EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000023184 (Gene tree)
Gene ID: 101948221
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 17361 bases
Position: chrKK088194.1:6859709-6877069
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000033081	RtcB	PF01139.17	4.7e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000038889	RTCB-201	2707	XM_005300812	ENSCPBP00000033081	505 (aa)	XP_005300869	UPI000388CE19

Gene Model

Click here to download ENSCPBG00000023184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023184	RTCB	100	96.634	ENSG00000100220	RTCB	100	96.634	Homo_sapiens
ENSCPBG00000023184	RTCB	100	93.069	ENSAPOG00000006040	rtcb	100	93.069	Acanthochromis_polyacanthus
ENSCPBG00000023184	RTCB	100	96.436	ENSAMEG00000016152	RTCB	100	96.436	Ailuropoda_melanoleuca
ENSCPBG00000023184	RTCB	100	89.109	ENSACIG00000009083	rtcb	100	89.109	Amphilophus_citrinellus
ENSCPBG00000023184	RTCB	100	93.465	ENSAOCG00000005662	rtcb	100	94.783	Amphiprion_ocellaris
ENSCPBG00000023184	RTCB	96	89.117	ENSAPEG00000024653	rtcb	100	89.117	Amphiprion_percula
ENSCPBG00000023184	RTCB	100	93.465	ENSAPEG00000024701	rtcb	100	93.465	Amphiprion_percula
ENSCPBG00000023184	RTCB	100	94.059	ENSATEG00000000618	rtcb	100	94.059	Anabas_testudineus
ENSCPBG00000023184	RTCB	100	94.220	ENSACAG00000014817	RTCB	100	94.220	Anolis_carolinensis
ENSCPBG00000023184	RTCB	72	94.444	ENSANAG00000023724	-	100	61.067	Aotus_nancymaae
ENSCPBG00000023184	RTCB	100	80.990	ENSANAG00000018191	-	91	80.990	Aotus_nancymaae
ENSCPBG00000023184	RTCB	100	92.871	ENSACLG00000008367	rtcb	100	93.696	Astatotilapia_calliptera
ENSCPBG00000023184	RTCB	100	93.861	ENSAMXG00000042320	rtcb	100	93.861	Astyanax_mexicanus
ENSCPBG00000023184	RTCB	100	96.634	ENSBTAG00000011070	RTCB	100	96.634	Bos_taurus
ENSCPBG00000023184	RTCB	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSCPBG00000023184	RTCB	100	96.436	ENSCJAG00000006128	RTCB	100	96.436	Callithrix_jacchus
ENSCPBG00000023184	RTCB	100	92.079	ENSCAFG00000010789	-	100	92.079	Canis_familiaris
ENSCPBG00000023184	RTCB	100	96.436	ENSCAFG00000001785	RTCB	100	96.436	Canis_familiaris
ENSCPBG00000023184	RTCB	87	92.500	ENSCAFG00020018953	-	99	92.500	Canis_lupus_dingo
ENSCPBG00000023184	RTCB	100	96.436	ENSCAFG00020004890	-	100	96.436	Canis_lupus_dingo
ENSCPBG00000023184	RTCB	100	96.634	ENSCHIG00000027009	-	100	96.634	Capra_hircus
ENSCPBG00000023184	RTCB	100	97.030	ENSTSYG00000012320	RTCB	100	97.030	Carlito_syrichta
ENSCPBG00000023184	RTCB	94	97.890	ENSCAPG00000011647	RTCB	96	97.890	Cavia_aperea
ENSCPBG00000023184	RTCB	100	96.436	ENSCCAG00000000618	RTCB	100	96.436	Cebus_capucinus
ENSCPBG00000023184	RTCB	100	96.436	ENSCATG00000033424	RTCB	100	96.436	Cercocebus_atys
ENSCPBG00000023184	RTCB	100	96.634	ENSCLAG00000007997	RTCB	100	96.634	Chinchilla_lanigera
ENSCPBG00000023184	RTCB	100	96.238	ENSCSAG00000008351	RTCB	100	96.238	Chlorocebus_sabaeus
ENSCPBG00000023184	RTCB	100	81.980	ENSCHOG00000009123	RTCB	100	81.980	Choloepus_hoffmanni
ENSCPBG00000023184	RTCB	100	81.188	ENSCING00000003830	-	100	81.188	Ciona_intestinalis
ENSCPBG00000023184	RTCB	100	81.584	ENSCSAVG00000008124	-	100	80.638	Ciona_savignyi
ENSCPBG00000023184	RTCB	100	92.871	ENSCANG00000001891	RTCB	100	92.871	Colobus_angolensis_palliatus
ENSCPBG00000023184	RTCB	100	96.634	ENSCGRG00001011173	Rtcb	100	96.634	Cricetulus_griseus_chok1gshd
ENSCPBG00000023184	RTCB	93	97.452	ENSCGRG00000009587	-	96	97.452	Cricetulus_griseus_crigri
ENSCPBG00000023184	RTCB	100	93.069	ENSCSEG00000003986	rtcb	100	93.069	Cynoglossus_semilaevis
ENSCPBG00000023184	RTCB	82	92.788	ENSCVAG00000000569	rtcb	95	92.788	Cyprinodon_variegatus
ENSCPBG00000023184	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSCPBG00000023184	RTCB	80	93.366	ENSDNOG00000012425	RTCB	99	93.366	Dasypus_novemcinctus
ENSCPBG00000023184	RTCB	100	96.832	ENSDORG00000010855	Rtcb	100	96.832	Dipodomys_ordii
ENSCPBG00000023184	RTCB	99	85.089	FBgn0032781	RtcB	99	85.089	Drosophila_melanogaster
ENSCPBG00000023184	RTCB	100	89.901	ENSETEG00000001988	RTCB	100	89.901	Echinops_telfairi
ENSCPBG00000023184	RTCB	100	85.149	ENSEBUG00000014235	rtcb	100	85.149	Eptatretus_burgeri
ENSCPBG00000023184	RTCB	100	96.832	ENSEASG00005019059	RTCB	100	96.832	Equus_asinus_asinus
ENSCPBG00000023184	RTCB	100	96.832	ENSECAG00000023998	RTCB	100	96.832	Equus_caballus
ENSCPBG00000023184	RTCB	88	88.789	ENSEEUG00000006251	RTCB	99	88.789	Erinaceus_europaeus
ENSCPBG00000023184	RTCB	100	82.987	ENSELUG00000009275	rtcb	100	82.987	Esox_lucius
ENSCPBG00000023184	RTCB	100	96.634	ENSFCAG00000026480	RTCB	100	96.634	Felis_catus
ENSCPBG00000023184	RTCB	100	97.822	ENSFALG00000013334	RTCB	100	97.822	Ficedula_albicollis
ENSCPBG00000023184	RTCB	100	96.436	ENSFDAG00000018150	RTCB	100	96.436	Fukomys_damarensis
ENSCPBG00000023184	RTCB	100	93.861	ENSFHEG00000009595	rtcb	100	93.861	Fundulus_heteroclitus
ENSCPBG00000023184	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSCPBG00000023184	RTCB	100	98.218	ENSGALG00000012611	RTCB	100	98.218	Gallus_gallus
ENSCPBG00000023184	RTCB	100	93.465	ENSGAFG00000004198	rtcb	100	93.465	Gambusia_affinis
ENSCPBG00000023184	RTCB	100	93.267	ENSGACG00000000586	rtcb	100	93.267	Gasterosteus_aculeatus
ENSCPBG00000023184	RTCB	93	98.936	ENSGAGG00000019133	RTCB	98	98.936	Gopherus_agassizii
ENSCPBG00000023184	RTCB	100	96.634	ENSGGOG00000011402	RTCB	100	96.634	Gorilla_gorilla
ENSCPBG00000023184	RTCB	100	92.871	ENSHBUG00000020571	rtcb	100	92.871	Haplochromis_burtoni
ENSCPBG00000023184	RTCB	93	69.510	ENSHGLG00000001066	-	99	69.510	Heterocephalus_glaber_female
ENSCPBG00000023184	RTCB	100	96.436	ENSHGLG00000004492	RTCB	100	96.436	Heterocephalus_glaber_female
ENSCPBG00000023184	RTCB	100	96.436	ENSHGLG00100008965	RTCB	100	96.436	Heterocephalus_glaber_male
ENSCPBG00000023184	RTCB	100	91.913	ENSHCOG00000006450	rtcb	100	91.913	Hippocampus_comes
ENSCPBG00000023184	RTCB	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSCPBG00000023184	RTCB	100	96.238	ENSSTOG00000003878	RTCB	100	96.238	Ictidomys_tridecemlineatus
ENSCPBG00000023184	RTCB	100	96.436	ENSJJAG00000010667	Rtcb	100	96.436	Jaculus_jaculus
ENSCPBG00000023184	RTCB	100	93.465	ENSKMAG00000013178	rtcb	100	93.465	Kryptolebias_marmoratus
ENSCPBG00000023184	RTCB	100	93.663	ENSLBEG00000010566	RTCB	100	93.663	Labrus_bergylta
ENSCPBG00000023184	RTCB	100	92.673	ENSLBEG00000000214	rtcb	100	92.673	Labrus_bergylta
ENSCPBG00000023184	RTCB	100	96.238	ENSLACG00000013033	RTCB	100	96.238	Latimeria_chalumnae
ENSCPBG00000023184	RTCB	100	94.257	ENSLOCG00000016515	rtcb	99	94.257	Lepisosteus_oculatus
ENSCPBG00000023184	RTCB	100	96.238	ENSLAFG00000002082	RTCB	100	96.238	Loxodonta_africana
ENSCPBG00000023184	RTCB	100	96.238	ENSMFAG00000034419	RTCB	100	96.238	Macaca_fascicularis
ENSCPBG00000023184	RTCB	100	96.238	ENSMMUG00000006720	RTCB	100	96.238	Macaca_mulatta
ENSCPBG00000023184	RTCB	100	96.238	ENSMNEG00000040669	RTCB	100	96.238	Macaca_nemestrina
ENSCPBG00000023184	RTCB	100	96.436	ENSMLEG00000040505	RTCB	100	96.436	Mandrillus_leucophaeus
ENSCPBG00000023184	RTCB	100	93.465	ENSMAMG00000020676	rtcb	100	93.465	Mastacembelus_armatus
ENSCPBG00000023184	RTCB	100	92.871	ENSMZEG00005018942	rtcb	100	92.871	Maylandia_zebra
ENSCPBG00000023184	RTCB	100	97.830	ENSMGAG00000012805	RTCB	100	97.830	Meleagris_gallopavo
ENSCPBG00000023184	RTCB	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSCPBG00000023184	RTCB	100	96.436	ENSMICG00000013303	-	100	96.436	Microcebus_murinus
ENSCPBG00000023184	RTCB	100	77.426	ENSMICG00000036677	-	100	77.426	Microcebus_murinus
ENSCPBG00000023184	RTCB	100	96.634	ENSMOCG00000002440	Rtcb	100	96.634	Microtus_ochrogaster
ENSCPBG00000023184	RTCB	100	93.861	ENSMMOG00000005987	rtcb	100	93.861	Mola_mola
ENSCPBG00000023184	RTCB	100	97.624	ENSMODG00000001414	RTCB	100	97.624	Monodelphis_domestica
ENSCPBG00000023184	RTCB	100	93.267	ENSMALG00000007603	rtcb	100	93.267	Monopterus_albus
ENSCPBG00000023184	RTCB	100	96.634	MGP_CAROLIEiJ_G0015689	Rtcb	100	96.634	Mus_caroli
ENSCPBG00000023184	RTCB	100	96.634	ENSMUSG00000001783	Rtcb	100	96.634	Mus_musculus
ENSCPBG00000023184	RTCB	100	96.634	MGP_PahariEiJ_G0031396	Rtcb	100	96.634	Mus_pahari
ENSCPBG00000023184	RTCB	100	96.634	MGP_SPRETEiJ_G0016507	Rtcb	100	96.634	Mus_spretus
ENSCPBG00000023184	RTCB	100	96.436	ENSMPUG00000012285	RTCB	100	96.436	Mustela_putorius_furo
ENSCPBG00000023184	RTCB	100	93.688	ENSMLUG00000007803	RTCB	100	93.688	Myotis_lucifugus
ENSCPBG00000023184	RTCB	75	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSCPBG00000023184	RTCB	100	93.069	ENSNBRG00000017202	rtcb	100	93.069	Neolamprologus_brichardi
ENSCPBG00000023184	RTCB	100	96.634	ENSNLEG00000004960	RTCB	100	96.634	Nomascus_leucogenys
ENSCPBG00000023184	RTCB	100	71.881	ENSMEUG00000007809	-	100	71.881	Notamacropus_eugenii
ENSCPBG00000023184	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCPBG00000023184	RTCB	100	64.356	ENSODEG00000005042	-	100	64.356	Octodon_degus
ENSCPBG00000023184	RTCB	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSCPBG00000023184	RTCB	100	94.059	ENSONIG00000007474	rtcb	100	94.059	Oreochromis_niloticus
ENSCPBG00000023184	RTCB	100	97.228	ENSOANG00000005524	RTCB	100	97.228	Ornithorhynchus_anatinus
ENSCPBG00000023184	RTCB	93	96.383	ENSOCUG00000008270	RTCB	96	96.383	Oryctolagus_cuniculus
ENSCPBG00000023184	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSCPBG00000023184	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSCPBG00000023184	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSCPBG00000023184	RTCB	100	93.267	ENSOMEG00000021278	rtcb	100	93.267	Oryzias_melastigma
ENSCPBG00000023184	RTCB	100	95.842	ENSOGAG00000001425	RTCB	100	95.842	Otolemur_garnettii
ENSCPBG00000023184	RTCB	100	96.634	ENSOARG00000018008	RTCB	100	96.634	Ovis_aries
ENSCPBG00000023184	RTCB	100	96.634	ENSPPAG00000028667	RTCB	100	96.634	Pan_paniscus
ENSCPBG00000023184	RTCB	100	96.634	ENSPPRG00000004038	RTCB	100	96.634	Panthera_pardus
ENSCPBG00000023184	RTCB	94	93.895	ENSPTIG00000020499	RTCB	97	93.895	Panthera_tigris_altaica
ENSCPBG00000023184	RTCB	100	96.634	ENSPTRG00000014287	RTCB	100	96.634	Pan_troglodytes
ENSCPBG00000023184	RTCB	100	96.238	ENSPANG00000016035	RTCB	100	96.238	Papio_anubis
ENSCPBG00000023184	RTCB	100	92.871	ENSPKIG00000001881	rtcb	100	92.871	Paramormyrops_kingsleyae
ENSCPBG00000023184	RTCB	91	99.565	ENSPSIG00000011690	RTCB	100	99.565	Pelodiscus_sinensis
ENSCPBG00000023184	RTCB	100	93.267	ENSPMGG00000016672	rtcb	100	93.267	Periophthalmus_magnuspinnatus
ENSCPBG00000023184	RTCB	100	96.634	ENSPEMG00000019548	Rtcb	100	96.634	Peromyscus_maniculatus_bairdii
ENSCPBG00000023184	RTCB	100	91.287	ENSPMAG00000005657	rtcb	100	91.287	Petromyzon_marinus
ENSCPBG00000023184	RTCB	100	97.228	ENSPCIG00000009467	RTCB	100	97.228	Phascolarctos_cinereus
ENSCPBG00000023184	RTCB	100	93.861	ENSPFOG00000003058	rtcb	100	93.861	Poecilia_formosa
ENSCPBG00000023184	RTCB	100	93.861	ENSPLAG00000017663	rtcb	100	93.861	Poecilia_latipinna
ENSCPBG00000023184	RTCB	100	93.861	ENSPMEG00000006227	rtcb	100	93.861	Poecilia_mexicana
ENSCPBG00000023184	RTCB	100	93.663	ENSPREG00000018467	rtcb	100	93.663	Poecilia_reticulata
ENSCPBG00000023184	RTCB	100	96.634	ENSPPYG00000011752	RTCB	100	96.634	Pongo_abelii
ENSCPBG00000023184	RTCB	93	79.449	ENSPCAG00000013641	RTCB	100	79.449	Procavia_capensis
ENSCPBG00000023184	RTCB	100	96.436	ENSPCOG00000017243	RTCB	100	96.436	Propithecus_coquereli
ENSCPBG00000023184	RTCB	93	95.532	ENSPVAG00000002380	RTCB	100	95.532	Pteropus_vampyrus
ENSCPBG00000023184	RTCB	100	92.871	ENSPNYG00000022760	rtcb	100	92.871	Pundamilia_nyererei
ENSCPBG00000023184	RTCB	100	94.059	ENSPNAG00000009209	rtcb	100	94.059	Pygocentrus_nattereri
ENSCPBG00000023184	RTCB	100	96.634	ENSRNOG00000004813	Rtcb	100	96.634	Rattus_norvegicus
ENSCPBG00000023184	RTCB	100	87.549	ENSRBIG00000042090	RTCB	100	87.549	Rhinopithecus_bieti
ENSCPBG00000023184	RTCB	100	91.683	ENSSBOG00000020085	-	100	91.683	Saimiri_boliviensis_boliviensis
ENSCPBG00000023184	RTCB	94	97.679	ENSSHAG00000016277	RTCB	100	97.679	Sarcophilus_harrisii
ENSCPBG00000023184	RTCB	100	93.069	ENSSFOG00015011572	RTCB	100	93.069	Scleropages_formosus
ENSCPBG00000023184	RTCB	100	92.475	ENSSFOG00015000763	rtcb	100	92.475	Scleropages_formosus
ENSCPBG00000023184	RTCB	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSCPBG00000023184	RTCB	100	93.069	ENSSDUG00000012605	rtcb	100	93.069	Seriola_dumerili
ENSCPBG00000023184	RTCB	100	93.069	ENSSLDG00000019458	rtcb	100	93.069	Seriola_lalandi_dorsalis
ENSCPBG00000023184	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSCPBG00000023184	RTCB	100	97.426	ENSSPUG00000012814	RTCB	100	97.426	Sphenodon_punctatus
ENSCPBG00000023184	RTCB	100	93.465	ENSSPAG00000004623	rtcb	100	93.465	Stegastes_partitus
ENSCPBG00000023184	RTCB	100	96.634	ENSSSCG00000000158	RTCB	100	96.634	Sus_scrofa
ENSCPBG00000023184	RTCB	100	97.822	ENSTGUG00000010947	RTCB	99	97.822	Taeniopygia_guttata
ENSCPBG00000023184	RTCB	91	94.565	ENSTRUG00000009880	rtcb	100	94.565	Takifugu_rubripes
ENSCPBG00000023184	RTCB	100	92.277	ENSTNIG00000002484	rtcb	100	92.277	Tetraodon_nigroviridis
ENSCPBG00000023184	RTCB	100	83.564	ENSTBEG00000004418	RTCB	100	83.564	Tupaia_belangeri
ENSCPBG00000023184	RTCB	93	96.170	ENSTTRG00000006417	RTCB	100	96.170	Tursiops_truncatus
ENSCPBG00000023184	RTCB	100	96.436	ENSUAMG00000022792	RTCB	100	96.436	Ursus_americanus
ENSCPBG00000023184	RTCB	100	96.436	ENSUMAG00000017225	RTCB	100	96.436	Ursus_maritimus
ENSCPBG00000023184	RTCB	100	96.436	ENSVPAG00000005375	RTCB	100	96.436	Vicugna_pacos
ENSCPBG00000023184	RTCB	100	96.436	ENSVVUG00000023408	RTCB	100	98.034	Vulpes_vulpes
ENSCPBG00000023184	RTCB	100	94.851	ENSXETG00000011523	rtcb	100	94.851	Xenopus_tropicalis
ENSCPBG00000023184	RTCB	100	93.465	ENSXMAG00000002855	rtcb	100	93.465	Xiphophorus_maculatus