EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000022626 (Gene tree)
Gene ID: 101935645
Gene Symbol: EXOSC2
Alias: RRP4|Rrp4p|hRrp4p|p7
Full Name: exosome component 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 12376 bases
Position: chrKK082938.1:4449065-4461440
Accession: 17097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032267	ECR1_N	PF14382.6	3.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037956	EXOSC2-201	1888	XM_005293332	ENSCPBP00000032267	294 (aa)	XP_005293389	UPI000388B619

Gene Model

Click here to download ENSCPBG00000022626's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022626	EXOSC2	99	86.986	ENSG00000130713	EXOSC2	99	86.986	Homo_sapiens
ENSCPBG00000022626	EXOSC2	90	78.868	ENSAPOG00000008861	exosc2	97	78.868	Acanthochromis_polyacanthus
ENSCPBG00000022626	EXOSC2	99	86.644	ENSAMEG00000016239	EXOSC2	99	86.644	Ailuropoda_melanoleuca
ENSCPBG00000022626	EXOSC2	99	76.712	ENSACIG00000019054	exosc2	99	76.712	Amphilophus_citrinellus
ENSCPBG00000022626	EXOSC2	99	77.740	ENSAOCG00000008577	exosc2	99	77.740	Amphiprion_ocellaris
ENSCPBG00000022626	EXOSC2	99	77.740	ENSAOCG00000004983	exosc2	99	77.740	Amphiprion_ocellaris
ENSCPBG00000022626	EXOSC2	99	77.740	ENSAPEG00000014088	exosc2	99	77.740	Amphiprion_percula
ENSCPBG00000022626	EXOSC2	99	77.397	ENSATEG00000018680	exosc2	99	77.397	Anabas_testudineus
ENSCPBG00000022626	EXOSC2	93	90.876	ENSAPLG00000012516	EXOSC2	94	90.876	Anas_platyrhynchos
ENSCPBG00000022626	EXOSC2	99	89.456	ENSACAG00000002706	EXOSC2	99	89.456	Anolis_carolinensis
ENSCPBG00000022626	EXOSC2	99	77.055	ENSACLG00000013613	exosc2	99	77.055	Astatotilapia_calliptera
ENSCPBG00000022626	EXOSC2	99	80.612	ENSAMXG00000042605	exosc2	99	80.612	Astyanax_mexicanus
ENSCPBG00000022626	EXOSC2	99	86.644	ENSBTAG00000048071	EXOSC2	99	86.644	Bos_taurus
ENSCPBG00000022626	EXOSC2	90	43.820	WBGene00022232	exos-2	88	43.820	Caenorhabditis_elegans
ENSCPBG00000022626	EXOSC2	99	86.986	ENSCJAG00000020537	EXOSC2	99	86.986	Callithrix_jacchus
ENSCPBG00000022626	EXOSC2	99	85.567	ENSCAFG00000019941	EXOSC2	99	85.567	Canis_familiaris
ENSCPBG00000022626	EXOSC2	99	85.616	ENSCAFG00020024047	EXOSC2	99	85.616	Canis_lupus_dingo
ENSCPBG00000022626	EXOSC2	99	86.986	ENSCHIG00000021398	EXOSC2	99	86.986	Capra_hircus
ENSCPBG00000022626	EXOSC2	99	86.986	ENSTSYG00000001805	EXOSC2	99	86.986	Carlito_syrichta
ENSCPBG00000022626	EXOSC2	99	82.877	ENSCPOG00000005902	EXOSC2	99	82.877	Cavia_porcellus
ENSCPBG00000022626	EXOSC2	99	86.986	ENSCCAG00000019749	EXOSC2	99	86.986	Cebus_capucinus
ENSCPBG00000022626	EXOSC2	99	86.301	ENSCATG00000025389	-	99	86.301	Cercocebus_atys
ENSCPBG00000022626	EXOSC2	99	87.671	ENSCLAG00000006195	EXOSC2	99	87.671	Chinchilla_lanigera
ENSCPBG00000022626	EXOSC2	99	86.301	ENSCSAG00000014760	EXOSC2	99	86.301	Chlorocebus_sabaeus
ENSCPBG00000022626	EXOSC2	99	85.959	ENSCHOG00000000858	EXOSC2	99	85.959	Choloepus_hoffmanni
ENSCPBG00000022626	EXOSC2	97	63.103	ENSCING00000014934	-	95	63.103	Ciona_intestinalis
ENSCPBG00000022626	EXOSC2	92	63.538	ENSCSAVG00000003684	-	100	63.538	Ciona_savignyi
ENSCPBG00000022626	EXOSC2	100	79.252	ENSCANG00000029298	-	100	79.252	Colobus_angolensis_palliatus
ENSCPBG00000022626	EXOSC2	99	86.301	ENSCANG00000039828	-	99	86.301	Colobus_angolensis_palliatus
ENSCPBG00000022626	EXOSC2	99	86.644	ENSCGRG00001013981	Exosc2	99	86.644	Cricetulus_griseus_chok1gshd
ENSCPBG00000022626	EXOSC2	99	86.644	ENSCGRG00000017629	Exosc2	99	86.644	Cricetulus_griseus_crigri
ENSCPBG00000022626	EXOSC2	99	76.712	ENSCSEG00000016539	exosc2	99	76.712	Cynoglossus_semilaevis
ENSCPBG00000022626	EXOSC2	99	75.342	ENSCVAG00000022260	exosc2	99	75.342	Cyprinodon_variegatus
ENSCPBG00000022626	EXOSC2	99	77.551	ENSDARG00000028688	exosc2	99	77.551	Danio_rerio
ENSCPBG00000022626	EXOSC2	90	88.346	ENSDNOG00000025767	-	99	88.346	Dasypus_novemcinctus
ENSCPBG00000022626	EXOSC2	99	86.644	ENSDORG00000009238	Exosc2	99	86.644	Dipodomys_ordii
ENSCPBG00000022626	EXOSC2	98	59.247	FBgn0034879	Rrp4	97	59.589	Drosophila_melanogaster
ENSCPBG00000022626	EXOSC2	94	70.758	ENSETEG00000016130	-	100	70.758	Echinops_telfairi
ENSCPBG00000022626	EXOSC2	99	87.671	ENSEASG00005008475	EXOSC2	86	87.671	Equus_asinus_asinus
ENSCPBG00000022626	EXOSC2	99	87.671	ENSECAG00000007897	EXOSC2	86	87.671	Equus_caballus
ENSCPBG00000022626	EXOSC2	99	78.571	ENSELUG00000013641	exosc2	99	78.571	Esox_lucius
ENSCPBG00000022626	EXOSC2	99	86.301	ENSFCAG00000025936	EXOSC2	99	86.301	Felis_catus
ENSCPBG00000022626	EXOSC2	100	83.333	ENSFALG00000001446	EXOSC2	100	83.333	Ficedula_albicollis
ENSCPBG00000022626	EXOSC2	99	85.274	ENSFDAG00000017196	EXOSC2	99	85.274	Fukomys_damarensis
ENSCPBG00000022626	EXOSC2	99	76.027	ENSFHEG00000018571	exosc2	99	76.027	Fundulus_heteroclitus
ENSCPBG00000022626	EXOSC2	99	73.973	ENSGMOG00000011785	exosc2	99	73.973	Gadus_morhua
ENSCPBG00000022626	EXOSC2	100	88.435	ENSGALG00000040373	EXOSC2	100	88.435	Gallus_gallus
ENSCPBG00000022626	EXOSC2	99	75.945	ENSGAFG00000010283	exosc2	99	75.945	Gambusia_affinis
ENSCPBG00000022626	EXOSC2	99	76.027	ENSGACG00000016805	exosc2	99	76.027	Gasterosteus_aculeatus
ENSCPBG00000022626	EXOSC2	87	98.039	ENSGAGG00000021026	EXOSC2	96	98.039	Gopherus_agassizii
ENSCPBG00000022626	EXOSC2	99	86.301	ENSGGOG00000010578	EXOSC2	99	86.301	Gorilla_gorilla
ENSCPBG00000022626	EXOSC2	99	77.397	ENSHBUG00000022437	exosc2	99	77.397	Haplochromis_burtoni
ENSCPBG00000022626	EXOSC2	99	86.644	ENSHGLG00000012834	EXOSC2	99	86.644	Heterocephalus_glaber_female
ENSCPBG00000022626	EXOSC2	99	86.644	ENSHGLG00100007092	EXOSC2	99	86.644	Heterocephalus_glaber_male
ENSCPBG00000022626	EXOSC2	99	76.027	ENSHCOG00000019130	exosc2	99	76.027	Hippocampus_comes
ENSCPBG00000022626	EXOSC2	99	78.157	ENSIPUG00000015397	exosc2	99	78.157	Ictalurus_punctatus
ENSCPBG00000022626	EXOSC2	99	87.329	ENSSTOG00000005999	EXOSC2	99	87.329	Ictidomys_tridecemlineatus
ENSCPBG00000022626	EXOSC2	99	87.329	ENSJJAG00000003188	Exosc2	99	87.329	Jaculus_jaculus
ENSCPBG00000022626	EXOSC2	99	76.289	ENSKMAG00000017397	exosc2	99	76.289	Kryptolebias_marmoratus
ENSCPBG00000022626	EXOSC2	99	74.658	ENSLBEG00000019269	exosc2	99	74.658	Labrus_bergylta
ENSCPBG00000022626	EXOSC2	99	83.276	ENSLACG00000015530	EXOSC2	99	83.276	Latimeria_chalumnae
ENSCPBG00000022626	EXOSC2	99	87.372	ENSLAFG00000006984	EXOSC2	99	87.372	Loxodonta_africana
ENSCPBG00000022626	EXOSC2	99	73.973	ENSMFAG00000034160	-	84	73.973	Macaca_fascicularis
ENSCPBG00000022626	EXOSC2	99	86.301	ENSMFAG00000000597	-	99	86.301	Macaca_fascicularis
ENSCPBG00000022626	EXOSC2	99	83.219	ENSMMUG00000012498	EXOSC2	99	83.219	Macaca_mulatta
ENSCPBG00000022626	EXOSC2	99	75.000	ENSMNEG00000028704	-	91	75.000	Macaca_nemestrina
ENSCPBG00000022626	EXOSC2	99	86.301	ENSMNEG00000031861	-	99	86.301	Macaca_nemestrina
ENSCPBG00000022626	EXOSC2	99	73.973	ENSMLEG00000029891	-	91	73.973	Mandrillus_leucophaeus
ENSCPBG00000022626	EXOSC2	99	86.301	ENSMLEG00000042587	-	99	86.301	Mandrillus_leucophaeus
ENSCPBG00000022626	EXOSC2	99	76.712	ENSMAMG00000012466	exosc2	99	76.712	Mastacembelus_armatus
ENSCPBG00000022626	EXOSC2	99	76.712	ENSMZEG00005018737	exosc2	99	76.712	Maylandia_zebra
ENSCPBG00000022626	EXOSC2	100	88.095	ENSMGAG00000005450	EXOSC2	100	88.095	Meleagris_gallopavo
ENSCPBG00000022626	EXOSC2	99	86.986	ENSMAUG00000008299	Exosc2	99	86.986	Mesocricetus_auratus
ENSCPBG00000022626	EXOSC2	99	87.671	ENSMICG00000015495	EXOSC2	99	87.671	Microcebus_murinus
ENSCPBG00000022626	EXOSC2	99	86.986	ENSMOCG00000008262	Exosc2	99	86.986	Microtus_ochrogaster
ENSCPBG00000022626	EXOSC2	99	77.397	ENSMMOG00000009616	exosc2	99	77.397	Mola_mola
ENSCPBG00000022626	EXOSC2	99	87.329	ENSMODG00000012114	EXOSC2	99	87.329	Monodelphis_domestica
ENSCPBG00000022626	EXOSC2	99	77.397	ENSMALG00000022132	exosc2	99	77.397	Monopterus_albus
ENSCPBG00000022626	EXOSC2	99	86.301	MGP_CAROLIEiJ_G0023415	Exosc2	99	86.301	Mus_caroli
ENSCPBG00000022626	EXOSC2	99	86.301	ENSMUSG00000039356	Exosc2	99	86.301	Mus_musculus
ENSCPBG00000022626	EXOSC2	99	85.959	MGP_PahariEiJ_G0024872	Exosc2	99	85.959	Mus_pahari
ENSCPBG00000022626	EXOSC2	99	86.301	MGP_SPRETEiJ_G0024332	Exosc2	99	86.301	Mus_spretus
ENSCPBG00000022626	EXOSC2	99	86.301	ENSMPUG00000012686	EXOSC2	99	86.301	Mustela_putorius_furo
ENSCPBG00000022626	EXOSC2	99	87.075	ENSMLUG00000008776	EXOSC2	99	87.075	Myotis_lucifugus
ENSCPBG00000022626	EXOSC2	99	86.986	ENSNGAG00000019383	Exosc2	99	86.986	Nannospalax_galili
ENSCPBG00000022626	EXOSC2	99	77.055	ENSNBRG00000005453	exosc2	99	77.055	Neolamprologus_brichardi
ENSCPBG00000022626	EXOSC2	99	86.986	ENSNLEG00000012533	EXOSC2	99	86.986	Nomascus_leucogenys
ENSCPBG00000022626	EXOSC2	99	68.836	ENSMEUG00000000795	EXOSC2	99	68.836	Notamacropus_eugenii
ENSCPBG00000022626	EXOSC2	56	89.024	ENSOPRG00000008688	EXOSC2	56	89.024	Ochotona_princeps
ENSCPBG00000022626	EXOSC2	99	84.932	ENSODEG00000016880	-	99	84.932	Octodon_degus
ENSCPBG00000022626	EXOSC2	86	88.976	ENSODEG00000019513	-	100	88.976	Octodon_degus
ENSCPBG00000022626	EXOSC2	99	77.055	ENSONIG00000014086	exosc2	99	77.055	Oreochromis_niloticus
ENSCPBG00000022626	EXOSC2	99	84.589	ENSOANG00000001044	EXOSC2	99	84.589	Ornithorhynchus_anatinus
ENSCPBG00000022626	EXOSC2	99	86.986	ENSOCUG00000007138	EXOSC2	99	86.986	Oryctolagus_cuniculus
ENSCPBG00000022626	EXOSC2	99	76.712	ENSORLG00000007443	exosc2	99	76.712	Oryzias_latipes
ENSCPBG00000022626	EXOSC2	99	76.370	ENSORLG00020018902	exosc2	99	76.370	Oryzias_latipes_hni
ENSCPBG00000022626	EXOSC2	99	76.712	ENSORLG00015006767	exosc2	99	76.712	Oryzias_latipes_hsok
ENSCPBG00000022626	EXOSC2	99	75.685	ENSOMEG00000003533	exosc2	99	75.685	Oryzias_melastigma
ENSCPBG00000022626	EXOSC2	99	86.986	ENSOGAG00000007558	EXOSC2	99	86.986	Otolemur_garnettii
ENSCPBG00000022626	EXOSC2	99	86.054	ENSOARG00000007438	EXOSC2	99	86.054	Ovis_aries
ENSCPBG00000022626	EXOSC2	99	86.986	ENSPPAG00000034796	EXOSC2	99	86.986	Pan_paniscus
ENSCPBG00000022626	EXOSC2	99	86.644	ENSPPRG00000001089	EXOSC2	99	86.644	Panthera_pardus
ENSCPBG00000022626	EXOSC2	99	86.644	ENSPTIG00000021163	EXOSC2	99	86.644	Panthera_tigris_altaica
ENSCPBG00000022626	EXOSC2	99	86.986	ENSPTRG00000021476	EXOSC2	99	86.986	Pan_troglodytes
ENSCPBG00000022626	EXOSC2	99	86.986	ENSPTRG00000045766	-	99	86.986	Pan_troglodytes
ENSCPBG00000022626	EXOSC2	99	86.301	ENSPANG00000025966	EXOSC2	99	86.301	Papio_anubis
ENSCPBG00000022626	EXOSC2	100	78.912	ENSPKIG00000004271	exosc2	100	78.912	Paramormyrops_kingsleyae
ENSCPBG00000022626	EXOSC2	100	96.939	ENSPSIG00000006743	EXOSC2	100	96.939	Pelodiscus_sinensis
ENSCPBG00000022626	EXOSC2	86	81.028	ENSPMGG00000010980	exosc2	99	81.028	Periophthalmus_magnuspinnatus
ENSCPBG00000022626	EXOSC2	99	87.329	ENSPEMG00000006345	Exosc2	99	87.329	Peromyscus_maniculatus_bairdii
ENSCPBG00000022626	EXOSC2	99	75.510	ENSPMAG00000001280	exosc2	99	75.510	Petromyzon_marinus
ENSCPBG00000022626	EXOSC2	99	87.671	ENSPCIG00000024122	EXOSC2	97	87.671	Phascolarctos_cinereus
ENSCPBG00000022626	EXOSC2	99	76.027	ENSPFOG00000019819	exosc2	99	76.027	Poecilia_formosa
ENSCPBG00000022626	EXOSC2	99	76.289	ENSPLAG00000004605	exosc2	99	76.289	Poecilia_latipinna
ENSCPBG00000022626	EXOSC2	99	76.289	ENSPMEG00000010976	exosc2	99	76.289	Poecilia_mexicana
ENSCPBG00000022626	EXOSC2	99	76.289	ENSPREG00000014306	exosc2	99	76.289	Poecilia_reticulata
ENSCPBG00000022626	EXOSC2	99	87.329	ENSPPYG00000019695	EXOSC2	99	87.329	Pongo_abelii
ENSCPBG00000022626	EXOSC2	99	87.329	ENSPCAG00000013400	EXOSC2	99	87.329	Procavia_capensis
ENSCPBG00000022626	EXOSC2	99	87.329	ENSPCOG00000017639	EXOSC2	99	87.329	Propithecus_coquereli
ENSCPBG00000022626	EXOSC2	99	86.644	ENSPVAG00000001513	EXOSC2	99	86.644	Pteropus_vampyrus
ENSCPBG00000022626	EXOSC2	99	77.397	ENSPNYG00000007383	exosc2	99	77.397	Pundamilia_nyererei
ENSCPBG00000022626	EXOSC2	99	80.887	ENSPNAG00000014281	exosc2	99	80.887	Pygocentrus_nattereri
ENSCPBG00000022626	EXOSC2	99	87.329	ENSRNOG00000009245	Exosc2	99	87.329	Rattus_norvegicus
ENSCPBG00000022626	EXOSC2	100	79.592	ENSRBIG00000029791	-	100	79.592	Rhinopithecus_bieti
ENSCPBG00000022626	EXOSC2	99	86.301	ENSRBIG00000031203	-	99	86.301	Rhinopithecus_bieti
ENSCPBG00000022626	EXOSC2	100	78.571	ENSRROG00000043609	-	100	78.571	Rhinopithecus_roxellana
ENSCPBG00000022626	EXOSC2	99	86.301	ENSRROG00000010827	-	99	86.301	Rhinopithecus_roxellana
ENSCPBG00000022626	EXOSC2	88	42.373	YHR069C	-	82	42.373	Saccharomyces_cerevisiae
ENSCPBG00000022626	EXOSC2	99	86.986	ENSSBOG00000022712	EXOSC2	99	86.986	Saimiri_boliviensis_boliviensis
ENSCPBG00000022626	EXOSC2	99	87.329	ENSSHAG00000016050	EXOSC2	99	87.329	Sarcophilus_harrisii
ENSCPBG00000022626	EXOSC2	99	79.110	ENSSFOG00015011245	exosc2	99	79.110	Scleropages_formosus
ENSCPBG00000022626	EXOSC2	99	76.712	ENSSMAG00000003112	exosc2	99	76.712	Scophthalmus_maximus
ENSCPBG00000022626	EXOSC2	99	75.593	ENSSDUG00000004634	exosc2	99	75.593	Seriola_dumerili
ENSCPBG00000022626	EXOSC2	99	76.370	ENSSLDG00000010616	exosc2	99	76.370	Seriola_lalandi_dorsalis
ENSCPBG00000022626	EXOSC2	100	90.572	ENSSPUG00000013391	EXOSC2	100	90.572	Sphenodon_punctatus
ENSCPBG00000022626	EXOSC2	99	76.712	ENSSPAG00000022947	exosc2	99	76.712	Stegastes_partitus
ENSCPBG00000022626	EXOSC2	99	88.014	ENSSSCG00000005704	EXOSC2	99	88.014	Sus_scrofa
ENSCPBG00000022626	EXOSC2	100	82.993	ENSTGUG00000004697	EXOSC2	100	82.993	Taeniopygia_guttata
ENSCPBG00000022626	EXOSC2	99	71.575	ENSTRUG00000022436	exosc2	99	71.575	Takifugu_rubripes
ENSCPBG00000022626	EXOSC2	99	80.137	ENSTTRG00000015159	EXOSC2	99	80.137	Tursiops_truncatus
ENSCPBG00000022626	EXOSC2	94	85.145	ENSUAMG00000009651	EXOSC2	98	85.145	Ursus_americanus
ENSCPBG00000022626	EXOSC2	99	86.986	ENSUMAG00000018726	EXOSC2	99	86.986	Ursus_maritimus
ENSCPBG00000022626	EXOSC2	99	85.616	ENSVVUG00000027665	EXOSC2	99	85.616	Vulpes_vulpes
ENSCPBG00000022626	EXOSC2	99	79.452	ENSXETG00000001340	exosc2	99	79.452	Xenopus_tropicalis
ENSCPBG00000022626	EXOSC2	99	76.289	ENSXMAG00000005265	exosc2	99	76.289	Xiphophorus_maculatus