EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000022465 (Gene tree)
Gene ID: 101946249
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 14843 bases
Position: chrKK088199.1:3767217-3782059
Accession: 10769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032150	DUF382	PF04037.13	1.1e-59	1	1
ENSCPBP00000032138	DUF382	PF04037.13	1.6e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037823	SF3B2-202	2172	-	ENSCPBP00000032150	723 (aa)	-	-
ENSCPBT00000037808	SF3B2-201	2694	-	ENSCPBP00000032138	897 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000022465's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022465	SF3B2	87	88.401	ENSG00000087365	SF3B2	99	96.825	Homo_sapiens
ENSCPBG00000022465	SF3B2	84	79.772	ENSAPOG00000001974	sf3b2	82	71.696	Acanthochromis_polyacanthus
ENSCPBG00000022465	SF3B2	87	88.576	ENSAMEG00000017206	SF3B2	100	74.043	Ailuropoda_melanoleuca
ENSCPBG00000022465	SF3B2	87	81.348	ENSACIG00000000624	sf3b2	87	73.677	Amphilophus_citrinellus
ENSCPBG00000022465	SF3B2	87	80.983	ENSAOCG00000009207	sf3b2	86	72.997	Amphiprion_ocellaris
ENSCPBG00000022465	SF3B2	87	81.661	ENSAPEG00000002762	sf3b2	84	73.092	Amphiprion_percula
ENSCPBG00000022465	SF3B2	100	66.197	ENSACAG00000008615	SF3B2	100	62.229	Anolis_carolinensis
ENSCPBG00000022465	SF3B2	87	88.401	ENSANAG00000029120	SF3B2	85	81.771	Aotus_nancymaae
ENSCPBG00000022465	SF3B2	87	80.408	ENSACLG00000014771	sf3b2	98	66.330	Astatotilapia_calliptera
ENSCPBG00000022465	SF3B2	88	79.499	ENSAMXG00000007929	sf3b2	93	77.059	Astyanax_mexicanus
ENSCPBG00000022465	SF3B2	87	88.558	ENSBTAG00000002778	SF3B2	100	74.015	Bos_taurus
ENSCPBG00000022465	SF3B2	74	52.313	WBGene00021004	sftb-2	91	51.056	Caenorhabditis_elegans
ENSCPBG00000022465	SF3B2	87	88.401	ENSCJAG00000001656	SF3B2	85	81.641	Callithrix_jacchus
ENSCPBG00000022465	SF3B2	87	88.558	ENSCAFG00000013033	SF3B2	100	74.066	Canis_familiaris
ENSCPBG00000022465	SF3B2	87	88.558	ENSCAFG00020015382	SF3B2	100	74.066	Canis_lupus_dingo
ENSCPBG00000022465	SF3B2	87	88.401	ENSCHIG00000011211	SF3B2	100	73.959	Capra_hircus
ENSCPBG00000022465	SF3B2	87	88.401	ENSTSYG00000000959	SF3B2	85	81.641	Carlito_syrichta
ENSCPBG00000022465	SF3B2	77	59.147	ENSCAPG00000006065	SF3B2	90	96.610	Cavia_aperea
ENSCPBG00000022465	SF3B2	76	87.050	ENSCPOG00000008294	SF3B2	83	78.134	Cavia_porcellus
ENSCPBG00000022465	SF3B2	87	88.401	ENSCCAG00000035256	SF3B2	85	81.641	Cebus_capucinus
ENSCPBG00000022465	SF3B2	87	88.401	ENSCATG00000042240	SF3B2	85	81.641	Cercocebus_atys
ENSCPBG00000022465	SF3B2	87	88.558	ENSCLAG00000016852	SF3B2	85	80.339	Chinchilla_lanigera
ENSCPBG00000022465	SF3B2	87	88.401	ENSCSAG00000008121	SF3B2	85	81.641	Chlorocebus_sabaeus
ENSCPBG00000022465	SF3B2	84	96.907	ENSCHOG00000001476	SF3B2	92	89.175	Choloepus_hoffmanni
ENSCPBG00000022465	SF3B2	73	67.925	ENSCING00000005665	-	99	61.417	Ciona_intestinalis
ENSCPBG00000022465	SF3B2	86	61.331	ENSCSAVG00000002029	-	99	60.987	Ciona_savignyi
ENSCPBG00000022465	SF3B2	87	88.401	ENSCANG00000039680	SF3B2	85	81.641	Colobus_angolensis_palliatus
ENSCPBG00000022465	SF3B2	87	88.558	ENSCGRG00001015741	Sf3b2	85	82.812	Cricetulus_griseus_chok1gshd
ENSCPBG00000022465	SF3B2	87	88.558	ENSCGRG00000018110	Sf3b2	85	82.812	Cricetulus_griseus_crigri
ENSCPBG00000022465	SF3B2	95	71.071	ENSCSEG00000000230	sf3b2	80	77.160	Cynoglossus_semilaevis
ENSCPBG00000022465	SF3B2	94	74.014	ENSCVAG00000003357	sf3b2	86	74.150	Cyprinodon_variegatus
ENSCPBG00000022465	SF3B2	88	80.280	ENSDARG00000018049	sf3b2	86	73.271	Danio_rerio
ENSCPBG00000022465	SF3B2	100	79.648	ENSDNOG00000009484	SF3B2	93	80.990	Dasypus_novemcinctus
ENSCPBG00000022465	SF3B2	87	88.401	ENSDORG00000002495	Sf3b2	84	81.250	Dipodomys_ordii
ENSCPBG00000022465	SF3B2	85	87.963	ENSETEG00000020284	SF3B2	85	87.963	Echinops_telfairi
ENSCPBG00000022465	SF3B2	87	68.550	ENSEBUG00000013703	sf3b2	72	70.076	Eptatretus_burgeri
ENSCPBG00000022465	SF3B2	87	88.715	ENSEASG00005004508	SF3B2	100	73.987	Equus_asinus_asinus
ENSCPBG00000022465	SF3B2	87	88.715	ENSECAG00000024461	SF3B2	100	73.987	Equus_caballus
ENSCPBG00000022465	SF3B2	60	96.610	ENSEEUG00000014278	-	60	96.610	Erinaceus_europaeus
ENSCPBG00000022465	SF3B2	95	77.165	ENSELUG00000005586	sf3b2	84	74.202	Esox_lucius
ENSCPBG00000022465	SF3B2	87	88.715	ENSFCAG00000013289	SF3B2	100	74.173	Felis_catus
ENSCPBG00000022465	SF3B2	88	75.472	ENSFALG00000014653	SF3B2	90	75.786	Ficedula_albicollis
ENSCPBG00000022465	SF3B2	87	88.125	ENSFDAG00000019806	SF3B2	85	80.649	Fukomys_damarensis
ENSCPBG00000022465	SF3B2	96	72.318	ENSFHEG00000020968	sf3b2	86	73.270	Fundulus_heteroclitus
ENSCPBG00000022465	SF3B2	87	79.467	ENSGMOG00000012131	sf3b2	96	81.132	Gadus_morhua
ENSCPBG00000022465	SF3B2	59	88.658	ENSGAFG00000001675	sf3b2	86	73.442	Gambusia_affinis
ENSCPBG00000022465	SF3B2	89	79.012	ENSGACG00000019012	sf3b2	98	79.969	Gasterosteus_aculeatus
ENSCPBG00000022465	SF3B2	100	91.991	ENSGAGG00000023916	SF3B2	100	91.991	Gopherus_agassizii
ENSCPBG00000022465	SF3B2	87	88.401	ENSGGOG00000028448	SF3B2	83	97.167	Gorilla_gorilla
ENSCPBG00000022465	SF3B2	87	80.878	ENSHBUG00000017349	sf3b2	98	66.330	Haplochromis_burtoni
ENSCPBG00000022465	SF3B2	87	88.401	ENSHGLG00000010807	SF3B2	85	80.339	Heterocephalus_glaber_female
ENSCPBG00000022465	SF3B2	87	88.401	ENSHGLG00100006361	SF3B2	85	81.641	Heterocephalus_glaber_male
ENSCPBG00000022465	SF3B2	87	77.813	ENSHCOG00000016203	sf3b2	98	63.494	Hippocampus_comes
ENSCPBG00000022465	SF3B2	88	78.538	ENSIPUG00000009383	sf3b2	82	72.951	Ictalurus_punctatus
ENSCPBG00000022465	SF3B2	87	88.401	ENSSTOG00000028892	SF3B2	85	81.510	Ictidomys_tridecemlineatus
ENSCPBG00000022465	SF3B2	87	88.401	ENSJJAG00000018193	Sf3b2	85	81.380	Jaculus_jaculus
ENSCPBG00000022465	SF3B2	73	88.679	ENSKMAG00000020181	sf3b2	98	65.385	Kryptolebias_marmoratus
ENSCPBG00000022465	SF3B2	88	79.781	ENSLBEG00000027739	sf3b2	89	79.589	Labrus_bergylta
ENSCPBG00000022465	SF3B2	87	83.491	ENSLACG00000010429	SF3B2	71	83.648	Latimeria_chalumnae
ENSCPBG00000022465	SF3B2	87	87.931	ENSLAFG00000002128	SF3B2	100	73.426	Loxodonta_africana
ENSCPBG00000022465	SF3B2	87	88.263	ENSMFAG00000003064	SF3B2	85	81.534	Macaca_fascicularis
ENSCPBG00000022465	SF3B2	87	83.072	ENSMMUG00000011743	SF3B2	85	77.214	Macaca_mulatta
ENSCPBG00000022465	SF3B2	87	88.401	ENSMNEG00000034437	SF3B2	85	81.641	Macaca_nemestrina
ENSCPBG00000022465	SF3B2	87	88.401	ENSMLEG00000029373	SF3B2	85	81.641	Mandrillus_leucophaeus
ENSCPBG00000022465	SF3B2	88	78.615	ENSMAMG00000014103	sf3b2	86	72.179	Mastacembelus_armatus
ENSCPBG00000022465	SF3B2	87	80.408	ENSMZEG00005020789	sf3b2	86	73.212	Maylandia_zebra
ENSCPBG00000022465	SF3B2	64	95.833	ENSMAUG00000017040	Sf3b2	100	95.833	Mesocricetus_auratus
ENSCPBG00000022465	SF3B2	87	88.245	ENSMICG00000008565	-	85	81.641	Microcebus_murinus
ENSCPBG00000022465	SF3B2	100	76.322	ENSMICG00000016942	-	86	78.010	Microcebus_murinus
ENSCPBG00000022465	SF3B2	87	88.245	ENSMOCG00000003136	Sf3b2	85	82.422	Microtus_ochrogaster
ENSCPBG00000022465	SF3B2	88	79.186	ENSMMOG00000012928	sf3b2	73	79.812	Mola_mola
ENSCPBG00000022465	SF3B2	88	83.229	ENSMODG00000025020	-	100	83.019	Monodelphis_domestica
ENSCPBG00000022465	SF3B2	88	88.665	ENSMODG00000008490	-	92	83.933	Monodelphis_domestica
ENSCPBG00000022465	SF3B2	95	71.216	ENSMALG00000015137	sf3b2	85	73.352	Monopterus_albus
ENSCPBG00000022465	SF3B2	87	86.677	MGP_CAROLIEiJ_G0022539	Sf3b2	85	80.990	Mus_caroli
ENSCPBG00000022465	SF3B2	87	88.245	ENSMUSG00000024853	Sf3b2	85	82.552	Mus_musculus
ENSCPBG00000022465	SF3B2	88	88.576	MGP_PahariEiJ_G0014036	Sf3b2	85	82.943	Mus_pahari
ENSCPBG00000022465	SF3B2	87	88.245	MGP_SPRETEiJ_G0023453	Sf3b2	85	82.422	Mus_spretus
ENSCPBG00000022465	SF3B2	87	88.558	ENSMPUG00000011349	SF3B2	100	74.066	Mustela_putorius_furo
ENSCPBG00000022465	SF3B2	87	88.401	ENSMLUG00000011136	SF3B2	100	73.589	Myotis_lucifugus
ENSCPBG00000022465	SF3B2	87	88.245	ENSNGAG00000012103	Sf3b2	85	82.445	Nannospalax_galili
ENSCPBG00000022465	SF3B2	87	84.389	ENSNLEG00000006007	SF3B2	85	77.907	Nomascus_leucogenys
ENSCPBG00000022465	SF3B2	79	91.193	ENSMEUG00000000019	SF3B2	89	91.193	Notamacropus_eugenii
ENSCPBG00000022465	SF3B2	100	76.180	ENSODEG00000017764	SF3B2	84	77.214	Octodon_degus
ENSCPBG00000022465	SF3B2	87	80.404	ENSONIG00000013068	sf3b2	87	72.877	Oreochromis_niloticus
ENSCPBG00000022465	SF3B2	88	79.353	ENSOANG00000012482	SF3B2	97	73.718	Ornithorhynchus_anatinus
ENSCPBG00000022465	SF3B2	60	56.881	ENSOCUG00000024154	-	99	50.185	Oryctolagus_cuniculus
ENSCPBG00000022465	SF3B2	100	75.302	ENSOCUG00000015722	-	74	87.147	Oryctolagus_cuniculus
ENSCPBG00000022465	SF3B2	98	71.597	ENSORLG00000008235	sf3b2	73	80.438	Oryzias_latipes
ENSCPBG00000022465	SF3B2	98	71.597	ENSORLG00020005357	sf3b2	75	80.282	Oryzias_latipes_hni
ENSCPBG00000022465	SF3B2	98	72.752	ENSORLG00015022454	sf3b2	95	70.937	Oryzias_latipes_hsok
ENSCPBG00000022465	SF3B2	89	78.626	ENSOMEG00000017480	sf3b2	76	79.385	Oryzias_melastigma
ENSCPBG00000022465	SF3B2	77	92.129	ENSOGAG00000005799	SF3B2	85	77.995	Otolemur_garnettii
ENSCPBG00000022465	SF3B2	100	76.170	ENSOARG00000002125	SF3B2	99	81.317	Ovis_aries
ENSCPBG00000022465	SF3B2	87	88.401	ENSPPAG00000007359	SF3B2	85	81.641	Pan_paniscus
ENSCPBG00000022465	SF3B2	87	88.715	ENSPPRG00000013334	SF3B2	100	74.173	Panthera_pardus
ENSCPBG00000022465	SF3B2	87	88.715	ENSPTIG00000015022	SF3B2	100	74.173	Panthera_tigris_altaica
ENSCPBG00000022465	SF3B2	87	88.401	ENSPTRG00000003912	SF3B2	85	81.641	Pan_troglodytes
ENSCPBG00000022465	SF3B2	87	88.401	ENSPANG00000008593	SF3B2	85	81.641	Papio_anubis
ENSCPBG00000022465	SF3B2	98	74.121	ENSPKIG00000016576	sf3b2	95	76.232	Paramormyrops_kingsleyae
ENSCPBG00000022465	SF3B2	99	97.476	ENSPSIG00000003158	SF3B2	100	96.078	Pelodiscus_sinensis
ENSCPBG00000022465	SF3B2	93	67.843	ENSPMGG00000000819	sf3b2	86	68.057	Periophthalmus_magnuspinnatus
ENSCPBG00000022465	SF3B2	87	88.558	ENSPEMG00000015437	Sf3b2	85	82.812	Peromyscus_maniculatus_bairdii
ENSCPBG00000022465	SF3B2	95	71.660	ENSPEMG00000015451	-	90	74.491	Peromyscus_maniculatus_bairdii
ENSCPBG00000022465	SF3B2	94	78.912	ENSPCIG00000008381	SF3B2	100	79.370	Phascolarctos_cinereus
ENSCPBG00000022465	SF3B2	93	73.406	ENSPFOG00000002552	sf3b2	86	73.577	Poecilia_formosa
ENSCPBG00000022465	SF3B2	93	73.677	ENSPLAG00000001471	sf3b2	86	73.848	Poecilia_latipinna
ENSCPBG00000022465	SF3B2	93	73.505	ENSPMEG00000013180	sf3b2	86	73.677	Poecilia_mexicana
ENSCPBG00000022465	SF3B2	93	73.978	ENSPREG00000002665	sf3b2	86	73.842	Poecilia_reticulata
ENSCPBG00000022465	SF3B2	55	83.582	ENSPPYG00000003034	-	78	75.000	Pongo_abelii
ENSCPBG00000022465	SF3B2	100	78.965	ENSPCAG00000005129	SF3B2	100	73.319	Procavia_capensis
ENSCPBG00000022465	SF3B2	87	88.245	ENSPCOG00000025375	SF3B2	85	81.901	Propithecus_coquereli
ENSCPBG00000022465	SF3B2	55	98.246	ENSPVAG00000005466	-	79	98.246	Pteropus_vampyrus
ENSCPBG00000022465	SF3B2	59	97.196	ENSPVAG00000016975	-	53	97.196	Pteropus_vampyrus
ENSCPBG00000022465	SF3B2	92	74.964	ENSPNYG00000023594	sf3b2	85	79.812	Pundamilia_nyererei
ENSCPBG00000022465	SF3B2	88	80.343	ENSPNAG00000001891	sf3b2	86	72.587	Pygocentrus_nattereri
ENSCPBG00000022465	SF3B2	87	86.520	ENSRNOG00000020412	Sf3b2	85	81.120	Rattus_norvegicus
ENSCPBG00000022465	SF3B2	87	88.401	ENSRBIG00000034065	SF3B2	85	81.771	Rhinopithecus_bieti
ENSCPBG00000022465	SF3B2	87	88.401	ENSRROG00000034496	SF3B2	85	81.771	Rhinopithecus_roxellana
ENSCPBG00000022465	SF3B2	52	31.750	YMR240C	-	61	36.691	Saccharomyces_cerevisiae
ENSCPBG00000022465	SF3B2	100	77.476	ENSSBOG00000026337	SF3B2	100	74.353	Saimiri_boliviensis_boliviensis
ENSCPBG00000022465	SF3B2	100	64.516	ENSSHAG00000018043	-	89	68.462	Sarcophilus_harrisii
ENSCPBG00000022465	SF3B2	88	84.867	ENSSHAG00000010933	-	100	74.236	Sarcophilus_harrisii
ENSCPBG00000022465	SF3B2	99	72.367	ENSSFOG00015021125	sf3b2	86	70.828	Scleropages_formosus
ENSCPBG00000022465	SF3B2	94	72.466	ENSSMAG00000004079	sf3b2	88	71.923	Scophthalmus_maximus
ENSCPBG00000022465	SF3B2	72	88.783	ENSSDUG00000008499	sf3b2	70	78.797	Seriola_dumerili
ENSCPBG00000022465	SF3B2	72	88.783	ENSSLDG00000006838	sf3b2	86	71.899	Seriola_lalandi_dorsalis
ENSCPBG00000022465	SF3B2	57	99.206	ENSSARG00000003707	-	57	99.206	Sorex_araneus
ENSCPBG00000022465	SF3B2	96	90.665	ENSSPUG00000009198	SF3B2	100	81.989	Sphenodon_punctatus
ENSCPBG00000022465	SF3B2	87	78.116	ENSSPAG00000004406	sf3b2	86	71.267	Stegastes_partitus
ENSCPBG00000022465	SF3B2	87	88.401	ENSSSCG00000012957	SF3B2	100	74.280	Sus_scrofa
ENSCPBG00000022465	SF3B2	99	67.671	ENSTRUG00000007611	sf3b2	99	67.684	Takifugu_rubripes
ENSCPBG00000022465	SF3B2	87	78.076	ENSTNIG00000007441	sf3b2	75	76.899	Tetraodon_nigroviridis
ENSCPBG00000022465	SF3B2	87	78.583	ENSTBEG00000004258	SF3B2	82	96.429	Tupaia_belangeri
ENSCPBG00000022465	SF3B2	87	88.558	ENSTTRG00000014339	SF3B2	100	74.173	Tursiops_truncatus
ENSCPBG00000022465	SF3B2	87	86.228	ENSUAMG00000020754	SF3B2	99	71.795	Ursus_americanus
ENSCPBG00000022465	SF3B2	87	88.715	ENSUMAG00000010994	SF3B2	100	74.173	Ursus_maritimus
ENSCPBG00000022465	SF3B2	68	95.763	ENSVPAG00000008695	SF3B2	72	95.763	Vicugna_pacos
ENSCPBG00000022465	SF3B2	87	88.401	ENSVVUG00000027029	SF3B2	100	73.959	Vulpes_vulpes
ENSCPBG00000022465	SF3B2	88	80.848	ENSXETG00000008422	sf3b2	81	81.073	Xenopus_tropicalis
ENSCPBG00000022465	SF3B2	98	73.324	ENSXCOG00000008943	sf3b2	97	73.538	Xiphophorus_couchianus
ENSCPBG00000022465	SF3B2	59	88.280	ENSXMAG00000008467	sf3b2	86	72.140	Xiphophorus_maculatus