EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000022466 (Gene tree)
Gene ID: 101943001
Gene Symbol: TRA2A
Alias: AWMS1|htra-2-alpha|tra2a
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 49471 bases
Position: chr2:9915366-9964836
Accession: 16645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032003	RRM_1	PF00076.22	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037652	TRA2A-201	1306	-	ENSCPBP00000032003	282 (aa)	XP_005290915	UPI000388AB2E

Gene Model

Click here to download ENSCPBG00000022466's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000022466	TRA2A	59	65.957	ENSCPBG00000007360	TRA2B	52	72.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022466	TRA2A	100	96.479	ENSG00000164548	TRA2A	100	97.238	Homo_sapiens
ENSCPBG00000022466	TRA2A	90	74.908	ENSAPOG00000017425	tra2a	90	74.539	Acanthochromis_polyacanthus
ENSCPBG00000022466	TRA2A	85	95.041	ENSAMEG00000003501	TRA2A	74	94.628	Ailuropoda_melanoleuca
ENSCPBG00000022466	TRA2A	53	88.667	ENSACIG00000001333	tra2a	79	88.667	Amphilophus_citrinellus
ENSCPBG00000022466	TRA2A	90	75.646	ENSAOCG00000015445	tra2a	90	75.277	Amphiprion_ocellaris
ENSCPBG00000022466	TRA2A	90	75.646	ENSAPEG00000018557	tra2a	90	75.277	Amphiprion_percula
ENSCPBG00000022466	TRA2A	90	77.574	ENSATEG00000000671	tra2a	90	77.206	Anabas_testudineus
ENSCPBG00000022466	TRA2A	95	97.753	ENSAPLG00000013689	TRA2A	100	97.753	Anas_platyrhynchos
ENSCPBG00000022466	TRA2A	100	97.535	ENSACAG00000013502	TRA2A	100	97.535	Anolis_carolinensis
ENSCPBG00000022466	TRA2A	90	68.235	ENSANAG00000035184	TRA2A	62	96.454	Aotus_nancymaae
ENSCPBG00000022466	TRA2A	90	78.229	ENSACLG00000024845	tra2a	90	77.860	Astatotilapia_calliptera
ENSCPBG00000022466	TRA2A	77	70.815	ENSAMXG00000005553	tra2a	100	75.536	Astyanax_mexicanus
ENSCPBG00000022466	TRA2A	100	96.820	ENSBTAG00000012622	TRA2A	100	96.820	Bos_taurus
ENSCPBG00000022466	TRA2A	94	93.962	ENSCJAG00000045802	-	96	93.307	Callithrix_jacchus
ENSCPBG00000022466	TRA2A	100	96.479	ENSCJAG00000001509	-	100	96.479	Callithrix_jacchus
ENSCPBG00000022466	TRA2A	99	96.786	ENSCAFG00000002788	TRA2A	100	96.786	Canis_familiaris
ENSCPBG00000022466	TRA2A	90	96.471	ENSCAFG00020002745	TRA2A	95	96.471	Canis_lupus_dingo
ENSCPBG00000022466	TRA2A	100	96.479	ENSTSYG00000000388	TRA2A	100	97.238	Carlito_syrichta
ENSCPBG00000022466	TRA2A	86	81.967	ENSCAPG00000017377	TRA2A	87	81.893	Cavia_aperea
ENSCPBG00000022466	TRA2A	100	96.479	ENSCPOG00000010739	TRA2A	100	96.479	Cavia_porcellus
ENSCPBG00000022466	TRA2A	100	96.479	ENSCCAG00000019576	TRA2A	100	97.238	Cebus_capucinus
ENSCPBG00000022466	TRA2A	100	96.479	ENSCATG00000041219	TRA2A	100	97.238	Cercocebus_atys
ENSCPBG00000022466	TRA2A	100	96.479	ENSCLAG00000007917	TRA2A	100	96.479	Chinchilla_lanigera
ENSCPBG00000022466	TRA2A	99	96.441	ENSCSAG00000014051	TRA2A	99	96.441	Chlorocebus_sabaeus
ENSCPBG00000022466	TRA2A	100	96.127	ENSCHOG00000001130	TRA2A	100	96.127	Choloepus_hoffmanni
ENSCPBG00000022466	TRA2A	100	96.479	ENSCANG00000031292	TRA2A	100	97.238	Colobus_angolensis_palliatus
ENSCPBG00000022466	TRA2A	100	95.105	ENSCGRG00001019980	Tra2a	100	95.105	Cricetulus_griseus_chok1gshd
ENSCPBG00000022466	TRA2A	85	93.061	ENSCGRG00000006087	Tra2a	89	92.245	Cricetulus_griseus_crigri
ENSCPBG00000022466	TRA2A	90	70.182	ENSCSEG00000012193	tra2a	90	70.545	Cynoglossus_semilaevis
ENSCPBG00000022466	TRA2A	56	82.390	ENSDARG00000007863	tra2a	90	76.471	Danio_rerio
ENSCPBG00000022466	TRA2A	100	96.127	ENSDNOG00000039446	TRA2A	100	96.127	Dasypus_novemcinctus
ENSCPBG00000022466	TRA2A	100	95.775	ENSDORG00000009361	Tra2a	100	95.775	Dipodomys_ordii
ENSCPBG00000022466	TRA2A	100	79.931	ENSETEG00000007250	TRA2A	100	79.931	Echinops_telfairi
ENSCPBG00000022466	TRA2A	100	96.820	ENSEASG00005022002	TRA2A	100	96.820	Equus_asinus_asinus
ENSCPBG00000022466	TRA2A	100	96.820	ENSECAG00000011508	TRA2A	100	96.820	Equus_caballus
ENSCPBG00000022466	TRA2A	90	94.118	ENSEEUG00000015674	TRA2A	90	93.725	Erinaceus_europaeus
ENSCPBG00000022466	TRA2A	77	74.370	ENSELUG00000005846	tra2a	91	67.893	Esox_lucius
ENSCPBG00000022466	TRA2A	100	96.820	ENSFCAG00000005361	TRA2A	100	96.820	Felis_catus
ENSCPBG00000022466	TRA2A	96	97.037	ENSFALG00000009605	TRA2A	100	97.037	Ficedula_albicollis
ENSCPBG00000022466	TRA2A	100	95.789	ENSFDAG00000004949	TRA2A	100	95.789	Fukomys_damarensis
ENSCPBG00000022466	TRA2A	90	68.817	ENSGMOG00000013740	tra2a	91	69.176	Gadus_morhua
ENSCPBG00000022466	TRA2A	100	97.872	ENSGALG00000010973	TRA2A	100	97.872	Gallus_gallus
ENSCPBG00000022466	TRA2A	90	73.462	ENSGACG00000006878	tra2a	89	71.923	Gasterosteus_aculeatus
ENSCPBG00000022466	TRA2A	100	99.291	ENSGAGG00000005793	TRA2A	100	99.291	Gopherus_agassizii
ENSCPBG00000022466	TRA2A	100	96.479	ENSGGOG00000009053	TRA2A	100	96.479	Gorilla_gorilla
ENSCPBG00000022466	TRA2A	90	78.967	ENSHBUG00000018234	tra2a	90	78.598	Haplochromis_burtoni
ENSCPBG00000022466	TRA2A	100	96.479	ENSHGLG00000012168	TRA2A	100	96.479	Heterocephalus_glaber_female
ENSCPBG00000022466	TRA2A	100	96.479	ENSHGLG00100014577	TRA2A	100	96.479	Heterocephalus_glaber_male
ENSCPBG00000022466	TRA2A	63	64.921	ENSHCOG00000006314	tra2a	85	64.706	Hippocampus_comes
ENSCPBG00000022466	TRA2A	63	62.371	ENSHCOG00000006320	tra2a	52	61.905	Hippocampus_comes
ENSCPBG00000022466	TRA2A	100	96.479	ENSSTOG00000012073	TRA2A	100	96.479	Ictidomys_tridecemlineatus
ENSCPBG00000022466	TRA2A	100	95.775	ENSJJAG00000022787	Tra2a	100	95.775	Jaculus_jaculus
ENSCPBG00000022466	TRA2A	85	73.764	ENSLBEG00000005297	tra2a	63	74.468	Labrus_bergylta
ENSCPBG00000022466	TRA2A	90	86.328	ENSLACG00000014765	TRA2A	90	85.938	Latimeria_chalumnae
ENSCPBG00000022466	TRA2A	77	71.171	ENSLOCG00000009558	-	58	76.879	Lepisosteus_oculatus
ENSCPBG00000022466	TRA2A	90	77.491	ENSLOCG00000011615	-	90	77.122	Lepisosteus_oculatus
ENSCPBG00000022466	TRA2A	100	96.140	ENSLAFG00000006598	TRA2A	100	96.140	Loxodonta_africana
ENSCPBG00000022466	TRA2A	100	96.479	ENSMFAG00000043211	TRA2A	100	97.238	Macaca_fascicularis
ENSCPBG00000022466	TRA2A	100	96.479	ENSMMUG00000006286	TRA2A	100	96.479	Macaca_mulatta
ENSCPBG00000022466	TRA2A	100	96.479	ENSMNEG00000040670	TRA2A	100	97.238	Macaca_nemestrina
ENSCPBG00000022466	TRA2A	100	96.479	ENSMLEG00000032154	TRA2A	100	97.238	Mandrillus_leucophaeus
ENSCPBG00000022466	TRA2A	77	78.723	ENSMAMG00000008575	tra2a	90	78.632	Mastacembelus_armatus
ENSCPBG00000022466	TRA2A	90	78.229	ENSMZEG00005009142	tra2a	90	77.860	Maylandia_zebra
ENSCPBG00000022466	TRA2A	96	97.778	ENSMGAG00000010514	TRA2A	100	97.778	Meleagris_gallopavo
ENSCPBG00000022466	TRA2A	100	75.532	ENSMICG00000036849	-	88	75.099	Microcebus_murinus
ENSCPBG00000022466	TRA2A	100	96.127	ENSMICG00000043639	-	100	97.238	Microcebus_murinus
ENSCPBG00000022466	TRA2A	71	79.803	ENSMOCG00000006467	-	97	78.818	Microtus_ochrogaster
ENSCPBG00000022466	TRA2A	62	90.857	ENSMOCG00000010249	-	63	90.303	Microtus_ochrogaster
ENSCPBG00000022466	TRA2A	87	80.488	ENSMMOG00000020174	tra2a	83	79.167	Mola_mola
ENSCPBG00000022466	TRA2A	100	97.535	ENSMODG00000000807	TRA2A	100	97.535	Monodelphis_domestica
ENSCPBG00000022466	TRA2A	85	74.427	ENSMALG00000020875	tra2a	90	73.913	Monopterus_albus
ENSCPBG00000022466	TRA2A	100	95.105	ENSMUSG00000029817	Tra2a	100	95.105	Mus_musculus
ENSCPBG00000022466	TRA2A	90	92.996	MGP_PahariEiJ_G0022115	Tra2a	90	92.218	Mus_pahari
ENSCPBG00000022466	TRA2A	100	95.105	MGP_SPRETEiJ_G0029368	Tra2a	100	95.105	Mus_spretus
ENSCPBG00000022466	TRA2A	100	96.466	ENSMPUG00000013480	TRA2A	100	96.466	Mustela_putorius_furo
ENSCPBG00000022466	TRA2A	90	93.750	ENSMLUG00000013972	TRA2A	90	93.359	Myotis_lucifugus
ENSCPBG00000022466	TRA2A	100	95.070	ENSNGAG00000023805	Tra2a	100	95.070	Nannospalax_galili
ENSCPBG00000022466	TRA2A	53	88.235	ENSNBRG00000005992	tra2a	73	88.235	Neolamprologus_brichardi
ENSCPBG00000022466	TRA2A	100	96.479	ENSNLEG00000014794	TRA2A	100	97.238	Nomascus_leucogenys
ENSCPBG00000022466	TRA2A	63	68.889	ENSNLEG00000029659	-	88	74.834	Nomascus_leucogenys
ENSCPBG00000022466	TRA2A	100	97.193	ENSMEUG00000001202	TRA2A	100	97.193	Notamacropus_eugenii
ENSCPBG00000022466	TRA2A	100	95.070	ENSOPRG00000007606	TRA2A	90	92.157	Ochotona_princeps
ENSCPBG00000022466	TRA2A	100	96.479	ENSODEG00000008335	TRA2A	100	96.479	Octodon_degus
ENSCPBG00000022466	TRA2A	90	78.102	ENSONIG00000004503	tra2a	90	77.737	Oreochromis_niloticus
ENSCPBG00000022466	TRA2A	89	88.506	ENSOANG00000014202	TRA2A	90	86.538	Ornithorhynchus_anatinus
ENSCPBG00000022466	TRA2A	100	96.127	ENSOCUG00000024139	TRA2A	100	96.127	Oryctolagus_cuniculus
ENSCPBG00000022466	TRA2A	82	70.996	ENSORLG00000022191	tra2a	60	75.758	Oryzias_latipes
ENSCPBG00000022466	TRA2A	82	70.563	ENSORLG00020003490	tra2a	60	75.152	Oryzias_latipes_hni
ENSCPBG00000022466	TRA2A	82	70.130	ENSORLG00015015485	tra2a	60	74.545	Oryzias_latipes_hsok
ENSCPBG00000022466	TRA2A	82	69.264	ENSOMEG00000017864	tra2a	60	73.333	Oryzias_melastigma
ENSCPBG00000022466	TRA2A	99	93.617	ENSOGAG00000009733	TRA2A	99	93.617	Otolemur_garnettii
ENSCPBG00000022466	TRA2A	90	85.271	ENSOARG00000002323	-	89	84.496	Ovis_aries
ENSCPBG00000022466	TRA2A	90	95.276	ENSOARG00000013147	TRA2A	90	94.882	Ovis_aries
ENSCPBG00000022466	TRA2A	99	96.441	ENSPPAG00000034382	TRA2A	99	97.191	Pan_paniscus
ENSCPBG00000022466	TRA2A	100	96.820	ENSPPRG00000015216	TRA2A	100	96.820	Panthera_pardus
ENSCPBG00000022466	TRA2A	100	96.820	ENSPTIG00000021114	TRA2A	100	96.820	Panthera_tigris_altaica
ENSCPBG00000022466	TRA2A	100	96.479	ENSPTRG00000046098	-	100	96.479	Pan_troglodytes
ENSCPBG00000022466	TRA2A	100	96.479	ENSPTRG00000018988	TRA2A	100	97.238	Pan_troglodytes
ENSCPBG00000022466	TRA2A	100	96.479	ENSPANG00000014541	TRA2A	100	96.479	Papio_anubis
ENSCPBG00000022466	TRA2A	90	76.015	ENSPKIG00000012298	tra2a	90	74.908	Paramormyrops_kingsleyae
ENSCPBG00000022466	TRA2A	99	96.429	ENSPSIG00000014993	TRA2A	100	96.429	Pelodiscus_sinensis
ENSCPBG00000022466	TRA2A	100	95.439	ENSPEMG00000008564	-	100	95.439	Peromyscus_maniculatus_bairdii
ENSCPBG00000022466	TRA2A	62	69.318	ENSPMAG00000007947	tra2a	57	70.000	Petromyzon_marinus
ENSCPBG00000022466	TRA2A	100	97.535	ENSPCIG00000007917	TRA2A	100	97.535	Phascolarctos_cinereus
ENSCPBG00000022466	TRA2A	100	96.479	ENSPPYG00000017728	TRA2A	100	96.479	Pongo_abelii
ENSCPBG00000022466	TRA2A	99	95.390	ENSPCAG00000004148	TRA2A	100	95.390	Procavia_capensis
ENSCPBG00000022466	TRA2A	100	82.979	ENSPCOG00000020465	TRA2A	100	82.979	Propithecus_coquereli
ENSCPBG00000022466	TRA2A	100	95.789	ENSPVAG00000011298	TRA2A	100	95.789	Pteropus_vampyrus
ENSCPBG00000022466	TRA2A	53	86.538	ENSPNYG00000020134	tra2a	76	86.538	Pundamilia_nyererei
ENSCPBG00000022466	TRA2A	90	73.432	ENSPNAG00000000482	tra2a	90	73.801	Pygocentrus_nattereri
ENSCPBG00000022466	TRA2A	100	95.105	ENSRNOG00000009156	Tra2a	100	95.105	Rattus_norvegicus
ENSCPBG00000022466	TRA2A	100	96.831	ENSRROG00000030758	TRA2A	100	97.238	Rhinopithecus_roxellana
ENSCPBG00000022466	TRA2A	100	96.479	ENSSBOG00000031562	TRA2A	100	97.238	Saimiri_boliviensis_boliviensis
ENSCPBG00000022466	TRA2A	89	94.048	ENSSHAG00000005727	TRA2A	88	93.651	Sarcophilus_harrisii
ENSCPBG00000022466	TRA2A	90	80.632	ENSSFOG00015014004	tra2a	90	74.908	Scleropages_formosus
ENSCPBG00000022466	TRA2A	93	73.759	ENSSMAG00000014242	tra2a	90	73.063	Scophthalmus_maximus
ENSCPBG00000022466	TRA2A	90	82.171	ENSSDUG00000005610	tra2a	89	81.783	Seriola_dumerili
ENSCPBG00000022466	TRA2A	53	89.404	ENSSLDG00000025577	tra2a	81	88.742	Seriola_lalandi_dorsalis
ENSCPBG00000022466	TRA2A	70	95.455	ENSSARG00000012900	TRA2A	90	72.441	Sorex_araneus
ENSCPBG00000022466	TRA2A	100	98.258	ENSSPUG00000006143	TRA2A	100	98.258	Sphenodon_punctatus
ENSCPBG00000022466	TRA2A	90	78.309	ENSSPAG00000004184	tra2a	90	78.676	Stegastes_partitus
ENSCPBG00000022466	TRA2A	100	96.820	ENSSSCG00000015387	TRA2A	100	96.820	Sus_scrofa
ENSCPBG00000022466	TRA2A	60	91.667	ENSTGUG00000002795	TRA2A	62	90.909	Taeniopygia_guttata
ENSCPBG00000022466	TRA2A	100	81.338	ENSTBEG00000013773	TRA2A	100	81.338	Tupaia_belangeri
ENSCPBG00000022466	TRA2A	100	96.466	ENSTTRG00000008922	TRA2A	100	96.466	Tursiops_truncatus
ENSCPBG00000022466	TRA2A	63	95.604	ENSUMAG00000001181	TRA2A	94	95.604	Ursus_maritimus
ENSCPBG00000022466	TRA2A	100	83.039	ENSVPAG00000001829	TRA2A	100	83.039	Vicugna_pacos
ENSCPBG00000022466	TRA2A	100	96.820	ENSVVUG00000001045	TRA2A	100	96.820	Vulpes_vulpes
ENSCPBG00000022466	TRA2A	90	83.019	ENSXETG00000007397	tra2a	90	83.019	Xenopus_tropicalis