EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000022628 (Gene tree)
Gene ID: 101935913
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 15946 bases
Position: chrKK082938.1:4463580-4479525
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032269	zf-C2H2	PF00096.26	2.7e-12	1	2
ENSCPBP00000032269	zf-C2H2	PF00096.26	2.7e-12	2	2
ENSCPBP00000032269	zf-met	PF12874.7	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037958	PRDM12-201	2660	XM_005293333	ENSCPBP00000032269	354 (aa)	XP_005293390	UPI000388A031

Gene Model

Click here to download ENSCPBG00000022628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022628	PRDM12	94	92.515	ENSG00000130711	PRDM12	100	88.011	Homo_sapiens
ENSCPBG00000022628	PRDM12	99	76.302	ENSAPOG00000016051	prdm12b	100	76.562	Acanthochromis_polyacanthus
ENSCPBG00000022628	PRDM12	99	66.757	ENSAPOG00000018234	-	100	67.120	Acanthochromis_polyacanthus
ENSCPBG00000022628	PRDM12	91	91.022	ENSAMEG00000016234	PRDM12	99	91.022	Ailuropoda_melanoleuca
ENSCPBG00000022628	PRDM12	99	78.364	ENSACIG00000005193	-	100	78.364	Amphilophus_citrinellus
ENSCPBG00000022628	PRDM12	99	77.926	ENSACIG00000019578	prdm12b	100	77.926	Amphilophus_citrinellus
ENSCPBG00000022628	PRDM12	99	77.632	ENSAOCG00000015040	prdm12b	100	77.632	Amphiprion_ocellaris
ENSCPBG00000022628	PRDM12	100	72.585	ENSAPEG00000022849	-	100	73.890	Amphiprion_percula
ENSCPBG00000022628	PRDM12	99	78.249	ENSAPEG00000015092	prdm12b	100	78.249	Amphiprion_percula
ENSCPBG00000022628	PRDM12	95	81.525	ENSATEG00000014595	-	99	81.525	Anabas_testudineus
ENSCPBG00000022628	PRDM12	96	92.647	ENSANAG00000020616	PRDM12	100	92.647	Aotus_nancymaae
ENSCPBG00000022628	PRDM12	99	79.834	ENSACLG00000011876	prdm12b	100	79.834	Astatotilapia_calliptera
ENSCPBG00000022628	PRDM12	99	75.381	ENSACLG00000007631	-	100	76.142	Astatotilapia_calliptera
ENSCPBG00000022628	PRDM12	99	83.243	ENSAMXG00000033665	prdm12b	100	85.135	Astyanax_mexicanus
ENSCPBG00000022628	PRDM12	99	80.833	ENSAMXG00000008540	PRDM12	100	80.833	Astyanax_mexicanus
ENSCPBG00000022628	PRDM12	94	93.114	ENSBTAG00000023797	PRDM12	100	90.028	Bos_taurus
ENSCPBG00000022628	PRDM12	94	92.814	ENSCJAG00000020540	PRDM12	100	90.000	Callithrix_jacchus
ENSCPBG00000022628	PRDM12	82	92.784	ENSCAFG00000023076	PRDM12	99	88.474	Canis_familiaris
ENSCPBG00000022628	PRDM12	94	93.413	ENSCAFG00020024046	PRDM12	100	89.560	Canis_lupus_dingo
ENSCPBG00000022628	PRDM12	94	93.413	ENSCHIG00000025005	PRDM12	100	90.055	Capra_hircus
ENSCPBG00000022628	PRDM12	88	92.971	ENSCPOG00000005901	PRDM12	95	92.971	Cavia_porcellus
ENSCPBG00000022628	PRDM12	94	92.814	ENSCCAG00000037485	PRDM12	100	89.256	Cebus_capucinus
ENSCPBG00000022628	PRDM12	94	92.814	ENSCATG00000020327	PRDM12	100	89.256	Cercocebus_atys
ENSCPBG00000022628	PRDM12	94	92.814	ENSCLAG00000005499	PRDM12	92	92.814	Chinchilla_lanigera
ENSCPBG00000022628	PRDM12	94	92.814	ENSCSAG00000014756	PRDM12	100	89.011	Chlorocebus_sabaeus
ENSCPBG00000022628	PRDM12	94	92.814	ENSCGRG00001015005	Prdm12	100	88.525	Cricetulus_griseus_chok1gshd
ENSCPBG00000022628	PRDM12	99	74.103	ENSCVAG00000000944	-	100	75.128	Cyprinodon_variegatus
ENSCPBG00000022628	PRDM12	99	78.976	ENSCVAG00000017166	prdm12b	100	79.357	Cyprinodon_variegatus
ENSCPBG00000022628	PRDM12	99	85.792	ENSDARG00000007430	prdm12b	100	85.792	Danio_rerio
ENSCPBG00000022628	PRDM12	94	92.515	ENSDNOG00000042302	PRDM12	99	89.474	Dasypus_novemcinctus
ENSCPBG00000022628	PRDM12	91	62.571	ENSEBUG00000016780	prdm12b	78	64.000	Eptatretus_burgeri
ENSCPBG00000022628	PRDM12	96	93.235	ENSEASG00005008472	PRDM12	100	90.055	Equus_asinus_asinus
ENSCPBG00000022628	PRDM12	96	92.941	ENSECAG00000005933	PRDM12	100	89.779	Equus_caballus
ENSCPBG00000022628	PRDM12	99	83.288	ENSELUG00000009905	prdm12b	100	83.288	Esox_lucius
ENSCPBG00000022628	PRDM12	99	79.444	ENSELUG00000013674	PRDM12	99	79.444	Esox_lucius
ENSCPBG00000022628	PRDM12	94	93.413	ENSFCAG00000043086	PRDM12	100	89.807	Felis_catus
ENSCPBG00000022628	PRDM12	100	96.893	ENSFALG00000001445	PRDM12	89	96.893	Ficedula_albicollis
ENSCPBG00000022628	PRDM12	99	77.003	ENSFHEG00000007746	-	100	76.227	Fundulus_heteroclitus
ENSCPBG00000022628	PRDM12	99	78.610	ENSFHEG00000003944	prdm12b	100	78.989	Fundulus_heteroclitus
ENSCPBG00000022628	PRDM12	99	81.356	ENSGMOG00000011797	prdm12b	99	81.356	Gadus_morhua
ENSCPBG00000022628	PRDM12	100	96.893	ENSGALG00000003895	PRDM12	100	96.893	Gallus_gallus
ENSCPBG00000022628	PRDM12	100	78.042	ENSGAFG00000010827	prdm12b	100	79.365	Gambusia_affinis
ENSCPBG00000022628	PRDM12	100	79.301	ENSGACG00000016713	prdm12b	100	79.301	Gasterosteus_aculeatus
ENSCPBG00000022628	PRDM12	100	99.718	ENSGAGG00000014083	PRDM12	100	99.718	Gopherus_agassizii
ENSCPBG00000022628	PRDM12	94	92.216	ENSGGOG00000010568	PRDM12	100	87.978	Gorilla_gorilla
ENSCPBG00000022628	PRDM12	99	78.342	ENSHBUG00000022878	prdm12b	100	78.342	Haplochromis_burtoni
ENSCPBG00000022628	PRDM12	99	75.381	ENSHBUG00000022537	-	93	76.142	Haplochromis_burtoni
ENSCPBG00000022628	PRDM12	94	91.916	ENSHGLG00000013939	PRDM12	100	87.671	Heterocephalus_glaber_female
ENSCPBG00000022628	PRDM12	99	74.862	ENSHCOG00000021167	-	100	74.862	Hippocampus_comes
ENSCPBG00000022628	PRDM12	92	79.825	ENSHCOG00000003663	prdm12b	100	73.469	Hippocampus_comes
ENSCPBG00000022628	PRDM12	99	77.198	ENSIPUG00000019544	PRDM12	100	77.198	Ictalurus_punctatus
ENSCPBG00000022628	PRDM12	99	84.239	ENSIPUG00000017053	prdm12b	100	84.511	Ictalurus_punctatus
ENSCPBG00000022628	PRDM12	95	93.195	ENSSTOG00000005986	PRDM12	88	93.195	Ictidomys_tridecemlineatus
ENSCPBG00000022628	PRDM12	93	93.333	ENSJJAG00000005424	Prdm12	100	93.333	Jaculus_jaculus
ENSCPBG00000022628	PRDM12	99	73.020	ENSKMAG00000016921	prdm12b	100	73.515	Kryptolebias_marmoratus
ENSCPBG00000022628	PRDM12	99	80.112	ENSKMAG00000021205	-	93	83.136	Kryptolebias_marmoratus
ENSCPBG00000022628	PRDM12	99	77.105	ENSLBEG00000007776	-	100	78.421	Labrus_bergylta
ENSCPBG00000022628	PRDM12	99	77.513	ENSLBEG00000017769	prdm12b	100	78.042	Labrus_bergylta
ENSCPBG00000022628	PRDM12	99	92.918	ENSLACG00000017560	PRDM12	99	92.918	Latimeria_chalumnae
ENSCPBG00000022628	PRDM12	99	86.777	ENSLOCG00000005429	prdm12b	99	87.328	Lepisosteus_oculatus
ENSCPBG00000022628	PRDM12	94	91.765	ENSLAFG00000006979	PRDM12	93	91.643	Loxodonta_africana
ENSCPBG00000022628	PRDM12	100	86.376	ENSMFAG00000040322	PRDM12	100	88.556	Macaca_fascicularis
ENSCPBG00000022628	PRDM12	94	92.814	ENSMNEG00000037234	PRDM12	100	89.256	Macaca_nemestrina
ENSCPBG00000022628	PRDM12	99	78.933	ENSMAMG00000013212	prdm12b	100	79.467	Mastacembelus_armatus
ENSCPBG00000022628	PRDM12	99	76.804	ENSMAMG00000018988	-	100	76.546	Mastacembelus_armatus
ENSCPBG00000022628	PRDM12	99	75.000	ENSMZEG00005000415	PRDM12	100	75.758	Maylandia_zebra
ENSCPBG00000022628	PRDM12	98	96.839	ENSMGAG00000005438	PRDM12	98	96.839	Meleagris_gallopavo
ENSCPBG00000022628	PRDM12	100	88.767	ENSMAUG00000013040	Prdm12	100	88.767	Mesocricetus_auratus
ENSCPBG00000022628	PRDM12	96	92.962	ENSMICG00000015480	PRDM12	100	89.779	Microcebus_murinus
ENSCPBG00000022628	PRDM12	99	91.168	ENSMOCG00000021026	Prdm12	93	92.962	Microtus_ochrogaster
ENSCPBG00000022628	PRDM12	100	96.056	ENSMODG00000012108	PRDM12	100	96.056	Monodelphis_domestica
ENSCPBG00000022628	PRDM12	99	68.194	ENSMALG00000021901	prdm12b	99	68.194	Monopterus_albus
ENSCPBG00000022628	PRDM12	94	92.515	MGP_CAROLIEiJ_G0023414	Prdm12	100	88.493	Mus_caroli
ENSCPBG00000022628	PRDM12	94	92.515	ENSMUSG00000079466	Prdm12	100	88.493	Mus_musculus
ENSCPBG00000022628	PRDM12	94	92.515	MGP_PahariEiJ_G0024871	Prdm12	100	88.493	Mus_pahari
ENSCPBG00000022628	PRDM12	94	92.515	MGP_SPRETEiJ_G0024331	Prdm12	100	88.493	Mus_spretus
ENSCPBG00000022628	PRDM12	92	93.272	ENSNGAG00000018480	Prdm12	100	88.827	Nannospalax_galili
ENSCPBG00000022628	PRDM12	99	75.549	ENSNBRG00000024312	-	100	75.824	Neolamprologus_brichardi
ENSCPBG00000022628	PRDM12	99	77.719	ENSNBRG00000006727	prdm12b	100	77.719	Neolamprologus_brichardi
ENSCPBG00000022628	PRDM12	100	85.352	ENSMEUG00000003828	PRDM12	100	85.352	Notamacropus_eugenii
ENSCPBG00000022628	PRDM12	93	92.424	ENSOPRG00000008680	PRDM12	100	92.424	Ochotona_princeps
ENSCPBG00000022628	PRDM12	96	92.669	ENSODEG00000016282	PRDM12	64	92.669	Octodon_degus
ENSCPBG00000022628	PRDM12	61	95.392	ENSOANG00000001043	PRDM12	100	95.392	Ornithorhynchus_anatinus
ENSCPBG00000022628	PRDM12	88	88.498	ENSOCUG00000008241	PRDM12	100	88.498	Oryctolagus_cuniculus
ENSCPBG00000022628	PRDM12	100	77.045	ENSORLG00000007114	prdm12b	100	77.309	Oryzias_latipes
ENSCPBG00000022628	PRDM12	99	73.590	ENSORLG00000017558	-	100	75.385	Oryzias_latipes
ENSCPBG00000022628	PRDM12	100	75.591	ENSORLG00020019565	prdm12b	100	76.640	Oryzias_latipes_hni
ENSCPBG00000022628	PRDM12	99	73.402	ENSORLG00020013167	-	100	75.192	Oryzias_latipes_hni
ENSCPBG00000022628	PRDM12	99	73.590	ENSORLG00015003435	-	100	75.385	Oryzias_latipes_hsok
ENSCPBG00000022628	PRDM12	100	75.989	ENSORLG00015007621	prdm12b	100	77.045	Oryzias_latipes_hsok
ENSCPBG00000022628	PRDM12	100	75.718	ENSOMEG00000004134	prdm12b	100	76.501	Oryzias_melastigma
ENSCPBG00000022628	PRDM12	99	77.188	ENSOMEG00000007762	-	100	77.454	Oryzias_melastigma
ENSCPBG00000022628	PRDM12	94	93.393	ENSOGAG00000007557	PRDM12	100	93.393	Otolemur_garnettii
ENSCPBG00000022628	PRDM12	83	90.444	ENSPPAG00000031506	-	99	90.444	Pan_paniscus
ENSCPBG00000022628	PRDM12	100	82.451	ENSPPRG00000023024	PRDM12	92	82.451	Panthera_pardus
ENSCPBG00000022628	PRDM12	94	92.515	ENSPTRG00000043324	-	100	88.251	Pan_troglodytes
ENSCPBG00000022628	PRDM12	94	92.515	ENSPTRG00000021475	PRDM12	100	88.251	Pan_troglodytes
ENSCPBG00000022628	PRDM12	94	92.814	ENSPANG00000025967	PRDM12	100	89.256	Papio_anubis
ENSCPBG00000022628	PRDM12	99	84.677	ENSPKIG00000007228	prdm12b	100	84.946	Paramormyrops_kingsleyae
ENSCPBG00000022628	PRDM12	97	77.684	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSCPBG00000022628	PRDM12	100	97.740	ENSPSIG00000006739	PRDM12	100	97.740	Pelodiscus_sinensis
ENSCPBG00000022628	PRDM12	100	79.348	ENSPMGG00000008867	prdm12b	100	79.891	Periophthalmus_magnuspinnatus
ENSCPBG00000022628	PRDM12	99	75.196	ENSPMGG00000002356	-	100	75.196	Periophthalmus_magnuspinnatus
ENSCPBG00000022628	PRDM12	94	92.771	ENSPEMG00000009969	Prdm12	96	89.205	Peromyscus_maniculatus_bairdii
ENSCPBG00000022628	PRDM12	100	96.056	ENSPCIG00000024119	PRDM12	100	96.056	Phascolarctos_cinereus
ENSCPBG00000022628	PRDM12	99	80.323	ENSPFOG00000019841	prdm12b	100	80.323	Poecilia_formosa
ENSCPBG00000022628	PRDM12	100	77.428	ENSPLAG00000016626	prdm12b	100	78.740	Poecilia_latipinna
ENSCPBG00000022628	PRDM12	97	77.358	ENSPMEG00000016698	prdm12b	100	78.167	Poecilia_mexicana
ENSCPBG00000022628	PRDM12	94	77.326	ENSPREG00000003211	-	94	77.326	Poecilia_reticulata
ENSCPBG00000022628	PRDM12	100	77.225	ENSPREG00000015073	prdm12b	100	78.796	Poecilia_reticulata
ENSCPBG00000022628	PRDM12	97	91.279	ENSPPYG00000019694	PRDM12	98	91.279	Pongo_abelii
ENSCPBG00000022628	PRDM12	94	93.413	ENSPCOG00000022255	PRDM12	100	89.344	Propithecus_coquereli
ENSCPBG00000022628	PRDM12	94	93.713	ENSPVAG00000001511	PRDM12	100	89.344	Pteropus_vampyrus
ENSCPBG00000022628	PRDM12	99	77.660	ENSPNYG00000009607	prdm12b	100	77.660	Pundamilia_nyererei
ENSCPBG00000022628	PRDM12	99	75.000	ENSPNYG00000013589	-	100	75.758	Pundamilia_nyererei
ENSCPBG00000022628	PRDM12	99	84.783	ENSPNAG00000024532	prdm12b	100	86.141	Pygocentrus_nattereri
ENSCPBG00000022628	PRDM12	99	74.933	ENSPNAG00000013396	PRDM12	100	76.011	Pygocentrus_nattereri
ENSCPBG00000022628	PRDM12	94	92.515	ENSRNOG00000009218	Prdm12	100	88.493	Rattus_norvegicus
ENSCPBG00000022628	PRDM12	90	93.375	ENSRBIG00000042712	PRDM12	98	85.994	Rhinopithecus_bieti
ENSCPBG00000022628	PRDM12	91	93.458	ENSRROG00000043554	PRDM12	100	93.458	Rhinopithecus_roxellana
ENSCPBG00000022628	PRDM12	100	95.225	ENSSHAG00000015972	PRDM12	100	95.225	Sarcophilus_harrisii
ENSCPBG00000022628	PRDM12	99	75.064	ENSSMAG00000003754	prdm12b	100	75.835	Scophthalmus_maximus
ENSCPBG00000022628	PRDM12	99	78.125	ENSSDUG00000023498	prdm12b	100	78.125	Seriola_dumerili
ENSCPBG00000022628	PRDM12	96	81.341	ENSSDUG00000019071	-	100	78.329	Seriola_dumerili
ENSCPBG00000022628	PRDM12	99	78.215	ENSSLDG00000009557	prdm12b	100	78.215	Seriola_lalandi_dorsalis
ENSCPBG00000022628	PRDM12	99	82.303	ENSSLDG00000013562	-	100	82.303	Seriola_lalandi_dorsalis
ENSCPBG00000022628	PRDM12	100	97.175	ENSSPUG00000013424	PRDM12	100	97.175	Sphenodon_punctatus
ENSCPBG00000022628	PRDM12	99	68.912	ENSSPAG00000022420	-	100	69.948	Stegastes_partitus
ENSCPBG00000022628	PRDM12	99	77.690	ENSSPAG00000018824	prdm12b	100	78.740	Stegastes_partitus
ENSCPBG00000022628	PRDM12	94	93.413	ENSSSCG00000005703	PRDM12	100	89.560	Sus_scrofa
ENSCPBG00000022628	PRDM12	99	79.189	ENSTRUG00000018659	prdm12b	100	79.459	Takifugu_rubripes
ENSCPBG00000022628	PRDM12	99	78.947	ENSTRUG00000013239	-	100	78.947	Takifugu_rubripes
ENSCPBG00000022628	PRDM12	99	78.378	ENSTNIG00000009020	prdm12b	99	79.189	Tetraodon_nigroviridis
ENSCPBG00000022628	PRDM12	99	77.095	ENSTNIG00000005859	-	99	77.095	Tetraodon_nigroviridis
ENSCPBG00000022628	PRDM12	94	93.413	ENSUAMG00000009653	PRDM12	94	92.669	Ursus_americanus
ENSCPBG00000022628	PRDM12	94	93.373	ENSVVUG00000027662	PRDM12	79	93.373	Vulpes_vulpes
ENSCPBG00000022628	PRDM12	100	78.457	ENSXCOG00000002836	prdm12b	100	79.521	Xiphophorus_couchianus
ENSCPBG00000022628	PRDM12	99	75.781	ENSXMAG00000028012	-	100	76.302	Xiphophorus_maculatus
ENSCPBG00000022628	PRDM12	99	78.133	ENSXMAG00000005537	prdm12b	100	79.200	Xiphophorus_maculatus