EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000022932 (Gene tree)
Gene ID: 101931505
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 72673 bases
Position: chrKK088194.1:1636191-1708863
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032708	Ago_hook	PF10427.9	4.1e-16	1	1
ENSCPBP00000032715	Ago_hook	PF10427.9	4.1e-16	1	1
ENSCPBP00000032711	Ago_hook	PF10427.9	4.8e-16	1	1
ENSCPBP00000032718	Ago_hook	PF10427.9	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000038471	TNRC6B-201	7547	-	ENSCPBP00000032708	1726 (aa)	-	-
ENSCPBT00000038479	TNRC6B-203	7376	-	ENSCPBP00000032715	1669 (aa)	-	-
ENSCPBT00000038482	TNRC6B-204	7217	-	ENSCPBP00000032718	1616 (aa)	-	-
ENSCPBT00000038474	TNRC6B-202	7520	-	ENSCPBP00000032711	1717 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000022932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000022932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000022932	TNRC6B	91	35.938	ENSCPBG00000027960	TNRC6C	92	35.966
ENSCPBG00000022932	TNRC6B	91	36.795	ENSCPBG00000001881	TNRC6A	91	36.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000022932	TNRC6B	99	87.587	ENSG00000100354	TNRC6B	99	86.150	Homo_sapiens
ENSCPBG00000022932	TNRC6B	99	87.239	ENSAMEG00000011025	TNRC6B	91	87.703	Ailuropoda_melanoleuca
ENSCPBG00000022932	TNRC6B	99	89.795	ENSAPLG00000009347	TNRC6B	92	89.421	Anas_platyrhynchos
ENSCPBG00000022932	TNRC6B	99	73.313	ENSACAG00000007281	TNRC6B	91	73.373	Anolis_carolinensis
ENSCPBG00000022932	TNRC6B	99	87.123	ENSANAG00000035042	TNRC6B	92	87.587	Aotus_nancymaae
ENSCPBG00000022932	TNRC6B	70	47.072	ENSAMXG00000008707	tnrc6b	83	43.523	Astyanax_mexicanus
ENSCPBG00000022932	TNRC6B	99	85.938	ENSBTAG00000021076	TNRC6B	92	86.227	Bos_taurus
ENSCPBG00000022932	TNRC6B	99	86.783	ENSCJAG00000002732	TNRC6B	92	87.074	Callithrix_jacchus
ENSCPBG00000022932	TNRC6B	99	86.763	ENSCAFG00000001255	TNRC6B	92	87.052	Canis_familiaris
ENSCPBG00000022932	TNRC6B	96	92.105	ENSCAFG00020002189	TNRC6B	92	92.105	Canis_lupus_dingo
ENSCPBG00000022932	TNRC6B	99	85.000	ENSCHIG00000003491	TNRC6B	91	85.417	Capra_hircus
ENSCPBG00000022932	TNRC6B	99	86.643	ENSTSYG00000011836	TNRC6B	92	86.702	Carlito_syrichta
ENSCPBG00000022932	TNRC6B	99	85.128	ENSCPOG00000005705	TNRC6B	91	84.890	Cavia_porcellus
ENSCPBG00000022932	TNRC6B	99	86.978	ENSCCAG00000019912	TNRC6B	94	87.571	Cebus_capucinus
ENSCPBG00000022932	TNRC6B	99	86.825	ENSCATG00000029291	TNRC6B	92	86.478	Cercocebus_atys
ENSCPBG00000022932	TNRC6B	99	84.753	ENSCLAG00000016942	TNRC6B	89	84.991	Chinchilla_lanigera
ENSCPBG00000022932	TNRC6B	99	82.627	ENSCSAG00000006021	TNRC6B	91	82.567	Chlorocebus_sabaeus
ENSCPBG00000022932	TNRC6B	99	87.290	ENSCANG00000030776	TNRC6B	92	87.232	Colobus_angolensis_palliatus
ENSCPBG00000022932	TNRC6B	99	84.327	ENSCGRG00001020166	Tnrc6b	92	84.267	Cricetulus_griseus_chok1gshd
ENSCPBG00000022932	TNRC6B	99	84.327	ENSCGRG00000016696	Tnrc6b	91	84.267	Cricetulus_griseus_crigri
ENSCPBG00000022932	TNRC6B	99	86.369	ENSDNOG00000012744	TNRC6B	91	86.485	Dasypus_novemcinctus
ENSCPBG00000022932	TNRC6B	99	85.322	ENSDORG00000003386	Tnrc6b	89	85.501	Dipodomys_ordii
ENSCPBG00000022932	TNRC6B	96	80.548	ENSETEG00000006570	TNRC6B	88	80.804	Echinops_telfairi
ENSCPBG00000022932	TNRC6B	100	85.242	ENSEASG00005005306	TNRC6B	92	86.234	Equus_asinus_asinus
ENSCPBG00000022932	TNRC6B	93	98.592	ENSECAG00000009759	TNRC6B	92	98.592	Equus_caballus
ENSCPBG00000022932	TNRC6B	56	92.035	ENSEEUG00000008690	-	52	90.333	Erinaceus_europaeus
ENSCPBG00000022932	TNRC6B	99	86.655	ENSFCAG00000004791	TNRC6B	92	86.828	Felis_catus
ENSCPBG00000022932	TNRC6B	96	90.106	ENSFALG00000012195	TNRC6B	92	89.795	Ficedula_albicollis
ENSCPBG00000022932	TNRC6B	99	85.280	ENSFDAG00000021368	TNRC6B	89	85.459	Fukomys_damarensis
ENSCPBG00000022932	TNRC6B	99	90.631	ENSGALG00000012050	TNRC6B	89	90.090	Gallus_gallus
ENSCPBG00000022932	TNRC6B	100	96.044	ENSGAGG00000025188	TNRC6B	91	96.044	Gopherus_agassizii
ENSCPBG00000022932	TNRC6B	99	87.529	ENSGGOG00000008444	TNRC6B	92	87.587	Gorilla_gorilla
ENSCPBG00000022932	TNRC6B	99	85.557	ENSHGLG00000009306	TNRC6B	93	85.581	Heterocephalus_glaber_female
ENSCPBG00000022932	TNRC6B	99	85.134	ENSHGLG00100018108	TNRC6B	90	84.836	Heterocephalus_glaber_male
ENSCPBG00000022932	TNRC6B	81	43.766	ENSIPUG00000001515	tnrc6b	85	45.493	Ictalurus_punctatus
ENSCPBG00000022932	TNRC6B	99	85.263	ENSSTOG00000008927	TNRC6B	89	85.501	Ictidomys_tridecemlineatus
ENSCPBG00000022932	TNRC6B	99	84.597	ENSJJAG00000015779	Tnrc6b	89	84.836	Jaculus_jaculus
ENSCPBG00000022932	TNRC6B	99	59.837	ENSLACG00000000628	-	91	60.654	Latimeria_chalumnae
ENSCPBG00000022932	TNRC6B	77	86.414	ENSLAFG00000014473	TNRC6B	91	87.082	Loxodonta_africana
ENSCPBG00000022932	TNRC6B	99	86.883	ENSMFAG00000003862	TNRC6B	92	86.538	Macaca_fascicularis
ENSCPBG00000022932	TNRC6B	99	86.567	ENSMMUG00000021345	TNRC6B	95	88.251	Macaca_mulatta
ENSCPBG00000022932	TNRC6B	99	86.507	ENSMNEG00000042745	TNRC6B	92	86.448	Macaca_nemestrina
ENSCPBG00000022932	TNRC6B	99	87.406	ENSMLEG00000041780	TNRC6B	92	87.348	Mandrillus_leucophaeus
ENSCPBG00000022932	TNRC6B	99	91.020	ENSMGAG00000012333	TNRC6B	92	90.671	Meleagris_gallopavo
ENSCPBG00000022932	TNRC6B	99	84.606	ENSMAUG00000016123	Tnrc6b	90	84.547	Mesocricetus_auratus
ENSCPBG00000022932	TNRC6B	99	86.964	ENSMICG00000014056	TNRC6B	97	87.085	Microcebus_murinus
ENSCPBG00000022932	TNRC6B	93	98.592	ENSMOCG00000020334	Tnrc6b	89	98.592	Microtus_ochrogaster
ENSCPBG00000022932	TNRC6B	99	84.606	MGP_CAROLIEiJ_G0020043	Tnrc6b	89	84.368	Mus_caroli
ENSCPBG00000022932	TNRC6B	99	84.606	ENSMUSG00000047888	Tnrc6b	89	84.308	Mus_musculus
ENSCPBG00000022932	TNRC6B	99	84.606	MGP_PahariEiJ_G0020045	Tnrc6b	89	84.308	Mus_pahari
ENSCPBG00000022932	TNRC6B	99	85.731	MGP_SPRETEiJ_G0020941	Tnrc6b	90	85.441	Mus_spretus
ENSCPBG00000022932	TNRC6B	97	87.151	ENSMPUG00000016442	TNRC6B	89	87.257	Mustela_putorius_furo
ENSCPBG00000022932	TNRC6B	99	86.578	ENSMLUG00000008765	TNRC6B	92	86.810	Myotis_lucifugus
ENSCPBG00000022932	TNRC6B	99	84.899	ENSNGAG00000021294	Tnrc6b	89	85.077	Nannospalax_galili
ENSCPBG00000022932	TNRC6B	89	87.840	ENSNLEG00000015311	TNRC6B	86	88.483	Nomascus_leucogenys
ENSCPBG00000022932	TNRC6B	90	83.178	ENSOPRG00000012054	TNRC6B	80	83.320	Ochotona_princeps
ENSCPBG00000022932	TNRC6B	99	85.238	ENSODEG00000013146	TNRC6B	89	85.357	Octodon_degus
ENSCPBG00000022932	TNRC6B	69	42.763	ENSONIG00000019679	-	90	45.129	Oreochromis_niloticus
ENSCPBG00000022932	TNRC6B	99	85.236	ENSOCUG00000016128	TNRC6B	89	85.535	Oryctolagus_cuniculus
ENSCPBG00000022932	TNRC6B	99	86.574	ENSOGAG00000011096	TNRC6B	92	86.632	Otolemur_garnettii
ENSCPBG00000022932	TNRC6B	99	84.775	ENSOARG00000017238	TNRC6B	90	85.130	Ovis_aries
ENSCPBG00000022932	TNRC6B	99	87.587	ENSPPAG00000028514	TNRC6B	92	87.645	Pan_paniscus
ENSCPBG00000022932	TNRC6B	99	87.123	ENSPPRG00000017741	TNRC6B	92	87.355	Panthera_pardus
ENSCPBG00000022932	TNRC6B	99	84.514	ENSPTIG00000022064	TNRC6B	91	85.957	Panthera_tigris_altaica
ENSCPBG00000022932	TNRC6B	99	87.580	ENSPTRG00000047826	TNRC6B	92	87.522	Pan_troglodytes
ENSCPBG00000022932	TNRC6B	99	81.846	ENSPANG00000009271	TNRC6B	92	83.333	Papio_anubis
ENSCPBG00000022932	TNRC6B	100	93.616	ENSPSIG00000005318	TNRC6B	92	93.616	Pelodiscus_sinensis
ENSCPBG00000022932	TNRC6B	99	84.038	ENSPEMG00000011403	Tnrc6b	89	84.157	Peromyscus_maniculatus_bairdii
ENSCPBG00000022932	TNRC6B	99	83.401	ENSPCIG00000020347	TNRC6B	92	83.285	Phascolarctos_cinereus
ENSCPBG00000022932	TNRC6B	93	47.202	ENSPFOG00000006033	-	91	39.475	Poecilia_formosa
ENSCPBG00000022932	TNRC6B	66	46.681	ENSPLAG00000001418	-	89	38.386	Poecilia_latipinna
ENSCPBG00000022932	TNRC6B	79	50.595	ENSPMEG00000006371	-	83	50.595	Poecilia_mexicana
ENSCPBG00000022932	TNRC6B	99	86.322	ENSPPYG00000011849	TNRC6B	91	86.260	Pongo_abelii
ENSCPBG00000022932	TNRC6B	71	97.872	ENSPCAG00000008739	TNRC6B	66	97.872	Procavia_capensis
ENSCPBG00000022932	TNRC6B	99	87.022	ENSPCOG00000020790	TNRC6B	95	87.862	Propithecus_coquereli
ENSCPBG00000022932	TNRC6B	94	88.933	ENSPVAG00000004975	TNRC6B	85	88.933	Pteropus_vampyrus
ENSCPBG00000022932	TNRC6B	78	46.228	ENSPNAG00000011713	tnrc6b	84	44.772	Pygocentrus_nattereri
ENSCPBG00000022932	TNRC6B	99	83.936	ENSRNOG00000024907	Tnrc6b	91	83.817	Rattus_norvegicus
ENSCPBG00000022932	TNRC6B	99	87.232	ENSRBIG00000035576	TNRC6B	92	87.174	Rhinopithecus_bieti
ENSCPBG00000022932	TNRC6B	99	87.174	ENSRROG00000031135	TNRC6B	92	87.115	Rhinopithecus_roxellana
ENSCPBG00000022932	TNRC6B	98	87.038	ENSSBOG00000029743	TNRC6B	91	87.331	Saimiri_boliviensis_boliviensis
ENSCPBG00000022932	TNRC6B	99	83.961	ENSSHAG00000009692	TNRC6B	92	83.555	Sarcophilus_harrisii
ENSCPBG00000022932	TNRC6B	70	82.051	ENSSARG00000007971	-	65	82.051	Sorex_araneus
ENSCPBG00000022932	TNRC6B	92	89.786	ENSSPUG00000010801	TNRC6B	92	89.470	Sphenodon_punctatus
ENSCPBG00000022932	TNRC6B	99	86.891	ENSSSCG00000000078	TNRC6B	90	87.181	Sus_scrofa
ENSCPBG00000022932	TNRC6B	99	89.095	ENSTGUG00000010138	-	98	88.786	Taeniopygia_guttata
ENSCPBG00000022932	TNRC6B	99	82.922	ENSTTRG00000011465	TNRC6B	89	83.231	Tursiops_truncatus
ENSCPBG00000022932	TNRC6B	99	85.655	ENSUAMG00000007174	TNRC6B	91	86.675	Ursus_americanus
ENSCPBG00000022932	TNRC6B	99	86.345	ENSUMAG00000014336	TNRC6B	92	86.643	Ursus_maritimus
ENSCPBG00000022932	TNRC6B	75	83.141	ENSVPAG00000001467	TNRC6B	71	83.141	Vicugna_pacos
ENSCPBG00000022932	TNRC6B	99	86.806	ENSVVUG00000007064	TNRC6B	91	86.250	Vulpes_vulpes
ENSCPBG00000022932	TNRC6B	59	46.078	ENSXCOG00000003042	-	97	48.877	Xiphophorus_couchianus