EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000023060 (Gene tree)
Gene ID: 101936819
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5514 bases
Position: chrKK088194.1:3674692-3680205
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000032904	Nop25	PF09805.9	1.1e-18	1	1
ENSCPBP00000032903	Nop25	PF09805.9	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000038695	-	1826	-	ENSCPBP00000032904	211 (aa)	XP_005302526	UPI000388A4B7
ENSCPBT00000038694	-	2384	-	ENSCPBP00000032903	228 (aa)	-	UPI00046C39A5

Gene Model

Click here to download ENSCPBG00000023060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023060	-	97	66.190	ENSG00000273899	NOL12	97	66.190	Homo_sapiens
ENSCPBG00000023060	-	92	50.732	ENSAPOG00000006332	nol12	88	50.244	Acanthochromis_polyacanthus
ENSCPBG00000023060	-	96	65.854	ENSAMEG00000010139	-	97	65.854	Ailuropoda_melanoleuca
ENSCPBG00000023060	-	92	52.174	ENSACIG00000000239	nol12	89	51.643	Amphilophus_citrinellus
ENSCPBG00000023060	-	92	49.515	ENSAOCG00000004207	nol12	88	49.029	Amphiprion_ocellaris
ENSCPBG00000023060	-	92	49.515	ENSAPEG00000013488	nol12	88	49.029	Amphiprion_percula
ENSCPBG00000023060	-	92	52.427	ENSATEG00000009548	nol12	88	52.427	Anabas_testudineus
ENSCPBG00000023060	-	100	68.868	ENSACAG00000015549	-	98	70.048	Anolis_carolinensis
ENSCPBG00000023060	-	96	64.078	ENSANAG00000025653	-	95	64.078	Aotus_nancymaae
ENSCPBG00000023060	-	92	50.952	ENSACLG00000016476	nol12	89	51.942	Astatotilapia_calliptera
ENSCPBG00000023060	-	70	58.065	ENSAMXG00000041317	nol12	94	50.220	Astyanax_mexicanus
ENSCPBG00000023060	-	91	67.692	ENSBTAG00000051118	NOL12	95	69.189	Bos_taurus
ENSCPBG00000023060	-	97	61.429	ENSCJAG00000005559	-	94	61.429	Callithrix_jacchus
ENSCPBG00000023060	-	97	63.158	ENSCJAG00000012487	-	97	63.158	Callithrix_jacchus
ENSCPBG00000023060	-	97	65.238	ENSCAFG00000028770	-	97	65.714	Canis_familiaris
ENSCPBG00000023060	-	97	65.238	ENSCAFG00020003735	-	97	65.714	Canis_lupus_dingo
ENSCPBG00000023060	-	97	68.095	ENSCHIG00000021736	-	97	66.190	Capra_hircus
ENSCPBG00000023060	-	97	53.623	ENSTSYG00000036100	-	97	53.623	Carlito_syrichta
ENSCPBG00000023060	-	97	63.810	ENSTSYG00000008865	-	97	63.810	Carlito_syrichta
ENSCPBG00000023060	-	97	53.623	ENSTSYG00000027029	-	97	53.623	Carlito_syrichta
ENSCPBG00000023060	-	97	64.762	ENSCPOG00000037340	-	97	64.762	Cavia_porcellus
ENSCPBG00000023060	-	97	66.184	ENSCCAG00000033458	-	97	66.184	Cebus_capucinus
ENSCPBG00000023060	-	97	64.251	ENSCCAG00000034277	-	97	64.734	Cebus_capucinus
ENSCPBG00000023060	-	89	69.841	ENSCATG00000038470	-	97	65.238	Cercocebus_atys
ENSCPBG00000023060	-	97	64.115	ENSCLAG00000016784	-	97	62.679	Chinchilla_lanigera
ENSCPBG00000023060	-	97	65.714	ENSCSAG00000007256	-	97	64.286	Chlorocebus_sabaeus
ENSCPBG00000023060	-	97	66.986	ENSCANG00000027973	-	97	66.029	Colobus_angolensis_palliatus
ENSCPBG00000023060	-	97	63.981	ENSCGRG00001016078	Nol12	97	63.981	Cricetulus_griseus_chok1gshd
ENSCPBG00000023060	-	97	63.981	ENSCGRG00000007664	Nol12	97	63.981	Cricetulus_griseus_crigri
ENSCPBG00000023060	-	78	51.497	ENSCSEG00000007082	nol12	88	47.059	Cynoglossus_semilaevis
ENSCPBG00000023060	-	93	51.707	ENSCVAG00000004424	nol12	88	52.683	Cyprinodon_variegatus
ENSCPBG00000023060	-	93	47.642	ENSDARG00000038027	nol12	95	49.550	Danio_rerio
ENSCPBG00000023060	-	97	50.943	ENSDNOG00000007681	-	92	50.711	Dasypus_novemcinctus
ENSCPBG00000023060	-	97	59.809	ENSETEG00000008089	-	97	58.852	Echinops_telfairi
ENSCPBG00000023060	-	78	40.571	ENSEBUG00000008264	nol12	75	40.571	Eptatretus_burgeri
ENSCPBG00000023060	-	97	68.246	ENSEASG00005018821	-	97	66.825	Equus_asinus_asinus
ENSCPBG00000023060	-	97	67.299	ENSECAG00000032748	NOL12	97	65.877	Equus_caballus
ENSCPBG00000023060	-	97	67.476	ENSEEUG00000002597	-	97	66.019	Erinaceus_europaeus
ENSCPBG00000023060	-	98	51.802	ENSELUG00000008885	nol12	92	52.703	Esox_lucius
ENSCPBG00000023060	-	91	68.557	ENSFCAG00000038953	-	97	65.714	Felis_catus
ENSCPBG00000023060	-	99	68.664	ENSFALG00000012807	-	92	68.664	Ficedula_albicollis
ENSCPBG00000023060	-	97	64.115	ENSFDAG00000000919	-	97	64.115	Fukomys_damarensis
ENSCPBG00000023060	-	93	50.000	ENSFHEG00000005900	nol12	89	50.000	Fundulus_heteroclitus
ENSCPBG00000023060	-	92	49.261	ENSGMOG00000006313	nol12	87	48.276	Gadus_morhua
ENSCPBG00000023060	-	100	72.897	ENSGALG00000012410	-	100	72.897	Gallus_gallus
ENSCPBG00000023060	-	93	47.059	ENSGAFG00000017520	nol12	86	50.244	Gambusia_affinis
ENSCPBG00000023060	-	90	50.000	ENSGACG00000007246	nol12	85	50.000	Gasterosteus_aculeatus
ENSCPBG00000023060	-	100	94.787	ENSGAGG00000017727	-	100	94.787	Gopherus_agassizii
ENSCPBG00000023060	-	97	67.143	ENSGGOG00000040937	-	94	69.780	Gorilla_gorilla
ENSCPBG00000023060	-	92	50.952	ENSHBUG00000021873	nol12	89	51.456	Haplochromis_burtoni
ENSCPBG00000023060	-	91	62.245	ENSHGLG00000015482	-	97	61.611	Heterocephalus_glaber_female
ENSCPBG00000023060	-	91	62.245	ENSHGLG00100003937	-	97	61.611	Heterocephalus_glaber_male
ENSCPBG00000023060	-	91	50.739	ENSHCOG00000005941	nol12	86	50.971	Hippocampus_comes
ENSCPBG00000023060	-	100	49.573	ENSIPUG00000000672	nol12	100	49.573	Ictalurus_punctatus
ENSCPBG00000023060	-	97	66.351	ENSSTOG00000028960	-	97	65.403	Ictidomys_tridecemlineatus
ENSCPBG00000023060	-	93	53.695	ENSKMAG00000014033	nol12	89	53.695	Kryptolebias_marmoratus
ENSCPBG00000023060	-	100	58.605	ENSLACG00000005267	-	99	59.535	Latimeria_chalumnae
ENSCPBG00000023060	-	97	64.904	ENSLAFG00000010072	-	97	64.904	Loxodonta_africana
ENSCPBG00000023060	-	89	70.370	ENSMFAG00000006832	-	97	65.238	Macaca_fascicularis
ENSCPBG00000023060	-	89	69.841	ENSMMUG00000047489	NOL12	97	64.762	Macaca_mulatta
ENSCPBG00000023060	-	89	70.370	ENSMNEG00000016463	-	97	65.238	Macaca_nemestrina
ENSCPBG00000023060	-	92	51.942	ENSMAMG00000008197	nol12	88	51.905	Mastacembelus_armatus
ENSCPBG00000023060	-	92	51.429	ENSMZEG00005005326	nol12	89	52.427	Maylandia_zebra
ENSCPBG00000023060	-	94	72.414	ENSMGAG00000012548	-	100	70.642	Meleagris_gallopavo
ENSCPBG00000023060	-	99	63.084	ENSMAUG00000020440	Nol12	99	63.084	Mesocricetus_auratus
ENSCPBG00000023060	-	97	65.217	ENSMICG00000033461	-	97	65.217	Microcebus_murinus
ENSCPBG00000023060	-	97	64.423	ENSMOCG00000021388	Nol12	97	62.981	Microtus_ochrogaster
ENSCPBG00000023060	-	92	53.431	ENSMMOG00000005012	nol12	88	52.941	Mola_mola
ENSCPBG00000023060	-	97	60.648	ENSMODG00000000273	-	96	59.722	Monodelphis_domestica
ENSCPBG00000023060	-	100	50.667	ENSMALG00000001721	nol12	95	49.130	Monopterus_albus
ENSCPBG00000023060	-	93	67.000	MGP_CAROLIEiJ_G0019998	Nol12	99	62.673	Mus_caroli
ENSCPBG00000023060	-	93	67.000	ENSMUSG00000033099	Nol12	99	62.673	Mus_musculus
ENSCPBG00000023060	-	99	64.815	MGP_PahariEiJ_G0020000	Nol12	99	62.963	Mus_pahari
ENSCPBG00000023060	-	99	64.352	MGP_SPRETEiJ_G0020896	Nol12	99	62.500	Mus_spretus
ENSCPBG00000023060	-	97	64.593	ENSMPUG00000012830	-	97	65.072	Mustela_putorius_furo
ENSCPBG00000023060	-	97	65.714	ENSMLUG00000014280	-	97	64.762	Myotis_lucifugus
ENSCPBG00000023060	-	93	51.208	ENSNBRG00000002104	nol12	89	50.725	Neolamprologus_brichardi
ENSCPBG00000023060	-	97	50.000	ENSNLEG00000014859	-	97	50.481	Nomascus_leucogenys
ENSCPBG00000023060	-	88	63.102	ENSMEUG00000000228	-	100	63.102	Notamacropus_eugenii
ENSCPBG00000023060	-	73	61.635	ENSOPRG00000013360	-	100	61.006	Ochotona_princeps
ENSCPBG00000023060	-	87	63.978	ENSODEG00000000101	-	95	65.027	Octodon_degus
ENSCPBG00000023060	-	92	51.905	ENSONIG00000008373	nol12	89	52.427	Oreochromis_niloticus
ENSCPBG00000023060	-	86	74.317	ENSOANG00000005801	-	97	74.317	Ornithorhynchus_anatinus
ENSCPBG00000023060	-	97	61.905	ENSOCUG00000017013	-	97	60.476	Oryctolagus_cuniculus
ENSCPBG00000023060	-	93	48.058	ENSORLG00000014684	nol12	88	50.490	Oryzias_latipes
ENSCPBG00000023060	-	93	49.510	ENSORLG00020006235	nol12	88	50.980	Oryzias_latipes_hni
ENSCPBG00000023060	-	92	49.510	ENSORLG00015018366	nol12	88	52.451	Oryzias_latipes_hsok
ENSCPBG00000023060	-	93	48.571	ENSOMEG00000006905	nol12	88	50.481	Oryzias_melastigma
ENSCPBG00000023060	-	97	66.038	ENSOGAG00000008255	-	97	63.208	Otolemur_garnettii
ENSCPBG00000023060	-	97	67.619	ENSOARG00000013969	-	97	65.714	Ovis_aries
ENSCPBG00000023060	-	97	65.714	ENSPPAG00000032357	-	97	65.714	Pan_paniscus
ENSCPBG00000023060	-	97	65.714	ENSPPRG00000024913	-	97	65.238	Panthera_pardus
ENSCPBG00000023060	-	97	66.190	ENSPTIG00000012596	-	97	65.238	Panthera_tigris_altaica
ENSCPBG00000023060	-	97	65.238	ENSPTRG00000014345	NOL12	97	65.238	Pan_troglodytes
ENSCPBG00000023060	-	97	66.986	ENSPANG00000033918	-	97	65.550	Papio_anubis
ENSCPBG00000023060	-	92	54.589	ENSPKIG00000007375	nol12	100	51.770	Paramormyrops_kingsleyae
ENSCPBG00000023060	-	93	87.817	ENSPSIG00000012103	-	99	88.208	Pelodiscus_sinensis
ENSCPBG00000023060	-	66	56.338	ENSPMGG00000009583	nol12	83	53.191	Periophthalmus_magnuspinnatus
ENSCPBG00000023060	-	91	66.667	ENSPEMG00000010657	Nol12	97	63.850	Peromyscus_maniculatus_bairdii
ENSCPBG00000023060	-	91	50.481	ENSPFOG00000022176	nol12	86	50.943	Poecilia_formosa
ENSCPBG00000023060	-	93	50.962	ENSPLAG00000023807	nol12	88	50.962	Poecilia_latipinna
ENSCPBG00000023060	-	93	48.571	ENSPMEG00000018335	nol12	86	50.943	Poecilia_mexicana
ENSCPBG00000023060	-	97	66.986	ENSPCAG00000000561	-	97	66.986	Procavia_capensis
ENSCPBG00000023060	-	97	65.700	ENSPCOG00000014514	-	97	65.700	Propithecus_coquereli
ENSCPBG00000023060	-	100	64.815	ENSPVAG00000010097	-	100	63.889	Pteropus_vampyrus
ENSCPBG00000023060	-	92	50.952	ENSPNYG00000020267	nol12	89	51.456	Pundamilia_nyererei
ENSCPBG00000023060	-	94	50.481	ENSPNAG00000023112	nol12	89	51.923	Pygocentrus_nattereri
ENSCPBG00000023060	-	99	65.741	ENSRNOG00000010209	Nol12	99	63.889	Rattus_norvegicus
ENSCPBG00000023060	-	89	70.370	ENSRBIG00000042117	-	97	65.714	Rhinopithecus_bieti
ENSCPBG00000023060	-	89	70.370	ENSRROG00000037912	-	97	65.714	Rhinopithecus_roxellana
ENSCPBG00000023060	-	97	64.423	ENSSBOG00000036236	-	97	64.423	Saimiri_boliviensis_boliviensis
ENSCPBG00000023060	-	92	54.106	ENSSFOG00015012468	nol12	98	52.252	Scleropages_formosus
ENSCPBG00000023060	-	92	47.887	ENSSMAG00000004745	nol12	88	50.239	Scophthalmus_maximus
ENSCPBG00000023060	-	92	52.174	ENSSDUG00000016769	nol12	88	53.140	Seriola_dumerili
ENSCPBG00000023060	-	92	52.427	ENSSLDG00000024826	nol12	88	52.913	Seriola_lalandi_dorsalis
ENSCPBG00000023060	-	100	74.408	ENSSPUG00000011564	-	100	74.408	Sphenodon_punctatus
ENSCPBG00000023060	-	92	49.519	ENSSPAG00000007292	nol12	88	49.524	Stegastes_partitus
ENSCPBG00000023060	-	97	65.714	ENSSSCG00000021663	-	97	65.714	Sus_scrofa
ENSCPBG00000023060	-	100	72.222	ENSTGUG00000010526	NOL12	97	72.685	Taeniopygia_guttata
ENSCPBG00000023060	-	100	49.550	ENSTRUG00000019689	nol12	97	51.351	Takifugu_rubripes
ENSCPBG00000023060	-	98	52.968	ENSTNIG00000010836	nol12	90	52.968	Tetraodon_nigroviridis
ENSCPBG00000023060	-	97	60.476	ENSTBEG00000009745	-	97	59.524	Tupaia_belangeri
ENSCPBG00000023060	-	91	59.794	ENSTTRG00000004799	-	94	58.763	Tursiops_truncatus
ENSCPBG00000023060	-	99	65.888	ENSUAMG00000020483	-	99	64.953	Ursus_americanus
ENSCPBG00000023060	-	99	65.421	ENSUMAG00000015210	-	99	64.486	Ursus_maritimus
ENSCPBG00000023060	-	97	65.550	ENSVVUG00000023997	-	97	66.029	Vulpes_vulpes
ENSCPBG00000023060	-	100	53.953	ENSXETG00000015984	nol12	100	53.953	Xenopus_tropicalis
ENSCPBG00000023060	-	93	49.756	ENSXCOG00000015936	nol12	85	51.724	Xiphophorus_couchianus
ENSCPBG00000023060	-	93	49.268	ENSXMAG00000006120	nol12	85	51.232	Xiphophorus_maculatus