EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000022647 (Gene tree)
Gene ID: 101950725
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4582 bases
Position: chrKK083113.1:1430694-1435275
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032308	Nop16	PF09420.10	3.7e-22	1	2
ENSCPBP00000032308	Nop16	PF09420.10	3.7e-22	2	2
ENSCPBP00000032307	Nop16	PF09420.10	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000037998	-	1300	-	ENSCPBP00000032308	180 (aa)	XP_005282334	UPI000388B594
ENSCPBT00000037996	-	1746	-	ENSCPBP00000032307	171 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000022647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022647	-	96	54.651	ENSAPOG00000010682	-	96	54.651	Acanthochromis_polyacanthus
ENSCPBG00000022647	-	99	75.281	ENSAMEG00000006988	-	99	75.281	Ailuropoda_melanoleuca
ENSCPBG00000022647	-	96	56.395	ENSACIG00000019263	nop16	95	56.395	Amphilophus_citrinellus
ENSCPBG00000022647	-	96	55.491	ENSAOCG00000005504	nop16	96	55.491	Amphiprion_ocellaris
ENSCPBG00000022647	-	96	55.491	ENSAPEG00000006605	nop16	96	55.491	Amphiprion_percula
ENSCPBG00000022647	-	96	55.233	ENSATEG00000014089	nop16	95	55.233	Anabas_testudineus
ENSCPBG00000022647	-	100	74.444	ENSACAG00000006333	-	100	74.444	Anolis_carolinensis
ENSCPBG00000022647	-	99	71.910	ENSANAG00000015743	-	99	71.910	Aotus_nancymaae
ENSCPBG00000022647	-	99	65.169	ENSANAG00000027410	-	99	65.169	Aotus_nancymaae
ENSCPBG00000022647	-	96	56.977	ENSACLG00000025227	nop16	95	56.977	Astatotilapia_calliptera
ENSCPBG00000022647	-	92	47.024	ENSAMXG00000006843	nop16	93	47.024	Astyanax_mexicanus
ENSCPBG00000022647	-	99	75.843	ENSBTAG00000010734	NOP16	99	75.843	Bos_taurus
ENSCPBG00000022647	-	99	74.719	ENSCAFG00000016694	NOP16	99	74.719	Canis_familiaris
ENSCPBG00000022647	-	99	74.719	ENSCAFG00020011505	-	94	74.719	Canis_lupus_dingo
ENSCPBG00000022647	-	99	75.843	ENSCHIG00000022082	-	99	75.843	Capra_hircus
ENSCPBG00000022647	-	99	74.719	ENSTSYG00000030409	-	99	74.719	Carlito_syrichta
ENSCPBG00000022647	-	99	60.674	ENSTSYG00000032690	-	99	60.674	Carlito_syrichta
ENSCPBG00000022647	-	99	73.596	ENSCPOG00000026072	-	99	73.596	Cavia_porcellus
ENSCPBG00000022647	-	98	64.972	ENSCCAG00000026775	-	99	64.972	Cebus_capucinus
ENSCPBG00000022647	-	99	71.348	ENSCLAG00000015405	-	99	71.348	Chinchilla_lanigera
ENSCPBG00000022647	-	99	74.157	ENSCSAG00000009400	-	99	74.157	Chlorocebus_sabaeus
ENSCPBG00000022647	-	88	43.210	ENSCING00000006179	-	87	43.210	Ciona_intestinalis
ENSCPBG00000022647	-	88	41.615	ENSCSAVG00000000269	-	87	41.250	Ciona_savignyi
ENSCPBG00000022647	-	99	74.157	ENSCGRG00001004259	Nop16	99	74.157	Cricetulus_griseus_chok1gshd
ENSCPBG00000022647	-	99	74.157	ENSCGRG00000010975	Nop16	99	74.157	Cricetulus_griseus_crigri
ENSCPBG00000022647	-	96	50.000	ENSCSEG00000020523	nop16	97	50.000	Cynoglossus_semilaevis
ENSCPBG00000022647	-	99	53.297	ENSCVAG00000020140	nop16	100	53.297	Cyprinodon_variegatus
ENSCPBG00000022647	-	98	49.718	ENSDARG00000044402	nop16	99	49.718	Danio_rerio
ENSCPBG00000022647	-	99	73.596	ENSDNOG00000042890	-	99	73.596	Dasypus_novemcinctus
ENSCPBG00000022647	-	99	75.281	ENSDORG00000008872	Nop16	99	75.281	Dipodomys_ordii
ENSCPBG00000022647	-	93	30.159	FBgn0039868	CG11563	87	30.159	Drosophila_melanogaster
ENSCPBG00000022647	-	93	43.503	ENSEBUG00000011196	nop16	95	43.503	Eptatretus_burgeri
ENSCPBG00000022647	-	99	74.719	ENSEASG00005011988	-	99	74.719	Equus_asinus_asinus
ENSCPBG00000022647	-	99	75.281	ENSECAG00000021354	NOP16	99	75.281	Equus_caballus
ENSCPBG00000022647	-	96	55.491	ENSELUG00000000401	nop16	96	55.491	Esox_lucius
ENSCPBG00000022647	-	99	74.157	ENSFCAG00000025473	-	99	74.157	Felis_catus
ENSCPBG00000022647	-	100	68.333	ENSFALG00000008553	-	100	68.333	Ficedula_albicollis
ENSCPBG00000022647	-	99	71.348	ENSFDAG00000000193	-	99	71.348	Fukomys_damarensis
ENSCPBG00000022647	-	96	55.172	ENSFHEG00000016452	nop16	95	55.172	Fundulus_heteroclitus
ENSCPBG00000022647	-	100	77.222	ENSGALG00000003355	-	100	77.222	Gallus_gallus
ENSCPBG00000022647	-	87	52.229	ENSGAFG00000011616	nop16	84	52.229	Gambusia_affinis
ENSCPBG00000022647	-	92	49.091	ENSGACG00000020810	nop16	98	49.091	Gasterosteus_aculeatus
ENSCPBG00000022647	-	95	49.714	ENSGACG00000020819	-	99	49.714	Gasterosteus_aculeatus
ENSCPBG00000022647	-	96	53.409	ENSGACG00000002618	-	98	53.409	Gasterosteus_aculeatus
ENSCPBG00000022647	-	96	50.279	ENSGACG00000003122	-	97	54.545	Gasterosteus_aculeatus
ENSCPBG00000022647	-	50	80.233	ENSGAGG00000013246	-	99	80.233	Gopherus_agassizii
ENSCPBG00000022647	-	96	56.395	ENSHBUG00000013527	nop16	95	56.395	Haplochromis_burtoni
ENSCPBG00000022647	-	99	73.596	ENSHGLG00000013437	NOP16	99	73.596	Heterocephalus_glaber_female
ENSCPBG00000022647	-	99	73.596	ENSHGLG00100011375	NOP16	99	73.596	Heterocephalus_glaber_male
ENSCPBG00000022647	-	96	52.326	ENSHCOG00000019999	nop16	97	52.326	Hippocampus_comes
ENSCPBG00000022647	-	94	49.412	ENSIPUG00000006682	nop16	95	49.412	Ictalurus_punctatus
ENSCPBG00000022647	-	99	73.034	ENSSTOG00000004869	-	99	73.034	Ictidomys_tridecemlineatus
ENSCPBG00000022647	-	99	76.404	ENSJJAG00000017655	Nop16	99	76.404	Jaculus_jaculus
ENSCPBG00000022647	-	96	53.488	ENSKMAG00000006164	nop16	95	53.488	Kryptolebias_marmoratus
ENSCPBG00000022647	-	100	53.889	ENSLBEG00000018355	nop16	78	55.233	Labrus_bergylta
ENSCPBG00000022647	-	99	65.730	ENSLACG00000014884	nop16	99	65.730	Latimeria_chalumnae
ENSCPBG00000022647	-	96	58.721	ENSLOCG00000012348	nop16	94	58.721	Lepisosteus_oculatus
ENSCPBG00000022647	-	99	73.596	ENSLAFG00000017886	-	99	73.596	Loxodonta_africana
ENSCPBG00000022647	-	96	58.721	ENSMAMG00000021868	nop16	95	58.721	Mastacembelus_armatus
ENSCPBG00000022647	-	96	56.977	ENSMZEG00005012112	nop16	95	56.977	Maylandia_zebra
ENSCPBG00000022647	-	57	77.451	ENSMGAG00000004726	-	100	77.451	Meleagris_gallopavo
ENSCPBG00000022647	-	93	67.857	ENSMAUG00000015569	-	98	67.857	Mesocricetus_auratus
ENSCPBG00000022647	-	56	71.287	ENSMAUG00000009852	-	95	71.287	Mesocricetus_auratus
ENSCPBG00000022647	-	99	74.157	ENSMOCG00000020788	Nop16	99	74.157	Microtus_ochrogaster
ENSCPBG00000022647	-	97	56.322	ENSMMOG00000016054	nop16	100	56.322	Mola_mola
ENSCPBG00000022647	-	99	74.719	ENSMODG00000005214	-	99	74.719	Monodelphis_domestica
ENSCPBG00000022647	-	96	54.598	ENSMALG00000021263	nop16	95	54.598	Monopterus_albus
ENSCPBG00000022647	-	99	73.596	MGP_CAROLIEiJ_G0018538	Nop16	99	73.596	Mus_caroli
ENSCPBG00000022647	-	99	74.157	ENSMUSG00000025869	Nop16	99	74.157	Mus_musculus
ENSCPBG00000022647	-	99	74.719	MGP_PahariEiJ_G0019603	Nop16	99	74.719	Mus_pahari
ENSCPBG00000022647	-	99	74.157	MGP_SPRETEiJ_G0019418	Nop16	99	74.157	Mus_spretus
ENSCPBG00000022647	-	99	74.719	ENSMPUG00000012552	-	99	74.719	Mustela_putorius_furo
ENSCPBG00000022647	-	99	73.034	ENSMPUG00000016964	-	99	73.034	Mustela_putorius_furo
ENSCPBG00000022647	-	99	73.596	ENSMLUG00000003504	-	99	73.596	Myotis_lucifugus
ENSCPBG00000022647	-	99	75.281	ENSNGAG00000018045	Nop16	99	75.281	Nannospalax_galili
ENSCPBG00000022647	-	96	55.233	ENSNBRG00000015181	nop16	96	55.233	Neolamprologus_brichardi
ENSCPBG00000022647	-	99	73.596	ENSODEG00000009586	-	99	73.596	Octodon_degus
ENSCPBG00000022647	-	96	56.977	ENSONIG00000016417	nop16	95	56.977	Oreochromis_niloticus
ENSCPBG00000022647	-	99	74.719	ENSOCUG00000013171	-	99	74.719	Oryctolagus_cuniculus
ENSCPBG00000022647	-	96	57.803	ENSORLG00000026611	nop16	95	57.803	Oryzias_latipes
ENSCPBG00000022647	-	96	55.814	ENSOMEG00000023001	nop16	95	55.814	Oryzias_melastigma
ENSCPBG00000022647	-	99	75.281	ENSOGAG00000000824	-	99	75.281	Otolemur_garnettii
ENSCPBG00000022647	-	99	75.843	ENSOARG00000002165	-	99	75.843	Ovis_aries
ENSCPBG00000022647	-	99	74.719	ENSPPAG00000035473	-	99	74.719	Pan_paniscus
ENSCPBG00000022647	-	99	74.157	ENSPPRG00000016600	-	99	74.157	Panthera_pardus
ENSCPBG00000022647	-	99	74.157	ENSPTIG00000011708	-	99	74.157	Panthera_tigris_altaica
ENSCPBG00000022647	-	99	74.719	ENSPTRG00000017560	NOP16	99	74.719	Pan_troglodytes
ENSCPBG00000022647	-	99	52.247	ENSPKIG00000009587	nop16	99	52.247	Paramormyrops_kingsleyae
ENSCPBG00000022647	-	80	81.250	ENSPSIG00000013546	-	100	81.250	Pelodiscus_sinensis
ENSCPBG00000022647	-	95	54.386	ENSPMGG00000003443	nop16	99	54.386	Periophthalmus_magnuspinnatus
ENSCPBG00000022647	-	99	74.719	ENSPEMG00000020268	Nop16	99	74.719	Peromyscus_maniculatus_bairdii
ENSCPBG00000022647	-	96	75.145	ENSPCIG00000009782	-	97	75.145	Phascolarctos_cinereus
ENSCPBG00000022647	-	96	53.714	ENSPFOG00000010549	nop16	95	53.714	Poecilia_formosa
ENSCPBG00000022647	-	81	53.741	ENSPLAG00000007124	nop16	74	53.741	Poecilia_latipinna
ENSCPBG00000022647	-	96	54.335	ENSPMEG00000008611	nop16	95	54.335	Poecilia_mexicana
ENSCPBG00000022647	-	99	53.552	ENSPREG00000012940	nop16	95	54.286	Poecilia_reticulata
ENSCPBG00000022647	-	99	74.719	ENSPPYG00000016070	-	99	74.719	Pongo_abelii
ENSCPBG00000022647	-	96	56.977	ENSPNYG00000013529	nop16	95	56.977	Pundamilia_nyererei
ENSCPBG00000022647	-	92	49.697	ENSPNAG00000016233	nop16	93	49.697	Pygocentrus_nattereri
ENSCPBG00000022647	-	99	75.281	ENSRNOG00000017284	Nop16	99	75.281	Rattus_norvegicus
ENSCPBG00000022647	-	99	72.626	ENSSHAG00000001724	-	99	72.626	Sarcophilus_harrisii
ENSCPBG00000022647	-	92	52.727	ENSSFOG00015010537	nop16	79	51.977	Scleropages_formosus
ENSCPBG00000022647	-	96	53.977	ENSSDUG00000022349	nop16	95	53.977	Seriola_dumerili
ENSCPBG00000022647	-	96	54.913	ENSSLDG00000025171	nop16	95	54.913	Seriola_lalandi_dorsalis
ENSCPBG00000022647	-	80	62.500	ENSSARG00000006699	-	63	62.500	Sorex_araneus
ENSCPBG00000022647	-	99	76.404	ENSSPUG00000006508	-	98	76.404	Sphenodon_punctatus
ENSCPBG00000022647	-	96	54.651	ENSSPAG00000011772	nop16	95	54.651	Stegastes_partitus
ENSCPBG00000022647	-	99	73.034	ENSSSCG00000029577	-	99	73.034	Sus_scrofa
ENSCPBG00000022647	-	100	72.222	ENSTGUG00000000543	-	100	72.222	Taeniopygia_guttata
ENSCPBG00000022647	-	96	54.070	ENSTRUG00000020255	nop16	95	54.070	Takifugu_rubripes
ENSCPBG00000022647	-	96	54.651	ENSTNIG00000007616	nop16	95	54.651	Tetraodon_nigroviridis
ENSCPBG00000022647	-	99	75.281	ENSUAMG00000005139	-	99	75.281	Ursus_americanus
ENSCPBG00000022647	-	99	74.719	ENSVVUG00000001697	-	94	74.719	Vulpes_vulpes
ENSCPBG00000022647	-	92	53.939	ENSXETG00000022342	nop16	95	53.939	Xenopus_tropicalis
ENSCPBG00000022647	-	96	55.491	ENSXCOG00000018829	nop16	97	55.491	Xiphophorus_couchianus
ENSCPBG00000022647	-	96	56.069	ENSXMAG00000029113	nop16	95	56.069	Xiphophorus_maculatus