	98	57.678	ENSMMUG00000019280	-	91	56.934	Macaca_mulatta
ENSCPBG00000021620	RNASEH1	98	57.303	ENSMNEG00000029676	-	91	56.569	Macaca_nemestrina
ENSCPBG00000021620	RNASEH1	98	61.940	ENSMNEG00000040183	-	91	61.538	Macaca_nemestrina
ENSCPBG00000021620	RNASEH1	98	59.551	ENSMLEG00000028662	-	91	59.191	Mandrillus_leucophaeus
ENSCPBG00000021620	RNASEH1	92	61.446	ENSMLEG00000039352	-	98	61.446	Mandrillus_leucophaeus
ENSCPBG00000021620	RNASEH1	99	56.777	ENSMAMG00000019725	rnaseh1	94	56.777	Mastacembelus_armatus
ENSCPBG00000021620	RNASEH1	99	54.710	ENSMZEG00005013006	rnaseh1	90	53.521	Maylandia_zebra
ENSCPBG00000021620	RNASEH1	89	68.033	ENSMGAG00000013979	RNASEH1	99	68.033	Meleagris_gallopavo
ENSCPBG00000021620	RNASEH1	98	64.444	ENSMAUG00000014957	Rnaseh1	90	64.103	Mesocricetus_auratus
ENSCPBG00000021620	RNASEH1	98	65.428	ENSMICG00000033156	RNASEH1	89	65.074	Microcebus_murinus
ENSCPBG00000021620	RNASEH1	98	64.103	ENSMOCG00000015522	Rnaseh1	90	63.768	Microtus_ochrogaster
ENSCPBG00000021620	RNASEH1	98	54.682	ENSMMOG00000015902	rnaseh1	90	53.455	Mola_mola
ENSCPBG00000021620	RNASEH1	89	50.417	ENSMODG00000028814	-	98	48.413	Monodelphis_domestica
ENSCPBG00000021620	RNASEH1	99	64.684	ENSMODG00000014491	-	90	64.576	Monodelphis_domestica
ENSCPBG00000021620	RNASEH1	99	55.515	ENSMALG00000010565	rnaseh1	91	54.286	Monopterus_albus
ENSCPBG00000021620	RNASEH1	98	64.576	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	64.234	Mus_caroli
ENSCPBG00000021620	RNASEH1	98	64.207	ENSMUSG00000020630	Rnaseh1	90	63.869	Mus_musculus
ENSCPBG00000021620	RNASEH1	98	63.838	MGP_PahariEiJ_G0029418	Rnaseh1	90	63.504	Mus_pahari
ENSCPBG00000021620	RNASEH1	98	64.444	MGP_SPRETEiJ_G0018502	Rnaseh1	90	64.103	Mus_spretus
ENSCPBG00000021620	RNASEH1	71	67.358	ENSMPUG00000012984	RNASEH1	94	67.358	Mustela_putorius_furo
ENSCPBG00000021620	RNASEH1	98	60.223	ENSNGAG00000015966	Rnaseh1	86	59.489	Nannospalax_galili
ENSCPBG00000021620	RNASEH1	99	54.815	ENSNBRG00000008739	rnaseh1	90	53.873	Neolamprologus_brichardi
ENSCPBG00000021620	RNASEH1	91	55.466	ENSNLEG00000000059	-	88	55.466	Nomascus_leucogenys
ENSCPBG00000021620	RNASEH1	98	51.685	ENSNLEG00000015400	RNASEH1	89	51.471	Nomascus_leucogenys
ENSCPBG00000021620	RNASEH1	99	44.074	ENSMEUG00000003610	-	91	43.750	Notamacropus_eugenii
ENSCPBG00000021620	RNASEH1	98	63.235	ENSOPRG00000005072	RNASEH1	90	62.909	Ochotona_princeps
ENSCPBG00000021620	RNASEH1	98	63.806	ENSODEG00000000235	Rnaseh1	86	63.806	Octodon_degus
ENSCPBG00000021620	RNASEH1	99	54.348	ENSONIG00000018697	rnaseh1	97	54.348	Oreochromis_niloticus
ENSCPBG00000021620	RNASEH1	98	64.552	ENSOCUG00000006117	RNASEH1	90	64.207	Oryctolagus_cuniculus
ENSCPBG00000021620	RNASEH1	99	53.791	ENSORLG00000018127	rnaseh1	95	55.185	Oryzias_latipes
ENSCPBG00000021620	RNASEH1	99	53.791	ENSORLG00020013660	rnaseh1	88	55.185	Oryzias_latipes_hni
ENSCPBG00000021620	RNASEH1	99	55.185	ENSORLG00015011338	rnaseh1	88	55.185	Oryzias_latipes_hsok
ENSCPBG00000021620	RNASEH1	90	54.508	ENSOMEG00000004710	rnaseh1	90	54.508	Oryzias_melastigma
ENSCPBG00000021620	RNASEH1	98	63.235	ENSOGAG00000017176	RNASEH1	89	63.235	Otolemur_garnettii
ENSCPBG00000021620	RNASEH1	98	53.506	ENSOARG00000005386	RNASEH1	90	53.285	Ovis_aries
ENSCPBG00000021620	RNASEH1	98	61.481	ENSPPAG00000034221	RNASEH1	91	61.091	Pan_paniscus
ENSCPBG00000021620	RNASEH1	98	63.910	ENSPPRG00000015513	RNASEH1	92	63.139	Panthera_pardus
ENSCPBG00000021620	RNASEH1	92	63.710	ENSPTIG00000019034	RNASEH1	83	63.710	Panthera_tigris_altaica
ENSCPBG00000021620	RNASEH1	98	61.481	ENSPTRG00000011614	RNASEH1	91	61.091	Pan_troglodytes
ENSCPBG00000021620	RNASEH1	91	53.846	ENSPTRG00000043403	-	94	52.985	Pan_troglodytes
ENSCPBG00000021620	RNASEH1	98	61.049	ENSPANG00000000443	RNASEH1	97	60.159	Papio_anubis
ENSCPBG00000021620	RNASEH1	98	55.431	ENSPANG00000018246	-	91	54.745	Papio_anubis
ENSCPBG00000021620	RNASEH1	99	53.455	ENSPKIG00000003146	rnaseh1	97	55.431	Paramormyrops_kingsleyae
ENSCPBG00000021620	RNASEH1	100	90.809	ENSPSIG00000002937	RNASEH1	100	90.809	Pelodiscus_sinensis
ENSCPBG00000021620	RNASEH1	98	53.383	ENSPMGG00000017463	rnaseh1	97	47.331	Periophthalmus_magnuspinnatus
ENSCPBG00000021620	RNASEH1	98	62.132	ENSPEMG00000022465	-	90	61.818	Peromyscus_maniculatus_bairdii
ENSCPBG00000021620	RNASEH1	99	62.825	ENSPCIG00000023334	-	90	62.731	Phascolarctos_cinereus
ENSCPBG00000021620	RNASEH1	55	41.447	ENSPCIG00000026047	-	85	41.447	Phascolarctos_cinereus
ENSCPBG00000021620	RNASEH1	99	55.273	ENSPFOG00000002841	rnaseh1	90	55.273	Poecilia_formosa
ENSCPBG00000021620	RNASEH1	72	44.724	ENSPLAG00000021349	-	74	44.724	Poecilia_latipinna
ENSCPBG00000021620	RNASEH1	99	55.273	ENSPMEG00000016826	rnaseh1	90	55.273	Poecilia_mexicana
ENSCPBG00000021620	RNASEH1	99	54.710	ENSPREG00000012197	rnaseh1	90	54.710	Poecilia_reticulata
ENSCPBG00000021620	RNASEH1	98	51.685	ENSPPYG00000025873	RNASEH1	90	51.471	Pongo_abelii
ENSCPBG00000021620	RNASEH1	91	56.048	ENSPPYG00000008067	-	92	55.731	Pongo_abelii
ENSCPBG00000021620	RNASEH1	98	61.029	ENSPCAG00000002500	RNASEH1	90	60.364	Procavia_capensis
ENSCPBG00000021620	RNASEH1	98	60.595	ENSPCOG00000019444	RNASEH1	89	60.662	Propithecus_coquereli
ENSCPBG00000021620	RNASEH1	98	61.278	ENSPVAG00000002070	RNASEH1	89	61.278	Pteropus_vampyrus
ENSCPBG00000021620	RNASEH1	99	54.074	ENSPNYG00000001292	rnaseh1	90	53.169	Pundamilia_nyererei
ENSCPBG00000021620	RNASEH1	99	58.029	ENSPNAG00000022344	rnaseh1	90	57.818	Pygocentrus_nattereri
ENSCPBG00000021620	RNASEH1	98	63.910	ENSRNOG00000008584	Rnaseh1	90	64.103	Rattus_norvegicus
ENSCPBG00000021620	RNASEH1	98	61.567	ENSRBIG00000034222	RNASEH1	90	61.172	Rhinopithecus_bieti
ENSCPBG00000021620	RNASEH1	98	61.567	ENSRROG00000041761	RNASEH1	90	61.172	Rhinopithecus_roxellana
ENSCPBG00000021620	RNASEH1	98	62.362	ENSSBOG00000025411	RNASEH1	91	61.957	Saimiri_boliviensis_boliviensis
ENSCPBG00000021620	RNASEH1	99	65.799	ENSSHAG00000013051	RNASEH1	88	65.799	Sarcophilus_harrisii
ENSCPBG00000021620	RNASEH1	99	53.521	ENSSFOG00015002709	rnaseh1	91	53.261	Scleropages_formosus
ENSCPBG00000021620	RNASEH1	99	56.134	ENSSMAG00000007586	rnaseh1	87	56.134	Scophthalmus_maximus
ENSCPBG00000021620	RNASEH1	98	54.074	ENSSDUG00000008217	rnaseh1	93	54.074	Seriola_dumerili
ENSCPBG00000021620	RNASEH1	96	53.232	ENSSLDG00000000442	rnaseh1	93	54.724	Seriola_lalandi_dorsalis
ENSCPBG00000021620	RNASEH1	100	73.432	ENSSPUG00000006644	RNASEH1	95	72.826	Sphenodon_punctatus
ENSCPBG00000021620	RNASEH1	99	57.721	ENSSPAG00000009353	rnaseh1	88	57.721	Stegastes_partitus
ENSCPBG00000021620	RNASEH1	98	61.993	ENSSSCG00000025305	RNASEH1	89	61.993	Sus_scrofa
ENSCPBG00000021620	RNASEH1	99	67.870	ENSTGUG00000012980	RNASEH1	93	67.870	Taeniopygia_guttata
ENSCPBG00000021620	RNASEH1	99	56.044	ENSTRUG00000015774	rnaseh1	95	56.044	Takifugu_rubripes
ENSCPBG00000021620	RNASEH1	99	57.037	ENSTNIG00000010715	rnaseh1	95	57.037	Tetraodon_nigroviridis
ENSCPBG00000021620	RNASEH1	98	60.075	ENSTTRG00000001615	RNASEH1	90	59.779	Tursiops_truncatus
ENSCPBG00000021620	RNASEH1	58	77.215	ENSUAMG00000018254	RNASEH1	82	77.215	Ursus_americanus
ENSCPBG00000021620	RNASEH1	77	59.135	ENSUMAG00000003941	RNASEH1	64	60.784	Ursus_maritimus
ENSCPBG00000021620	RNASEH1	98	50.373	ENSVPAG00000011589	RNASEH1	90	50.185	Vicugna_pacos
ENSCPBG00000021620	RNASEH1	98	63.534	ENSVVUG00000008633	RNASEH1	82	62.774	Vulpes_vulpes
ENSCPBG00000021620	RNASEH1	99	56.250	ENSXETG00000001212	rnaseh1	91	56.250	Xenopus_tropicalis
ENSCPBG00000021620	RNASEH1	77	58.621	ENSXETG00000030371	-	100	58.621	Xenopus_tropicalis
ENSCPBG00000021620	RNASEH1	99	54.015	ENSXMAG00000002357	rnaseh1	90	54.015	Xiphophorus_maculatus