EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCPBG00000023291 (Gene tree)
Gene ID
101953077
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Chrysemys_picta_bellii
Status
putative
Strand
Plus strand
Length
2745 bases
Position
chrKK088195.1:810184-812928
Accession
6601
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPBP00000033291RNA_ligasePF09414.105.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPBT00000039114LIG4-2012745-ENSCPBP00000033291914 (aa)XP_005305050UPI000388C672
Gene Model
Click here to download ENSCPBG00000023291's gene model file
Pathways
Pathway IDPathway NameSource
cpic03450Non-homologous end-joiningKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023291's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPBG00000023291LIG410079.303ENSG00000174405LIG410079.787Homo_sapiens
ENSCPBG00000023291LIG410068.053ENSAPOG00000000866lig49968.701Acanthochromis_polyacanthus
ENSCPBG00000023291LIG49975.873ENSAMEG00000019685LIG49976.354Ailuropoda_melanoleuca
ENSCPBG00000023291LIG49969.003ENSACIG00000018309lig49869.556Amphilophus_citrinellus
ENSCPBG00000023291LIG410067.943ENSAOCG00000011768lig49968.590Amphiprion_ocellaris
ENSCPBG00000023291LIG410068.053ENSAPEG00000017815lig49968.701Amphiprion_percula
ENSCPBG00000023291LIG410068.415ENSATEG00000005583lig49968.882Anabas_testudineus
ENSCPBG00000023291LIG49683.636ENSAPLG00000001673LIG49983.636Anas_platyrhynchos
ENSCPBG00000023291LIG49983.388ENSACAG00000014566LIG49983.832Anolis_carolinensis
ENSCPBG00000023291LIG410078.649ENSANAG00000012446LIG49979.249Aotus_nancymaae
ENSCPBG00000023291LIG49968.127ENSACLG00000027051lig49868.667Astatotilapia_calliptera
ENSCPBG00000023291LIG49968.018ENSAMXG00000008192lig49368.701Astyanax_mexicanus
ENSCPBG00000023291LIG410076.906ENSBTAG00000015868LIG49977.483Bos_taurus
ENSCPBG00000023291LIG410078.214ENSCJAG00000014689LIG49978.808Callithrix_jacchus
ENSCPBG00000023291LIG410077.124ENSCAFG00000006031LIG49977.594Canis_familiaris
ENSCPBG00000023291LIG410077.124ENSCAFG00020021230LIG49977.594Canis_lupus_dingo
ENSCPBG00000023291LIG410076.253ENSCHIG00000001019LIG49976.821Capra_hircus
ENSCPBG00000023291LIG49977.901ENSCAPG00000006284LIG49977.901Cavia_aperea
ENSCPBG00000023291LIG410077.124ENSCPOG00000014266LIG49977.704Cavia_porcellus
ENSCPBG00000023291LIG410079.085ENSCCAG00000019971LIG49979.691Cebus_capucinus
ENSCPBG00000023291LIG49979.276ENSCATG00000021075LIG49979.581Cercocebus_atys
ENSCPBG00000023291LIG49977.303ENSCLAG00000003376LIG49977.704Chinchilla_lanigera
ENSCPBG00000023291LIG410079.412ENSCSAG00000000211LIG49979.912Chlorocebus_sabaeus
ENSCPBG00000023291LIG46945.950ENSCING00000009536-9646.434Ciona_intestinalis
ENSCPBG00000023291LIG48346.781ENSCSAVG00000010336-9846.781Ciona_savignyi
ENSCPBG00000023291LIG410078.758ENSCANG00000005805LIG49979.249Colobus_angolensis_palliatus
ENSCPBG00000023291LIG49976.232ENSCGRG00001012072Lig49976.380Cricetulus_griseus_chok1gshd
ENSCPBG00000023291LIG49976.232ENSCGRG00000013417Lig49976.380Cricetulus_griseus_crigri
ENSCPBG00000023291LIG49768.450ENSCSEG00000013905lig49569.118Cynoglossus_semilaevis
ENSCPBG00000023291LIG410069.071ENSCVAG00000007896lig49969.734Cyprinodon_variegatus
ENSCPBG00000023291LIG410067.287ENSDARG00000060620lig49867.889Danio_rerio
ENSCPBG00000023291LIG410078.105ENSDNOG00000000513LIG49978.698Dasypus_novemcinctus
ENSCPBG00000023291LIG49978.146ENSDORG00000027303Lig49978.146Dipodomys_ordii
ENSCPBG00000023291LIG48832.742FBgn0030506Lig49032.742Drosophila_melanogaster
ENSCPBG00000023291LIG49875.664ENSETEG00000015563LIG410075.996Echinops_telfairi
ENSCPBG00000023291LIG49942.992ENSEBUG00000014243lig49843.432Eptatretus_burgeri
ENSCPBG00000023291LIG410077.778ENSEASG00005022073LIG49978.366Equus_asinus_asinus
ENSCPBG00000023291LIG410077.342ENSECAG00000003257LIG49977.925Equus_caballus
ENSCPBG00000023291LIG49969.912ENSELUG00000006787lig49970.432Esox_lucius
ENSCPBG00000023291LIG410076.663ENSFCAG00000031985LIG49977.238Felis_catus
ENSCPBG00000023291LIG48983.313ENSFALG00000004214LIG49783.706Ficedula_albicollis
ENSCPBG00000023291LIG410077.015ENSFDAG00000008973LIG49977.594Fukomys_damarensis
ENSCPBG00000023291LIG410068.162ENSFHEG00000007398lig48968.701Fundulus_heteroclitus
ENSCPBG00000023291LIG48566.366ENSGMOG00000012843lig49966.366Gadus_morhua
ENSCPBG00000023291LIG410083.388ENSGALG00000016854LIG49983.628Gallus_gallus
ENSCPBG00000023291LIG49869.308ENSGAFG00000019779lig49569.145Gambusia_affinis
ENSCPBG00000023291LIG49966.117ENSGACG00000014135lig49966.593Gasterosteus_aculeatus
ENSCPBG00000023291LIG410079.085ENSGGOG00000027771LIG49979.691Gorilla_gorilla
ENSCPBG00000023291LIG49967.908ENSHBUG00000006245lig49868.444Haplochromis_burtoni
ENSCPBG00000023291LIG410077.015ENSHGLG00000000718LIG49977.594Heterocephalus_glaber_female
ENSCPBG00000023291LIG410077.015ENSHGLG00100003265LIG49977.594Heterocephalus_glaber_male
ENSCPBG00000023291LIG49868.368ENSHCOG00000012010lig49868.368Hippocampus_comes
ENSCPBG00000023291LIG410067.760ENSIPUG00000013748lig49968.031Ictalurus_punctatus
ENSCPBG00000023291LIG49977.985ENSSTOG00000024303LIG49978.256Ictidomys_tridecemlineatus
ENSCPBG00000023291LIG49977.741ENSJJAG00000006750Lig49978.146Jaculus_jaculus
ENSCPBG00000023291LIG410067.068ENSKMAG00000001149lig49967.703Kryptolebias_marmoratus
ENSCPBG00000023291LIG49168.313ENSLBEG00000014578lig410068.313Labrus_bergylta
ENSCPBG00000023291LIG410076.368ENSLACG00000003282LIG49976.855Latimeria_chalumnae
ENSCPBG00000023291LIG410072.350ENSLOCG00000008901lig49772.949Lepisosteus_oculatus
ENSCPBG00000023291LIG49977.596ENSLAFG00000031152LIG49977.839Loxodonta_africana
ENSCPBG00000023291LIG410079.085ENSMFAG00000037235LIG49979.581Macaca_fascicularis
ENSCPBG00000023291LIG410079.085ENSMMUG00000008874LIG49979.581Macaca_mulatta
ENSCPBG00000023291LIG410079.085ENSMNEG00000023575LIG49979.581Macaca_nemestrina
ENSCPBG00000023291LIG410079.194ENSMLEG00000026720LIG49979.691Mandrillus_leucophaeus
ENSCPBG00000023291LIG410068.928ENSMAMG00000008472lig49869.478Mastacembelus_armatus
ENSCPBG00000023291LIG49968.127ENSMZEG00005001855lig49868.667Maylandia_zebra
ENSCPBG00000023291LIG410084.481ENSMGAG00000015532LIG49984.735Meleagris_gallopavo
ENSCPBG00000023291LIG49975.356ENSMOCG00000019000Lig49975.497Microtus_ochrogaster
ENSCPBG00000023291LIG410066.958ENSMMOG00000004390lig49967.814Mola_mola
ENSCPBG00000023291LIG49979.167ENSMODG00000025064LIG49979.824Monodelphis_domestica
ENSCPBG00000023291LIG410068.162ENSMALG00000008555lig49968.812Monopterus_albus
ENSCPBG00000023291LIG410076.471MGP_CAROLIEiJ_G0030809Lig49976.932Mus_caroli
ENSCPBG00000023291LIG410075.817ENSMUSG00000049717Lig49976.269Mus_musculus
ENSCPBG00000023291LIG410076.362MGP_PahariEiJ_G0021270Lig49976.821Mus_pahari
ENSCPBG00000023291LIG410075.926MGP_SPRETEiJ_G0031917Lig49976.380Mus_spretus
ENSCPBG00000023291LIG49976.451ENSMPUG00000018675LIG49976.685Mustela_putorius_furo
ENSCPBG00000023291LIG410077.669ENSMLUG00000001267LIG49978.256Myotis_lucifugus
ENSCPBG00000023291LIG49977.459ENSNGAG00000013258Lig49977.459Nannospalax_galili
ENSCPBG00000023291LIG49968.018ENSNBRG00000021252lig49868.556Neolamprologus_brichardi
ENSCPBG00000023291LIG410078.758ENSNLEG00000007888LIG49979.360Nomascus_leucogenys
ENSCPBG00000023291LIG410075.381ENSOPRG00000005765LIG49975.938Ochotona_princeps
ENSCPBG00000023291LIG410076.445ENSODEG00000019683LIG49977.017Octodon_degus
ENSCPBG00000023291LIG49967.908ENSONIG00000011969lig49768.444Oreochromis_niloticus
ENSCPBG00000023291LIG410076.906ENSOCUG00000015734LIG49977.594Oryctolagus_cuniculus
ENSCPBG00000023291LIG410067.756ENSORLG00000004041lig49968.322Oryzias_latipes
ENSCPBG00000023291LIG410068.192ENSORLG00020019607lig49968.764Oryzias_latipes_hni
ENSCPBG00000023291LIG410067.538ENSORLG00015017754lig49968.102Oryzias_latipes_hsok
ENSCPBG00000023291LIG47572.674ENSOMEG00000003459lig49873.817Oryzias_melastigma
ENSCPBG00000023291LIG410077.317ENSOGAG00000032120LIG49977.987Otolemur_garnettii
ENSCPBG00000023291LIG48279.760ENSOARG00000005590LIG49780.514Ovis_aries
ENSCPBG00000023291LIG410079.085ENSPPAG00000032998LIG49979.691Pan_paniscus
ENSCPBG00000023291LIG410077.233ENSPPRG00000017804LIG49977.815Panthera_pardus
ENSCPBG00000023291LIG410077.124ENSPTIG00000010051LIG49977.704Panthera_tigris_altaica
ENSCPBG00000023291LIG410079.194ENSPTRG00000006025LIG49979.801Pan_troglodytes
ENSCPBG00000023291LIG49979.386ENSPANG00000007562LIG49979.691Papio_anubis
ENSCPBG00000023291LIG410069.037ENSPKIG00000011645lig49869.546Paramormyrops_kingsleyae
ENSCPBG00000023291LIG410094.311ENSPSIG00000001504LIG49994.463Pelodiscus_sinensis
ENSCPBG00000023291LIG49866.890ENSPMGG00000013486lig49866.741Periophthalmus_magnuspinnatus
ENSCPBG00000023291LIG49976.342ENSPEMG00000000076Lig49976.490Peromyscus_maniculatus_bairdii
ENSCPBG00000023291LIG49979.080ENSPCIG00000021882LIG49979.249Phascolarctos_cinereus
ENSCPBG00000023291LIG49869.308ENSPFOG00000000797lig49869.145Poecilia_formosa
ENSCPBG00000023291LIG49869.196ENSPLAG00000001196lig49869.034Poecilia_latipinna
ENSCPBG00000023291LIG49869.308ENSPMEG00000021353lig49869.145Poecilia_mexicana
ENSCPBG00000023291LIG49868.973ENSPREG00000007323lig49868.812Poecilia_reticulata
ENSCPBG00000023291LIG410078.867ENSPPYG00000005540LIG49979.470Pongo_abelii
ENSCPBG00000023291LIG410077.124ENSPVAG00000016403LIG49977.594Pteropus_vampyrus
ENSCPBG00000023291LIG49967.908ENSPNYG00000009660lig49868.556Pundamilia_nyererei
ENSCPBG00000023291LIG49969.145ENSPNAG00000028056lig49969.145Pygocentrus_nattereri
ENSCPBG00000023291LIG49969.145ENSPNAG00000028069LIG49969.145Pygocentrus_nattereri
ENSCPBG00000023291LIG49975.329ENSRNOG00000014605Lig49975.717Rattus_norvegicus
ENSCPBG00000023291LIG410077.669ENSRBIG00000039962LIG49978.146Rhinopithecus_bieti
ENSCPBG00000023291LIG410078.649ENSRROG00000006040LIG49979.139Rhinopithecus_roxellana
ENSCPBG00000023291LIG410078.214ENSSBOG00000019029LIG49978.808Saimiri_boliviensis_boliviensis
ENSCPBG00000023291LIG49976.645ENSSHAG00000009525LIG49977.263Sarcophilus_harrisii
ENSCPBG00000023291LIG410069.147ENSSFOG00015012835lig49969.811Scleropages_formosus
ENSCPBG00000023291LIG410065.755ENSSMAG00000011267lig49966.371Scophthalmus_maximus
ENSCPBG00000023291LIG410067.904ENSSDUG00000010343lig49868.625Seriola_dumerili
ENSCPBG00000023291LIG410066.594ENSSLDG00000003239lig49967.220Seriola_lalandi_dorsalis
ENSCPBG00000023291LIG410074.729ENSSARG00000006573LIG49975.358Sorex_araneus
ENSCPBG00000023291LIG49287.767ENSSPUG00000002444LIG410087.767Sphenodon_punctatus
ENSCPBG00000023291LIG410067.505ENSSPAG00000001609lig49968.257Stegastes_partitus
ENSCPBG00000023291LIG49977.058ENSSSCG00000009540LIG49977.459Sus_scrofa
ENSCPBG00000023291LIG49982.541ENSTGUG00000010795LIG49982.522Taeniopygia_guttata
ENSCPBG00000023291LIG410067.541ENSTRUG00000009984lig49968.182Takifugu_rubripes
ENSCPBG00000023291LIG410067.505ENSTNIG00000010348lig49968.479Tetraodon_nigroviridis
ENSCPBG00000023291LIG410078.540ENSTBEG00000017741LIG49979.139Tupaia_belangeri
ENSCPBG00000023291LIG410077.233ENSTTRG00000012660LIG49977.815Tursiops_truncatus
ENSCPBG00000023291LIG49975.904ENSUAMG00000003773LIG49976.243Ursus_americanus
ENSCPBG00000023291LIG410075.383ENSXETG00000002654lig49975.748Xenopus_tropicalis
ENSCPBG00000023291LIG49869.196ENSXCOG00000017401lig49869.034Xiphophorus_couchianus
ENSCPBG00000023291LIG49869.420ENSXMAG00000015142lig49869.256Xiphophorus_maculatus

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