EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000022430 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 19302 bases
Position: chrKK083029.1:623705-643006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000031944	RRM_1	PF00076.22	9.4e-07	1	1
ENSCPBP00000031950	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037593	-	372	-	ENSCPBP00000031950	123 (aa)	-	-
ENSCPBT00000037587	-	321	-	ENSCPBP00000031944	106 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000022430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000022430	-	99	50.769	ENSCPBG00000026866	SREK1	99	50.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022430	-	72	90.123	ENSG00000116754	SRSF11	75	80.208	Homo_sapiens
ENSCPBG00000022430	-	88	56.522	ENSG00000153914	SREK1	83	68.675	Homo_sapiens
ENSCPBG00000022430	-	75	75.294	ENSAPOG00000007244	-	61	75.294	Acanthochromis_polyacanthus
ENSCPBG00000022430	-	72	75.309	ENSAPOG00000004488	-	75	75.309	Acanthochromis_polyacanthus
ENSCPBG00000022430	-	72	75.309	ENSACIG00000018075	-	75	75.309	Amphilophus_citrinellus
ENSCPBG00000022430	-	74	75.904	ENSACIG00000012348	-	87	75.904	Amphilophus_citrinellus
ENSCPBG00000022430	-	78	64.773	ENSACIG00000015055	-	96	51.969	Amphilophus_citrinellus
ENSCPBG00000022430	-	76	72.093	ENSAOCG00000000739	-	89	72.619	Amphiprion_ocellaris
ENSCPBG00000022430	-	78	62.500	ENSAOCG00000024368	-	84	66.265	Amphiprion_ocellaris
ENSCPBG00000022430	-	75	75.000	ENSAPEG00000003142	SRSF11	87	75.000	Amphiprion_percula
ENSCPBG00000022430	-	72	75.309	ENSAPEG00000003619	SRSF11	75	75.309	Amphiprion_percula
ENSCPBG00000022430	-	78	64.773	ENSAPEG00000002218	-	91	66.667	Amphiprion_percula
ENSCPBG00000022430	-	74	65.060	ENSATEG00000009464	-	93	63.529	Anabas_testudineus
ENSCPBG00000022430	-	72	75.309	ENSATEG00000007534	-	75	75.309	Anabas_testudineus
ENSCPBG00000022430	-	74	78.049	ENSATEG00000011691	srsf11	78	76.190	Anabas_testudineus
ENSCPBG00000022430	-	81	63.736	ENSANAG00000031358	SREK1	83	68.675	Aotus_nancymaae
ENSCPBG00000022430	-	76	74.419	ENSACLG00000000623	srsf11	88	74.419	Astatotilapia_calliptera
ENSCPBG00000022430	-	74	68.675	ENSBTAG00000007321	SREK1	83	68.675	Bos_taurus
ENSCPBG00000022430	-	84	63.158	ENSCJAG00000015950	SREK1	83	68.675	Callithrix_jacchus
ENSCPBG00000022430	-	88	56.522	ENSCAFG00020019449	-	83	68.675	Canis_lupus_dingo
ENSCPBG00000022430	-	72	90.123	ENSCAFG00020017255	-	87	81.633	Canis_lupus_dingo
ENSCPBG00000022430	-	74	68.675	ENSCHIG00000025052	-	83	68.675	Capra_hircus
ENSCPBG00000022430	-	72	90.123	ENSCHIG00000025295	SRSF11	78	82.609	Capra_hircus
ENSCPBG00000022430	-	72	85.185	ENSTSYG00000033270	-	80	69.828	Carlito_syrichta
ENSCPBG00000022430	-	88	56.522	ENSTSYG00000036957	SREK1	83	68.675	Carlito_syrichta
ENSCPBG00000022430	-	81	63.736	ENSCCAG00000020591	SREK1	83	68.675	Cebus_capucinus
ENSCPBG00000022430	-	74	68.675	ENSCATG00000031482	SREK1	83	68.675	Cercocebus_atys
ENSCPBG00000022430	-	74	68.675	ENSCANG00000030421	SREK1	83	68.675	Colobus_angolensis_palliatus
ENSCPBG00000022430	-	89	53.846	ENSCSEG00000013934	-	91	61.250	Cynoglossus_semilaevis
ENSCPBG00000022430	-	89	55.372	ENSCVAG00000002404	-	96	55.372	Cyprinodon_variegatus
ENSCPBG00000022430	-	74	74.699	ENSDARG00000098574	srsf11	91	74.699	Danio_rerio
ENSCPBG00000022430	-	89	54.701	ENSDORG00000023160	-	87	55.652	Dipodomys_ordii
ENSCPBG00000022430	-	88	56.522	ENSEASG00005006832	-	87	56.522	Equus_asinus_asinus
ENSCPBG00000022430	-	72	90.123	ENSEASG00005007847	SRSF11	81	83.696	Equus_asinus_asinus
ENSCPBG00000022430	-	88	56.522	ENSECAG00000035731	-	87	56.522	Equus_caballus
ENSCPBG00000022430	-	72	90.123	ENSFCAG00000034448	-	82	74.528	Felis_catus
ENSCPBG00000022430	-	74	67.470	ENSFCAG00000036884	-	83	67.470	Felis_catus
ENSCPBG00000022430	-	88	52.500	ENSFHEG00000020959	-	93	52.500	Fundulus_heteroclitus
ENSCPBG00000022430	-	86	62.500	ENSGALG00000043541	SREK1	97	59.375	Gallus_gallus
ENSCPBG00000022430	-	74	91.566	ENSGALG00000011305	SRSF11	59	74.107	Gallus_gallus
ENSCPBG00000022430	-	89	54.701	ENSGAFG00000001732	-	96	54.701	Gambusia_affinis
ENSCPBG00000022430	-	99	50.769	ENSGAGG00000006087	SREK1	99	50.769	Gopherus_agassizii
ENSCPBG00000022430	-	76	90.698	ENSGAGG00000022411	-	83	90.698	Gopherus_agassizii
ENSCPBG00000022430	-	88	56.522	ENSGGOG00000004737	SREK1	83	68.675	Gorilla_gorilla
ENSCPBG00000022430	-	100	51.471	ENSHBUG00000007082	-	99	51.471	Haplochromis_burtoni
ENSCPBG00000022430	-	72	64.198	ENSHCOG00000017228	-	85	60.870	Hippocampus_comes
ENSCPBG00000022430	-	75	76.471	ENSHCOG00000016860	-	87	76.471	Hippocampus_comes
ENSCPBG00000022430	-	74	68.675	ENSSTOG00000008850	SREK1	83	68.675	Ictidomys_tridecemlineatus
ENSCPBG00000022430	-	89	53.846	ENSJJAG00000008846	-	89	54.783	Jaculus_jaculus
ENSCPBG00000022430	-	76	75.581	ENSLBEG00000024167	srsf11	88	75.581	Labrus_bergylta
ENSCPBG00000022430	-	77	66.667	ENSLBEG00000022954	-	90	52.419	Labrus_bergylta
ENSCPBG00000022430	-	88	56.522	ENSMFAG00000039823	SREK1	83	68.675	Macaca_fascicularis
ENSCPBG00000022430	-	72	67.901	ENSMMUG00000014586	SREK1	75	68.293	Macaca_mulatta
ENSCPBG00000022430	-	74	68.675	ENSMNEG00000030723	SREK1	83	68.675	Macaca_nemestrina
ENSCPBG00000022430	-	74	68.675	ENSMLEG00000039078	SREK1	83	68.675	Mandrillus_leucophaeus
ENSCPBG00000022430	-	72	75.309	ENSMAMG00000015002	-	76	75.309	Mastacembelus_armatus
ENSCPBG00000022430	-	76	65.116	ENSMAMG00000003099	-	81	67.470	Mastacembelus_armatus
ENSCPBG00000022430	-	99	50.000	ENSMZEG00005005707	-	100	50.000	Maylandia_zebra
ENSCPBG00000022430	-	74	68.675	ENSMICG00000034959	SREK1	83	68.675	Microcebus_murinus
ENSCPBG00000022430	-	84	69.072	ENSMMOG00000016751	-	79	75.000	Mola_mola
ENSCPBG00000022430	-	75	73.810	ENSMMOG00000008877	-	83	73.810	Mola_mola
ENSCPBG00000022430	-	75	73.810	ENSMALG00000016608	srsf11	86	73.810	Monopterus_albus
ENSCPBG00000022430	-	78	63.636	ENSMALG00000017086	srek1	94	65.476	Monopterus_albus
ENSCPBG00000022430	-	73	90.244	MGP_CAROLIEiJ_G0025767	Srsf11	82	90.244	Mus_caroli
ENSCPBG00000022430	-	73	90.244	ENSMUSG00000055436	Srsf11	81	90.244	Mus_musculus
ENSCPBG00000022430	-	73	90.244	MGP_PahariEiJ_G0027217	Srsf11	82	90.244	Mus_pahari
ENSCPBG00000022430	-	73	90.244	MGP_SPRETEiJ_G0026719	Srsf11	82	90.244	Mus_spretus
ENSCPBG00000022430	-	88	55.652	ENSNGAG00000014631	-	87	55.652	Nannospalax_galili
ENSCPBG00000022430	-	98	51.493	ENSNBRG00000010656	-	98	51.493	Neolamprologus_brichardi
ENSCPBG00000022430	-	74	75.904	ENSNBRG00000020213	-	87	75.904	Neolamprologus_brichardi
ENSCPBG00000022430	-	74	68.675	ENSNLEG00000003827	SREK1	83	68.675	Nomascus_leucogenys
ENSCPBG00000022430	-	88	56.522	ENSODEG00000016218	-	83	65.882	Octodon_degus
ENSCPBG00000022430	-	69	65.385	ENSORLG00000002711	-	65	65.385	Oryzias_latipes
ENSCPBG00000022430	-	72	75.309	ENSORLG00000030366	-	72	75.309	Oryzias_latipes
ENSCPBG00000022430	-	72	75.309	ENSORLG00020009393	-	72	75.309	Oryzias_latipes_hni
ENSCPBG00000022430	-	88	52.174	ENSORLG00020012815	-	88	52.586	Oryzias_latipes_hni
ENSCPBG00000022430	-	72	75.309	ENSORLG00015009374	-	72	75.309	Oryzias_latipes_hsok
ENSCPBG00000022430	-	89	52.586	ENSORLG00015020455	-	91	52.586	Oryzias_latipes_hsok
ENSCPBG00000022430	-	88	56.522	ENSPPAG00000031605	SREK1	87	56.522	Pan_paniscus
ENSCPBG00000022430	-	74	67.470	ENSPPRG00000024617	SREK1	83	67.470	Panthera_pardus
ENSCPBG00000022430	-	74	67.470	ENSPTIG00000006608	SREK1	83	67.470	Panthera_tigris_altaica
ENSCPBG00000022430	-	88	56.522	ENSPTRG00000016936	SREK1	83	68.675	Pan_troglodytes
ENSCPBG00000022430	-	88	56.522	ENSPANG00000008953	SREK1	83	68.675	Papio_anubis
ENSCPBG00000022430	-	74	74.699	ENSPKIG00000021576	-	87	74.699	Paramormyrops_kingsleyae
ENSCPBG00000022430	-	74	75.904	ENSPMGG00000000954	-	78	75.904	Periophthalmus_magnuspinnatus
ENSCPBG00000022430	-	78	63.636	ENSPMGG00000017029	-	71	68.293	Periophthalmus_magnuspinnatus
ENSCPBG00000022430	-	77	68.966	ENSPMGG00000005045	-	73	72.289	Periophthalmus_magnuspinnatus
ENSCPBG00000022430	-	86	59.375	ENSPLAG00000008818	-	86	55.556	Poecilia_latipinna
ENSCPBG00000022430	-	86	59.375	ENSPLAG00000014609	-	86	55.556	Poecilia_latipinna
ENSCPBG00000022430	-	72	75.309	ENSPLAG00000009484	-	56	75.309	Poecilia_latipinna
ENSCPBG00000022430	-	74	75.904	ENSPMEG00000018837	srsf11	87	64.151	Poecilia_mexicana
ENSCPBG00000022430	-	72	75.309	ENSPMEG00000023453	-	56	75.309	Poecilia_mexicana
ENSCPBG00000022430	-	86	59.375	ENSPMEG00000006824	-	86	55.556	Poecilia_mexicana
ENSCPBG00000022430	-	86	59.375	ENSPMEG00000006607	-	86	55.556	Poecilia_mexicana
ENSCPBG00000022430	-	89	52.500	ENSPREG00000019922	-	96	52.500	Poecilia_reticulata
ENSCPBG00000022430	-	88	56.522	ENSPCOG00000026230	SREK1	83	68.675	Propithecus_coquereli
ENSCPBG00000022430	-	100	51.471	ENSPNYG00000007178	-	99	51.471	Pundamilia_nyererei
ENSCPBG00000022430	-	88	56.522	ENSRBIG00000033818	SREK1	83	68.675	Rhinopithecus_bieti
ENSCPBG00000022430	-	72	90.123	ENSRBIG00000042971	SRSF11	82	74.528	Rhinopithecus_bieti
ENSCPBG00000022430	-	74	68.675	ENSRROG00000017210	SREK1	83	68.675	Rhinopithecus_roxellana
ENSCPBG00000022430	-	72	90.123	ENSSBOG00000033461	SRSF11	82	74.528	Saimiri_boliviensis_boliviensis
ENSCPBG00000022430	-	81	63.736	ENSSBOG00000031230	SREK1	83	68.675	Saimiri_boliviensis_boliviensis
ENSCPBG00000022430	-	71	75.000	ENSSFOG00015016086	-	71	76.923	Scleropages_formosus
ENSCPBG00000022430	-	76	65.116	ENSSDUG00000010395	-	82	67.470	Seriola_dumerili
ENSCPBG00000022430	-	76	65.116	ENSSLDG00000016285	-	82	67.470	Seriola_lalandi_dorsalis
ENSCPBG00000022430	-	72	75.309	ENSSLDG00000012105	-	75	75.309	Seriola_lalandi_dorsalis
ENSCPBG00000022430	-	76	74.419	ENSSLDG00000015477	-	88	74.419	Seriola_lalandi_dorsalis
ENSCPBG00000022430	-	72	75.309	ENSSPAG00000016483	-	66	75.904	Stegastes_partitus
ENSCPBG00000022430	-	77	63.218	ENSSPAG00000022310	-	84	66.265	Stegastes_partitus
ENSCPBG00000022430	-	89	53.390	ENSTRUG00000022058	-	96	53.390	Takifugu_rubripes
ENSCPBG00000022430	-	72	67.901	ENSUAMG00000022662	-	76	67.470	Ursus_americanus
ENSCPBG00000022430	-	72	90.123	ENSUAMG00000008403	-	82	74.312	Ursus_americanus
ENSCPBG00000022430	-	88	56.522	ENSVVUG00000005888	-	83	68.675	Vulpes_vulpes
ENSCPBG00000022430	-	89	54.701	ENSXCOG00000017792	-	91	54.701	Xiphophorus_couchianus
ENSCPBG00000022430	-	79	75.281	ENSXCOG00000003220	-	72	77.108	Xiphophorus_couchianus
ENSCPBG00000022430	-	72	75.309	ENSXCOG00000015127	-	92	72.093	Xiphophorus_couchianus
ENSCPBG00000022430	-	89	54.701	ENSXMAG00000028210	-	96	54.701	Xiphophorus_maculatus
ENSCPBG00000022430	-	72	75.309	ENSXMAG00000019180	SRSF11	54	75.309	Xiphophorus_maculatus