EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000023030 (Gene tree)
Gene ID: 101939843
Gene Symbol: POLR2F
Alias: HRBP14.4|RPB6
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 52719 bases
Position: chrKK088194.1:3420664-3473382
Accession: 9193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032842	RNA_pol_Rpb6	PF01192.22	3.8e-15	1	1
ENSCPBP00000032841	RNA_pol_Rpb6	PF01192.22	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000038631	POLR2F-202	1217	-	ENSCPBP00000032842	195 (aa)	XP_023955794	UPI000CE647B3
ENSCPBT00000038630	POLR2F-201	2420	-	ENSCPBP00000032841	207 (aa)	-	UPI0003890BD3

Gene Model

Click here to download ENSCPBG00000023030's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03020	RNA polymerase	KEGG
cpic04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023030	POLR2F	62	98.347	ENSG00000100142	POLR2F	100	98.980	Homo_sapiens
ENSCPBG00000023030	POLR2F	54	90.566	ENSAPOG00000002902	polr2f	83	90.566	Acanthochromis_polyacanthus
ENSCPBG00000023030	POLR2F	62	97.521	ENSAMEG00000010331	POLR2F	95	97.521	Ailuropoda_melanoleuca
ENSCPBG00000023030	POLR2F	54	90.566	ENSACIG00000000923	polr2f	83	90.566	Amphilophus_citrinellus
ENSCPBG00000023030	POLR2F	54	91.509	ENSAOCG00000003182	polr2f	83	91.509	Amphiprion_ocellaris
ENSCPBG00000023030	POLR2F	54	91.509	ENSAPEG00000012999	polr2f	83	91.509	Amphiprion_percula
ENSCPBG00000023030	POLR2F	54	90.566	ENSATEG00000008929	polr2f	83	90.566	Anabas_testudineus
ENSCPBG00000023030	POLR2F	62	98.333	ENSAPLG00000015235	POLR2F	96	98.333	Anas_platyrhynchos
ENSCPBG00000023030	POLR2F	62	99.174	ENSACAG00000015288	POLR2F	95	99.174	Anolis_carolinensis
ENSCPBG00000023030	POLR2F	62	98.347	ENSANAG00000020840	POLR2F	99	98.347	Aotus_nancymaae
ENSCPBG00000023030	POLR2F	54	91.509	ENSACLG00000016129	polr2f	83	91.509	Astatotilapia_calliptera
ENSCPBG00000023030	POLR2F	54	90.566	ENSAMXG00000012812	polr2f	83	90.566	Astyanax_mexicanus
ENSCPBG00000023030	POLR2F	62	98.347	ENSBTAG00000004820	POLR2F	95	98.347	Bos_taurus
ENSCPBG00000023030	POLR2F	62	98.347	ENSCJAG00000048241	POLR2F	99	98.347	Callithrix_jacchus
ENSCPBG00000023030	POLR2F	62	97.521	ENSCAFG00000001437	POLR2F	95	97.521	Canis_familiaris
ENSCPBG00000023030	POLR2F	62	99.167	ENSCHIG00000012907	POLR2F	94	99.167	Capra_hircus
ENSCPBG00000023030	POLR2F	62	97.521	ENSTSYG00000008187	POLR2F	95	97.521	Carlito_syrichta
ENSCPBG00000023030	POLR2F	62	99.167	ENSCAPG00000013419	POLR2F	94	99.167	Cavia_aperea
ENSCPBG00000023030	POLR2F	62	98.347	ENSCPOG00000034094	POLR2F	95	98.347	Cavia_porcellus
ENSCPBG00000023030	POLR2F	62	98.347	ENSCCAG00000036489	POLR2F	95	98.347	Cebus_capucinus
ENSCPBG00000023030	POLR2F	62	98.347	ENSCATG00000041014	POLR2F	99	98.347	Cercocebus_atys
ENSCPBG00000023030	POLR2F	62	99.167	ENSCLAG00000017167	POLR2F	95	98.347	Chinchilla_lanigera
ENSCPBG00000023030	POLR2F	62	98.347	ENSCSAG00000006862	POLR2F	95	98.347	Chlorocebus_sabaeus
ENSCPBG00000023030	POLR2F	54	74.528	ENSCING00000019359	-	73	75.962	Ciona_intestinalis
ENSCPBG00000023030	POLR2F	62	98.347	ENSCANG00000041884	POLR2F	99	98.347	Colobus_angolensis_palliatus
ENSCPBG00000023030	POLR2F	62	98.347	ENSCGRG00001023541	POLR2F	95	98.347	Cricetulus_griseus_chok1gshd
ENSCPBG00000023030	POLR2F	62	98.347	ENSCGRG00000011921	POLR2F	95	98.347	Cricetulus_griseus_crigri
ENSCPBG00000023030	POLR2F	54	91.509	ENSCSEG00000006848	polr2f	83	91.509	Cynoglossus_semilaevis
ENSCPBG00000023030	POLR2F	62	87.603	ENSCVAG00000010437	polr2f	83	90.566	Cyprinodon_variegatus
ENSCPBG00000023030	POLR2F	54	90.566	ENSDARG00000036625	polr2f	83	90.566	Danio_rerio
ENSCPBG00000023030	POLR2F	62	98.347	ENSDNOG00000005884	POLR2F	95	98.347	Dasypus_novemcinctus
ENSCPBG00000023030	POLR2F	62	98.347	ENSDORG00000024789	Polr2f	95	98.347	Dipodomys_ordii
ENSCPBG00000023030	POLR2F	52	72.115	FBgn0003275	RpII18	79	72.115	Drosophila_melanogaster
ENSCPBG00000023030	POLR2F	50	90.816	ENSEASG00005018802	-	88	90.816	Equus_asinus_asinus
ENSCPBG00000023030	POLR2F	62	95.868	ENSEEUG00000011014	POLR2F	95	95.868	Erinaceus_europaeus
ENSCPBG00000023030	POLR2F	54	89.623	ENSELUG00000000319	polr2f	83	89.623	Esox_lucius
ENSCPBG00000023030	POLR2F	62	97.521	ENSFCAG00000002806	POLR2F	99	97.521	Felis_catus
ENSCPBG00000023030	POLR2F	62	98.347	ENSFDAG00000009926	POLR2F	95	98.347	Fukomys_damarensis
ENSCPBG00000023030	POLR2F	57	90.090	ENSFHEG00000005448	polr2f	84	89.623	Fundulus_heteroclitus
ENSCPBG00000023030	POLR2F	62	82.645	ENSGMOG00000009967	polr2f	83	84.906	Gadus_morhua
ENSCPBG00000023030	POLR2F	62	97.521	ENSGALG00000012291	POLR2F	95	97.521	Gallus_gallus
ENSCPBG00000023030	POLR2F	62	86.777	ENSGAFG00000017573	polr2f	83	89.623	Gambusia_affinis
ENSCPBG00000023030	POLR2F	62	84.298	ENSGACG00000007322	polr2f	83	87.736	Gasterosteus_aculeatus
ENSCPBG00000023030	POLR2F	64	97.581	ENSGAGG00000021757	POLR2F	95	99.174	Gopherus_agassizii
ENSCPBG00000023030	POLR2F	62	98.347	ENSGGOG00000005213	POLR2F	99	98.347	Gorilla_gorilla
ENSCPBG00000023030	POLR2F	54	91.509	ENSHBUG00000022089	polr2f	83	91.509	Haplochromis_burtoni
ENSCPBG00000023030	POLR2F	62	98.347	ENSHGLG00000018942	POLR2F	95	98.347	Heterocephalus_glaber_female
ENSCPBG00000023030	POLR2F	62	99.167	ENSHGLG00100012851	POLR2F	95	98.347	Heterocephalus_glaber_male
ENSCPBG00000023030	POLR2F	54	87.736	ENSHCOG00000006149	polr2f	83	87.736	Hippocampus_comes
ENSCPBG00000023030	POLR2F	50	92.784	ENSIPUG00000000814	polr2f	100	92.784	Ictalurus_punctatus
ENSCPBG00000023030	POLR2F	62	98.347	ENSSTOG00000025722	POLR2F	95	98.347	Ictidomys_tridecemlineatus
ENSCPBG00000023030	POLR2F	62	98.347	ENSJJAG00000008097	Polr2f	95	98.347	Jaculus_jaculus
ENSCPBG00000023030	POLR2F	54	91.509	ENSKMAG00000014230	polr2f	83	91.509	Kryptolebias_marmoratus
ENSCPBG00000023030	POLR2F	54	89.623	ENSLBEG00000008383	polr2f	88	89.623	Labrus_bergylta
ENSCPBG00000023030	POLR2F	54	94.340	ENSLACG00000003931	POLR2F	83	94.340	Latimeria_chalumnae
ENSCPBG00000023030	POLR2F	54	88.991	ENSLOCG00000011827	polr2f	84	88.991	Lepisosteus_oculatus
ENSCPBG00000023030	POLR2F	62	98.347	ENSLAFG00000012632	POLR2F	95	98.347	Loxodonta_africana
ENSCPBG00000023030	POLR2F	62	98.347	ENSMFAG00000033687	POLR2F	99	98.347	Macaca_fascicularis
ENSCPBG00000023030	POLR2F	62	98.347	ENSMMUG00000038231	POLR2F	99	98.347	Macaca_mulatta
ENSCPBG00000023030	POLR2F	62	98.347	ENSMNEG00000044365	POLR2F	99	98.347	Macaca_nemestrina
ENSCPBG00000023030	POLR2F	62	98.347	ENSMLEG00000033077	POLR2F	99	98.347	Mandrillus_leucophaeus
ENSCPBG00000023030	POLR2F	54	91.509	ENSMAMG00000008056	polr2f	83	91.509	Mastacembelus_armatus
ENSCPBG00000023030	POLR2F	54	91.509	ENSMZEG00005005705	polr2f	83	91.509	Maylandia_zebra
ENSCPBG00000023030	POLR2F	62	97.521	ENSMGAG00000012504	POLR2F	95	97.521	Meleagris_gallopavo
ENSCPBG00000023030	POLR2F	62	98.347	ENSMAUG00000018586	Polr2f	95	98.347	Mesocricetus_auratus
ENSCPBG00000023030	POLR2F	62	98.347	ENSMICG00000013128	POLR2F	99	98.347	Microcebus_murinus
ENSCPBG00000023030	POLR2F	62	98.347	ENSMOCG00000000237	Polr2f	95	98.347	Microtus_ochrogaster
ENSCPBG00000023030	POLR2F	54	91.509	ENSMMOG00000005106	polr2f	83	91.509	Mola_mola
ENSCPBG00000023030	POLR2F	62	97.521	ENSMODG00000019063	POLR2F	95	97.521	Monodelphis_domestica
ENSCPBG00000023030	POLR2F	54	90.566	ENSMALG00000001444	polr2f	83	90.566	Monopterus_albus
ENSCPBG00000023030	POLR2F	62	97.521	MGP_CAROLIEiJ_G0020006	Polr2f	95	97.521	Mus_caroli
ENSCPBG00000023030	POLR2F	62	97.521	ENSMUSG00000033020	Polr2f	100	98.980	Mus_musculus
ENSCPBG00000023030	POLR2F	62	97.521	MGP_PahariEiJ_G0020008	Polr2f	95	97.521	Mus_pahari
ENSCPBG00000023030	POLR2F	62	97.521	MGP_SPRETEiJ_G0020904	Polr2f	95	97.521	Mus_spretus
ENSCPBG00000023030	POLR2F	62	97.521	ENSMPUG00000012997	POLR2F	95	97.521	Mustela_putorius_furo
ENSCPBG00000023030	POLR2F	62	95.935	ENSMLUG00000014315	-	95	95.935	Myotis_lucifugus
ENSCPBG00000023030	POLR2F	50	92.857	ENSMLUG00000029612	-	82	93.204	Myotis_lucifugus
ENSCPBG00000023030	POLR2F	62	98.347	ENSNGAG00000020682	Polr2f	95	98.347	Nannospalax_galili
ENSCPBG00000023030	POLR2F	54	90.566	ENSNBRG00000002492	polr2f	83	90.566	Neolamprologus_brichardi
ENSCPBG00000023030	POLR2F	62	98.347	ENSNLEG00000014987	-	99	98.347	Nomascus_leucogenys
ENSCPBG00000023030	POLR2F	62	98.347	ENSODEG00000014123	POLR2F	95	98.347	Octodon_degus
ENSCPBG00000023030	POLR2F	54	90.566	ENSONIG00000008394	polr2f	83	90.566	Oreochromis_niloticus
ENSCPBG00000023030	POLR2F	62	99.174	ENSOANG00000014684	POLR2F	95	99.174	Ornithorhynchus_anatinus
ENSCPBG00000023030	POLR2F	62	98.347	ENSOCUG00000012064	POLR2F	95	98.347	Oryctolagus_cuniculus
ENSCPBG00000023030	POLR2F	62	86.777	ENSORLG00000014580	polr2f	83	90.566	Oryzias_latipes
ENSCPBG00000023030	POLR2F	62	87.603	ENSORLG00020006910	polr2f	83	91.509	Oryzias_latipes_hni
ENSCPBG00000023030	POLR2F	69	65.035	ENSORLG00015015332	polr2f	63	89.247	Oryzias_latipes_hsok
ENSCPBG00000023030	POLR2F	62	98.347	ENSOGAG00000025463	POLR2F	95	98.347	Otolemur_garnettii
ENSCPBG00000023030	POLR2F	62	98.347	ENSOARG00000014692	POLR2F	95	98.347	Ovis_aries
ENSCPBG00000023030	POLR2F	62	98.347	ENSPPAG00000024276	POLR2F	99	98.347	Pan_paniscus
ENSCPBG00000023030	POLR2F	62	97.521	ENSPPRG00000013030	POLR2F	99	97.521	Panthera_pardus
ENSCPBG00000023030	POLR2F	62	95.041	ENSPTIG00000000632	POLR2F	99	95.041	Panthera_tigris_altaica
ENSCPBG00000023030	POLR2F	62	98.347	ENSPTRG00000014356	POLR2F	99	98.347	Pan_troglodytes
ENSCPBG00000023030	POLR2F	62	98.347	ENSPANG00000023979	POLR2F	99	98.347	Papio_anubis
ENSCPBG00000023030	POLR2F	54	90.566	ENSPKIG00000002464	polr2f	83	90.566	Paramormyrops_kingsleyae
ENSCPBG00000023030	POLR2F	54	91.509	ENSPMGG00000009619	polr2f	83	91.509	Periophthalmus_magnuspinnatus
ENSCPBG00000023030	POLR2F	62	98.347	ENSPEMG00000008322	Polr2f	95	98.347	Peromyscus_maniculatus_bairdii
ENSCPBG00000023030	POLR2F	62	97.521	ENSPCIG00000012000	-	95	97.521	Phascolarctos_cinereus
ENSCPBG00000023030	POLR2F	62	87.603	ENSPFOG00000000139	polr2f	83	90.566	Poecilia_formosa
ENSCPBG00000023030	POLR2F	62	87.603	ENSPLAG00000000988	polr2f	83	90.566	Poecilia_latipinna
ENSCPBG00000023030	POLR2F	62	87.603	ENSPMEG00000019063	polr2f	83	90.566	Poecilia_mexicana
ENSCPBG00000023030	POLR2F	62	98.347	ENSPPYG00000011809	POLR2F	95	98.347	Pongo_abelii
ENSCPBG00000023030	POLR2F	62	98.347	ENSPCOG00000025716	POLR2F	99	98.347	Propithecus_coquereli
ENSCPBG00000023030	POLR2F	54	91.509	ENSPNYG00000019790	polr2f	83	91.509	Pundamilia_nyererei
ENSCPBG00000023030	POLR2F	54	91.509	ENSPNAG00000009017	polr2f	83	91.509	Pygocentrus_nattereri
ENSCPBG00000023030	POLR2F	62	97.521	ENSRNOG00000011214	Polr2f	95	97.521	Rattus_norvegicus
ENSCPBG00000023030	POLR2F	62	98.347	ENSRBIG00000044878	POLR2F	99	98.347	Rhinopithecus_bieti
ENSCPBG00000023030	POLR2F	62	98.347	ENSRROG00000019586	POLR2F	99	98.347	Rhinopithecus_roxellana
ENSCPBG00000023030	POLR2F	51	63.366	YPR187W	RPO26	65	63.366	Saccharomyces_cerevisiae
ENSCPBG00000023030	POLR2F	62	98.347	ENSSBOG00000023340	POLR2F	99	98.347	Saimiri_boliviensis_boliviensis
ENSCPBG00000023030	POLR2F	62	97.521	ENSSHAG00000008502	POLR2F	95	97.521	Sarcophilus_harrisii
ENSCPBG00000023030	POLR2F	54	91.509	ENSSFOG00015012810	polr2f	83	91.509	Scleropages_formosus
ENSCPBG00000023030	POLR2F	54	90.566	ENSSMAG00000005354	polr2f	83	90.566	Scophthalmus_maximus
ENSCPBG00000023030	POLR2F	54	91.509	ENSSDUG00000016273	polr2f	83	91.509	Seriola_dumerili
ENSCPBG00000023030	POLR2F	54	91.509	ENSSLDG00000024895	polr2f	83	91.509	Seriola_lalandi_dorsalis
ENSCPBG00000023030	POLR2F	62	99.174	ENSSPUG00000011343	POLR2F	95	99.174	Sphenodon_punctatus
ENSCPBG00000023030	POLR2F	54	91.509	ENSSPAG00000019646	polr2f	83	91.509	Stegastes_partitus
ENSCPBG00000023030	POLR2F	62	97.521	ENSSSCG00000000116	POLR2F	95	97.521	Sus_scrofa
ENSCPBG00000023030	POLR2F	62	98.347	ENSTGUG00000010476	POLR2F	88	98.347	Taeniopygia_guttata
ENSCPBG00000023030	POLR2F	54	90.566	ENSTRUG00000021130	polr2f	60	90.566	Takifugu_rubripes
ENSCPBG00000023030	POLR2F	54	91.509	ENSTNIG00000010827	polr2f	83	91.509	Tetraodon_nigroviridis
ENSCPBG00000023030	POLR2F	62	97.521	ENSUAMG00000020504	POLR2F	95	97.521	Ursus_americanus
ENSCPBG00000023030	POLR2F	62	97.521	ENSUMAG00000015052	POLR2F	95	97.521	Ursus_maritimus
ENSCPBG00000023030	POLR2F	62	98.333	ENSVVUG00000024021	POLR2F	91	98.333	Vulpes_vulpes
ENSCPBG00000023030	POLR2F	54	94.340	ENSXETG00000006346	polr2f	83	94.340	Xenopus_tropicalis
ENSCPBG00000023030	POLR2F	62	87.603	ENSXCOG00000015983	polr2f	83	90.566	Xiphophorus_couchianus
ENSCPBG00000023030	POLR2F	62	87.603	ENSXMAG00000001559	polr2f	83	90.566	Xiphophorus_maculatus