EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000021965 (Gene tree)
Gene ID: 101944420
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 31929 bases
Position: chrKK083066.1:2194611-2226539
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000031757	YTH	PF04146.15	3.6e-40	1	1
ENSCPBP00000031752	YTH	PF04146.15	3.9e-40	1	1
ENSCPBP00000031751	YTH	PF04146.15	4e-40	1	1
ENSCPBP00000031745	YTH	PF04146.15	4.3e-40	1	1
ENSCPBP00000031744	YTH	PF04146.15	4.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037351	YTHDC1-201	2169	-	ENSCPBP00000031744	722 (aa)	-	-
ENSCPBT00000037358	YTHDC1-203	1992	-	ENSCPBP00000031751	663 (aa)	-	-
ENSCPBT00000037352	YTHDC1-202	2079	-	ENSCPBP00000031745	692 (aa)	-	-
ENSCPBT00000037359	YTHDC1-204	1971	-	ENSCPBP00000031752	656 (aa)	-	-
ENSCPBT00000037365	YTHDC1-205	1881	-	ENSCPBP00000031757	626 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000021965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000021965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000021965	YTHDC1	94	87.500	ENSG00000083896	YTHDC1	82	97.368	Homo_sapiens
ENSCPBG00000021965	YTHDC1	65	60.093	ENSAPOG00000013997	ythdc1	92	56.289	Acanthochromis_polyacanthus
ENSCPBG00000021965	YTHDC1	63	97.136	ENSAMEG00000005688	YTHDC1	92	86.350	Ailuropoda_melanoleuca
ENSCPBG00000021965	YTHDC1	63	59.446	ENSACIG00000019728	ythdc1	79	58.559	Amphilophus_citrinellus
ENSCPBG00000021965	YTHDC1	94	52.338	ENSAOCG00000000239	ythdc1	93	58.931	Amphiprion_ocellaris
ENSCPBG00000021965	YTHDC1	86	53.976	ENSAPEG00000000618	ythdc1	89	58.874	Amphiprion_percula
ENSCPBG00000021965	YTHDC1	51	67.062	ENSATEG00000023007	ythdc1	95	58.756	Anabas_testudineus
ENSCPBG00000021965	YTHDC1	94	93.900	ENSAPLG00000009921	YTHDC1	92	94.053	Anas_platyrhynchos
ENSCPBG00000021965	YTHDC1	94	87.362	ENSACAG00000009697	YTHDC1	92	87.481	Anolis_carolinensis
ENSCPBG00000021965	YTHDC1	94	87.211	ENSANAG00000001522	YTHDC1	92	86.607	Aotus_nancymaae
ENSCPBG00000021965	YTHDC1	94	51.424	ENSACLG00000019371	ythdc1	93	58.537	Astatotilapia_calliptera
ENSCPBG00000021965	YTHDC1	94	64.241	ENSAMXG00000006978	ythdc1	91	70.487	Astyanax_mexicanus
ENSCPBG00000021965	YTHDC1	94	86.595	ENSBTAG00000015572	YTHDC1	92	85.863	Bos_taurus
ENSCPBG00000021965	YTHDC1	94	87.211	ENSCJAG00000009934	YTHDC1	92	86.607	Callithrix_jacchus
ENSCPBG00000021965	YTHDC1	63	97.136	ENSCAFG00000002821	YTHDC1	92	86.202	Canis_familiaris
ENSCPBG00000021965	YTHDC1	92	82.273	ENSCAFG00020027112	YTHDC1	92	86.202	Canis_lupus_dingo
ENSCPBG00000021965	YTHDC1	92	80.751	ENSCHIG00000004810	YTHDC1	95	85.328	Capra_hircus
ENSCPBG00000021965	YTHDC1	94	87.654	ENSTSYG00000011668	YTHDC1	92	86.736	Carlito_syrichta
ENSCPBG00000021965	YTHDC1	94	59.909	ENSCAPG00000008722	YTHDC1	90	61.732	Cavia_aperea
ENSCPBG00000021965	YTHDC1	92	82.137	ENSCPOG00000010929	YTHDC1	92	79.434	Cavia_porcellus
ENSCPBG00000021965	YTHDC1	94	87.635	ENSCCAG00000035754	YTHDC1	92	87.349	Cebus_capucinus
ENSCPBG00000021965	YTHDC1	94	86.149	ENSCATG00000036320	YTHDC1	97	85.413	Cercocebus_atys
ENSCPBG00000021965	YTHDC1	94	86.565	ENSCLAG00000005482	YTHDC1	92	86.140	Chinchilla_lanigera
ENSCPBG00000021965	YTHDC1	94	87.057	ENSCSAG00000005252	YTHDC1	92	86.458	Chlorocebus_sabaeus
ENSCPBG00000021965	YTHDC1	94	87.211	ENSCANG00000004769	YTHDC1	97	84.762	Colobus_angolensis_palliatus
ENSCPBG00000021965	YTHDC1	94	85.366	ENSCGRG00001000816	Ythdc1	92	85.420	Cricetulus_griseus_chok1gshd
ENSCPBG00000021965	YTHDC1	94	86.420	ENSCGRG00000009807	Ythdc1	92	87.068	Cricetulus_griseus_crigri
ENSCPBG00000021965	YTHDC1	94	52.577	ENSCSEG00000020404	ythdc1	93	59.202	Cynoglossus_semilaevis
ENSCPBG00000021965	YTHDC1	62	59.424	ENSCVAG00000022349	ythdc1	93	57.757	Cyprinodon_variegatus
ENSCPBG00000021965	YTHDC1	94	63.876	ENSDARG00000051953	ythdc1	91	68.075	Danio_rerio
ENSCPBG00000021965	YTHDC1	94	87.558	ENSDNOG00000004949	YTHDC1	92	87.237	Dasypus_novemcinctus
ENSCPBG00000021965	YTHDC1	94	86.903	ENSDORG00000013045	Ythdc1	92	86.767	Dipodomys_ordii
ENSCPBG00000021965	YTHDC1	74	97.183	ENSETEG00000001878	YTHDC1	69	97.758	Echinops_telfairi
ENSCPBG00000021965	YTHDC1	90	86.901	ENSEASG00005018383	YTHDC1	92	87.061	Equus_asinus_asinus
ENSCPBG00000021965	YTHDC1	88	96.111	ENSECAG00000018303	YTHDC1	99	83.364	Equus_caballus
ENSCPBG00000021965	YTHDC1	63	95.704	ENSEEUG00000015466	YTHDC1	92	85.417	Erinaceus_europaeus
ENSCPBG00000021965	YTHDC1	94	61.228	ENSELUG00000014029	ythdc1	94	66.190	Esox_lucius
ENSCPBG00000021965	YTHDC1	94	87.231	ENSFCAG00000026791	YTHDC1	92	86.478	Felis_catus
ENSCPBG00000021965	YTHDC1	64	96.517	ENSFALG00000006581	YTHDC1	86	98.469	Ficedula_albicollis
ENSCPBG00000021965	YTHDC1	94	87.461	ENSFDAG00000018560	YTHDC1	92	87.311	Fukomys_damarensis
ENSCPBG00000021965	YTHDC1	55	61.290	ENSFHEG00000001286	ythdc1	62	55.060	Fundulus_heteroclitus
ENSCPBG00000021965	YTHDC1	61	74.009	ENSGMOG00000018815	ythdc1	70	77.340	Gadus_morhua
ENSCPBG00000021965	YTHDC1	94	93.920	ENSGALG00000035906	YTHDC1	88	93.625	Gallus_gallus
ENSCPBG00000021965	YTHDC1	62	63.318	ENSGACG00000015486	ythdc1	57	66.833	Gasterosteus_aculeatus
ENSCPBG00000021965	YTHDC1	100	99.392	ENSGAGG00000007108	YTHDC1	99	99.098	Gopherus_agassizii
ENSCPBG00000021965	YTHDC1	94	86.149	ENSGGOG00000021958	YTHDC1	97	85.385	Gorilla_gorilla
ENSCPBG00000021965	YTHDC1	94	51.574	ENSHBUG00000019288	ythdc1	93	58.537	Haplochromis_burtoni
ENSCPBG00000021965	YTHDC1	94	86.656	ENSHGLG00000006319	-	92	85.778	Heterocephalus_glaber_female
ENSCPBG00000021965	YTHDC1	96	69.375	ENSHGLG00000003239	-	86	70.000	Heterocephalus_glaber_female
ENSCPBG00000021965	YTHDC1	94	86.728	ENSHGLG00100001556	-	92	85.842	Heterocephalus_glaber_male
ENSCPBG00000021965	YTHDC1	96	67.807	ENSHGLG00100008060	-	86	68.585	Heterocephalus_glaber_male
ENSCPBG00000021965	YTHDC1	55	68.293	ENSHCOG00000001520	ythdc1	83	68.293	Hippocampus_comes
ENSCPBG00000021965	YTHDC1	98	68.155	ENSIPUG00000018136	ythdc1	93	67.356	Ictalurus_punctatus
ENSCPBG00000021965	YTHDC1	63	95.082	ENSSTOG00000013652	YTHDC1	92	85.294	Ictidomys_tridecemlineatus
ENSCPBG00000021965	YTHDC1	63	94.379	ENSJJAG00000010268	Ythdc1	93	86.357	Jaculus_jaculus
ENSCPBG00000021965	YTHDC1	63	60.860	ENSKMAG00000006483	ythdc1	86	69.880	Kryptolebias_marmoratus
ENSCPBG00000021965	YTHDC1	64	62.233	ENSLBEG00000020831	ythdc1	71	71.053	Labrus_bergylta
ENSCPBG00000021965	YTHDC1	91	72.670	ENSLACG00000004893	YTHDC1	92	73.934	Latimeria_chalumnae
ENSCPBG00000021965	YTHDC1	94	72.960	ENSLOCG00000003045	ythdc1	91	73.178	Lepisosteus_oculatus
ENSCPBG00000021965	YTHDC1	94	86.943	ENSLAFG00000021592	YTHDC1	99	83.854	Loxodonta_africana
ENSCPBG00000021965	YTHDC1	94	86.149	ENSMFAG00000031927	YTHDC1	97	84.762	Macaca_fascicularis
ENSCPBG00000021965	YTHDC1	94	87.211	ENSMMUG00000002265	YTHDC1	92	86.607	Macaca_mulatta
ENSCPBG00000021965	YTHDC1	94	87.211	ENSMNEG00000033751	YTHDC1	97	84.762	Macaca_nemestrina
ENSCPBG00000021965	YTHDC1	94	87.211	ENSMLEG00000042147	YTHDC1	97	84.762	Mandrillus_leucophaeus
ENSCPBG00000021965	YTHDC1	60	63.070	ENSMAMG00000013122	ythdc1	91	58.511	Mastacembelus_armatus
ENSCPBG00000021965	YTHDC1	94	51.424	ENSMZEG00005023173	ythdc1	93	58.537	Maylandia_zebra
ENSCPBG00000021965	YTHDC1	94	92.960	ENSMGAG00000010391	YTHDC1	92	91.667	Meleagris_gallopavo
ENSCPBG00000021965	YTHDC1	94	85.366	ENSMAUG00000001286	Ythdc1	92	85.272	Mesocricetus_auratus
ENSCPBG00000021965	YTHDC1	94	87.616	ENSMICG00000034640	YTHDC1	92	86.411	Microcebus_murinus
ENSCPBG00000021965	YTHDC1	94	85.933	ENSMOCG00000020201	Ythdc1	92	85.991	Microtus_ochrogaster
ENSCPBG00000021965	YTHDC1	77	54.924	ENSMMOG00000021200	ythdc1	92	52.844	Mola_mola
ENSCPBG00000021965	YTHDC1	94	88.394	ENSMODG00000020754	-	92	88.957	Monodelphis_domestica
ENSCPBG00000021965	YTHDC1	98	50.593	ENSMODG00000010076	-	95	51.274	Monodelphis_domestica
ENSCPBG00000021965	YTHDC1	52	59.706	ENSMODG00000004117	-	92	61.981	Monodelphis_domestica
ENSCPBG00000021965	YTHDC1	70	56.034	ENSMODG00000009173	-	84	61.578	Monodelphis_domestica
ENSCPBG00000021965	YTHDC1	98	58.333	ENSMODG00000014337	-	94	70.558	Monodelphis_domestica
ENSCPBG00000021965	YTHDC1	53	69.774	ENSMALG00000013412	ythdc1	93	59.075	Monopterus_albus
ENSCPBG00000021965	YTHDC1	94	86.265	MGP_CAROLIEiJ_G0027347	Ythdc1	92	86.140	Mus_caroli
ENSCPBG00000021965	YTHDC1	94	86.749	ENSMUSG00000035851	Ythdc1	92	85.863	Mus_musculus
ENSCPBG00000021965	YTHDC1	94	86.595	MGP_PahariEiJ_G0017126	Ythdc1	92	85.863	Mus_pahari
ENSCPBG00000021965	YTHDC1	94	86.903	MGP_SPRETEiJ_G0028339	Ythdc1	92	86.012	Mus_spretus
ENSCPBG00000021965	YTHDC1	72	96.111	ENSMPUG00000001743	YTHDC1	71	97.695	Mustela_putorius_furo
ENSCPBG00000021965	YTHDC1	94	86.977	ENSMLUG00000016300	YTHDC1	92	86.838	Myotis_lucifugus
ENSCPBG00000021965	YTHDC1	58	79.753	ENSNGAG00000024000	Ythdc1	93	76.818	Nannospalax_galili
ENSCPBG00000021965	YTHDC1	63	61.772	ENSNBRG00000007663	ythdc1	70	71.500	Neolamprologus_brichardi
ENSCPBG00000021965	YTHDC1	94	85.518	ENSNLEG00000009202	YTHDC1	97	83.969	Nomascus_leucogenys
ENSCPBG00000021965	YTHDC1	72	81.605	ENSMEUG00000007128	YTHDC1	76	82.720	Notamacropus_eugenii
ENSCPBG00000021965	YTHDC1	79	96.317	ENSOPRG00000008986	YTHDC1	74	96.317	Ochotona_princeps
ENSCPBG00000021965	YTHDC1	94	87.578	ENSODEG00000001715	YTHDC1	92	86.807	Octodon_degus
ENSCPBG00000021965	YTHDC1	89	71.053	ENSONIG00000012651	ythdc1	90	63.636	Oreochromis_niloticus
ENSCPBG00000021965	YTHDC1	92	76.589	ENSOANG00000014398	YTHDC1	71	95.775	Ornithorhynchus_anatinus
ENSCPBG00000021965	YTHDC1	94	77.589	ENSOCUG00000015886	YTHDC1	71	98.271	Oryctolagus_cuniculus
ENSCPBG00000021965	YTHDC1	92	52.607	ENSORLG00000030544	ythdc1	94	59.259	Oryzias_latipes
ENSCPBG00000021965	YTHDC1	94	50.837	ENSORLG00020019316	ythdc1	94	58.398	Oryzias_latipes_hni
ENSCPBG00000021965	YTHDC1	94	51.835	ENSOMEG00000000551	ythdc1	93	57.054	Oryzias_melastigma
ENSCPBG00000021965	YTHDC1	98	87.040	ENSOGAG00000003362	YTHDC1	94	85.756	Otolemur_garnettii
ENSCPBG00000021965	YTHDC1	94	86.595	ENSOARG00000008633	YTHDC1	92	85.863	Ovis_aries
ENSCPBG00000021965	YTHDC1	94	86.433	ENSPPAG00000041315	YTHDC1	97	85.356	Pan_paniscus
ENSCPBG00000021965	YTHDC1	94	86.322	ENSPPRG00000011979	YTHDC1	92	85.463	Panthera_pardus
ENSCPBG00000021965	YTHDC1	94	86.018	ENSPTIG00000015527	YTHDC1	93	85.757	Panthera_tigris_altaica
ENSCPBG00000021965	YTHDC1	94	86.433	ENSPTRG00000016105	YTHDC1	97	85.356	Pan_troglodytes
ENSCPBG00000021965	YTHDC1	94	86.149	ENSPANG00000021590	YTHDC1	96	85.115	Papio_anubis
ENSCPBG00000021965	YTHDC1	94	69.029	ENSPKIG00000018497	ythdc1	92	70.404	Paramormyrops_kingsleyae
ENSCPBG00000021965	YTHDC1	99	97.892	ENSPSIG00000002782	YTHDC1	100	98.413	Pelodiscus_sinensis
ENSCPBG00000021965	YTHDC1	52	62.264	ENSPMGG00000000970	-	64	72.222	Periophthalmus_magnuspinnatus
ENSCPBG00000021965	YTHDC1	94	87.037	ENSPEMG00000013850	Ythdc1	92	86.898	Peromyscus_maniculatus_bairdii
ENSCPBG00000021965	YTHDC1	94	88.553	ENSPCIG00000006870	YTHDC1	92	89.110	Phascolarctos_cinereus
ENSCPBG00000021965	YTHDC1	62	59.637	ENSPFOG00000013404	ythdc1	93	57.781	Poecilia_formosa
ENSCPBG00000021965	YTHDC1	62	59.637	ENSPLAG00000011079	ythdc1	85	69.533	Poecilia_latipinna
ENSCPBG00000021965	YTHDC1	62	59.637	ENSPMEG00000009238	ythdc1	93	57.781	Poecilia_mexicana
ENSCPBG00000021965	YTHDC1	65	63.158	ENSPREG00000016973	ythdc1	92	54.313	Poecilia_reticulata
ENSCPBG00000021965	YTHDC1	83	87.889	ENSPPYG00000014726	YTHDC1	91	88.062	Pongo_abelii
ENSCPBG00000021965	YTHDC1	75	88.182	ENSPCAG00000009607	YTHDC1	76	87.727	Procavia_capensis
ENSCPBG00000021965	YTHDC1	94	81.498	ENSPCOG00000019105	YTHDC1	92	81.536	Propithecus_coquereli
ENSCPBG00000021965	YTHDC1	63	93.795	ENSPVAG00000015551	YTHDC1	92	83.852	Pteropus_vampyrus
ENSCPBG00000021965	YTHDC1	94	51.424	ENSPNYG00000011687	ythdc1	93	58.537	Pundamilia_nyererei
ENSCPBG00000021965	YTHDC1	98	69.809	ENSPNAG00000028365	ythdc1	93	69.310	Pygocentrus_nattereri
ENSCPBG00000021965	YTHDC1	63	94.614	ENSRNOG00000001996	Ythdc1	92	84.311	Rattus_norvegicus
ENSCPBG00000021965	YTHDC1	94	84.932	ENSRBIG00000028279	YTHDC1	97	83.238	Rhinopithecus_bieti
ENSCPBG00000021965	YTHDC1	94	87.211	ENSRROG00000035028	YTHDC1	97	84.762	Rhinopithecus_roxellana
ENSCPBG00000021965	YTHDC1	94	86.149	ENSSBOG00000022353	YTHDC1	96	85.221	Saimiri_boliviensis_boliviensis
ENSCPBG00000021965	YTHDC1	94	88.076	ENSSHAG00000002538	YTHDC1	91	89.915	Sarcophilus_harrisii
ENSCPBG00000021965	YTHDC1	94	69.531	ENSSFOG00015003298	ythdc1	92	70.952	Scleropages_formosus
ENSCPBG00000021965	YTHDC1	62	60.987	ENSSMAG00000009086	ythdc1	93	58.833	Scophthalmus_maximus
ENSCPBG00000021965	YTHDC1	55	67.076	ENSSDUG00000022008	ythdc1	93	59.636	Seriola_dumerili
ENSCPBG00000021965	YTHDC1	55	67.076	ENSSLDG00000007926	ythdc1	93	59.636	Seriola_lalandi_dorsalis
ENSCPBG00000021965	YTHDC1	75	88.719	ENSSARG00000010960	YTHDC1	91	88.528	Sorex_araneus
ENSCPBG00000021965	YTHDC1	94	89.206	ENSSPUG00000009357	YTHDC1	94	90.287	Sphenodon_punctatus
ENSCPBG00000021965	YTHDC1	63	62.500	ENSSPAG00000011449	ythdc1	93	59.153	Stegastes_partitus
ENSCPBG00000021965	YTHDC1	63	96.659	ENSSSCG00000035505	YTHDC1	91	86.438	Sus_scrofa
ENSCPBG00000021965	YTHDC1	94	94.240	ENSTGUG00000004452	-	91	94.884	Taeniopygia_guttata
ENSCPBG00000021965	YTHDC1	63	70.000	ENSTRUG00000010142	ythdc1	67	70.000	Takifugu_rubripes
ENSCPBG00000021965	YTHDC1	94	52.113	ENSTNIG00000013243	ythdc1	90	56.825	Tetraodon_nigroviridis
ENSCPBG00000021965	YTHDC1	94	80.878	ENSTBEG00000011546	YTHDC1	92	81.543	Tupaia_belangeri
ENSCPBG00000021965	YTHDC1	63	96.181	ENSTTRG00000005083	YTHDC1	92	85.608	Tursiops_truncatus
ENSCPBG00000021965	YTHDC1	90	87.040	ENSUAMG00000010388	YTHDC1	92	86.880	Ursus_americanus
ENSCPBG00000021965	YTHDC1	94	80.128	ENSUMAG00000013668	YTHDC1	99	80.764	Ursus_maritimus
ENSCPBG00000021965	YTHDC1	92	86.943	ENSVPAG00000009040	YTHDC1	89	86.943	Vicugna_pacos
ENSCPBG00000021965	YTHDC1	94	85.888	ENSVVUG00000005387	YTHDC1	92	86.741	Vulpes_vulpes
ENSCPBG00000021965	YTHDC1	94	78.185	ENSXETG00000017960	ythdc1	92	78.537	Xenopus_tropicalis
ENSCPBG00000021965	YTHDC1	62	58.628	ENSXMAG00000005196	ythdc1	93	57.011	Xiphophorus_maculatus