EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000023418 (Gene tree)
Gene ID: 101937412
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 22889 bases
Position: chr3:7058214-7081102
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	1	7
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	2	7
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	3	7
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	4	7
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	5	7
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	6	7
ENSCPBP00000033489	zf-C2H2	PF00096.26	6.9e-44	7	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	1	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	2	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	3	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	4	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	5	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	6	7
ENSCPBP00000033491	zf-C2H2	PF00096.26	8.6e-44	7	7
ENSCPBP00000033489	zf-met	PF12874.7	3.1e-14	1	1
ENSCPBP00000033491	zf-met	PF12874.7	3.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000039335	-	3541	-	ENSCPBP00000033491	981 (aa)	-	-
ENSCPBT00000039333	-	3674	XM_005287445	ENSCPBP00000033489	968 (aa)	XP_005287502	UPI000388B00F

Gene Model

Click here to download ENSCPBG00000023418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000023418	-	67	38.735	ENSCPBG00000005586	-	65	38.735
ENSCPBG00000023418	-	53	43.523	ENSCPBG00000002014	-	53	42.574
ENSCPBG00000023418	-	51	45.631	ENSCPBG00000003774	-	91	45.200
ENSCPBG00000023418	-	51	46.032	ENSCPBG00000002430	-	83	49.324
ENSCPBG00000023418	-	64	31.674	ENSCPBG00000028270	ZBTB41	59	31.677
ENSCPBG00000023418	-	61	49.735	ENSCPBG00000012976	-	98	42.763
ENSCPBG00000023418	-	54	39.423	ENSCPBG00000024735	PRDM5	80	41.667
ENSCPBG00000023418	-	58	38.318	ENSCPBG00000008580	-	96	41.485
ENSCPBG00000023418	-	50	45.000	ENSCPBG00000004990	-	100	41.797
ENSCPBG00000023418	-	50	47.368	ENSCPBG00000003130	-	97	44.395
ENSCPBG00000023418	-	61	43.913	ENSCPBG00000017494	-	84	43.913
ENSCPBG00000023418	-	50	35.294	ENSCPBG00000004542	ZNF865	80	33.987
ENSCPBG00000023418	-	63	35.439	ENSCPBG00000026947	ZNF319	91	35.616
ENSCPBG00000023418	-	50	44.371	ENSCPBG00000026433	-	76	45.455
ENSCPBG00000023418	-	61	42.143	ENSCPBG00000004030	-	79	44.560
ENSCPBG00000023418	-	78	54.698	ENSCPBG00000023415	GZF1	85	54.698
ENSCPBG00000023418	-	62	47.222	ENSCPBG00000001181	-	98	47.222
ENSCPBG00000023418	-	51	40.078	ENSCPBG00000001526	-	88	40.078
ENSCPBG00000023418	-	65	43.750	ENSCPBG00000017489	-	95	43.750
ENSCPBG00000023418	-	65	45.178	ENSCPBG00000001421	-	99	45.178
ENSCPBG00000023418	-	52	31.724	ENSCPBG00000009609	-	72	35.691
ENSCPBG00000023418	-	67	42.231	ENSCPBG00000015500	-	92	42.918
ENSCPBG00000023418	-	61	43.617	ENSCPBG00000016841	-	97	44.805
ENSCPBG00000023418	-	61	48.101	ENSCPBG00000021479	-	84	45.294
ENSCPBG00000023418	-	78	43.023	ENSCPBG00000016039	MYNN	93	42.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023418	-	72	54.138	ENSG00000125812	GZF1	94	51.572	Homo_sapiens
ENSCPBG00000023418	-	70	42.680	ENSAPOG00000012930	GZF1	93	46.398	Acanthochromis_polyacanthus
ENSCPBG00000023418	-	63	50.512	ENSAMEG00000009853	GZF1	89	50.512	Ailuropoda_melanoleuca
ENSCPBG00000023418	-	70	45.078	ENSACIG00000004753	-	55	49.533	Amphilophus_citrinellus
ENSCPBG00000023418	-	69	42.574	ENSAOCG00000024275	GZF1	73	50.000	Amphiprion_ocellaris
ENSCPBG00000023418	-	71	42.446	ENSAPEG00000017195	GZF1	54	50.156	Amphiprion_percula
ENSCPBG00000023418	-	83	42.038	ENSATEG00000018374	GZF1	98	51.556	Anabas_testudineus
ENSCPBG00000023418	-	68	54.483	ENSANAG00000028240	GZF1	89	51.887	Aotus_nancymaae
ENSCPBG00000023418	-	67	45.524	ENSACLG00000025866	GZF1	54	49.536	Astatotilapia_calliptera
ENSCPBG00000023418	-	87	43.038	ENSAMXG00000017178	GZF1	83	52.500	Astyanax_mexicanus
ENSCPBG00000023418	-	70	53.115	ENSCJAG00000000733	GZF1	70	50.751	Callithrix_jacchus
ENSCPBG00000023418	-	68	46.537	ENSCAFG00000005142	GZF1	89	54.483	Canis_familiaris
ENSCPBG00000023418	-	67	53.793	ENSTSYG00000028054	GZF1	87	50.459	Carlito_syrichta
ENSCPBG00000023418	-	63	53.082	ENSCAPG00000002173	GZF1	87	52.492	Cavia_aperea
ENSCPBG00000023418	-	63	53.082	ENSCPOG00000010790	GZF1	87	52.492	Cavia_porcellus
ENSCPBG00000023418	-	68	54.483	ENSCCAG00000035601	GZF1	70	51.887	Cebus_capucinus
ENSCPBG00000023418	-	68	54.138	ENSCATG00000039279	GZF1	89	51.572	Cercocebus_atys
ENSCPBG00000023418	-	63	53.082	ENSCLAG00000014714	GZF1	60	52.492	Chinchilla_lanigera
ENSCPBG00000023418	-	68	54.138	ENSCSAG00000011054	GZF1	89	51.572	Chlorocebus_sabaeus
ENSCPBG00000023418	-	68	54.138	ENSCANG00000041260	GZF1	89	51.572	Colobus_angolensis_palliatus
ENSCPBG00000023418	-	50	54.138	ENSCGRG00001003944	Gzf1	90	54.138	Cricetulus_griseus_chok1gshd
ENSCPBG00000023418	-	50	54.138	ENSCGRG00000012721	Gzf1	90	54.138	Cricetulus_griseus_crigri
ENSCPBG00000023418	-	88	40.185	ENSCSEG00000002270	GZF1	69	49.346	Cynoglossus_semilaevis
ENSCPBG00000023418	-	67	48.415	ENSCVAG00000013068	-	73	49.688	Cyprinodon_variegatus
ENSCPBG00000023418	-	68	53.691	ENSDORG00000011855	Gzf1	90	52.751	Dipodomys_ordii
ENSCPBG00000023418	-	55	55.351	ENSEBUG00000004858	GZF1	77	55.351	Eptatretus_burgeri
ENSCPBG00000023418	-	73	48.899	ENSELUG00000013581	GZF1	86	48.899	Esox_lucius
ENSCPBG00000023418	-	80	54.483	ENSFCAG00000006484	GZF1	89	54.483	Felis_catus
ENSCPBG00000023418	-	77	53.425	ENSFDAG00000019468	GZF1	91	52.824	Fukomys_damarensis
ENSCPBG00000023418	-	61	49.505	ENSGMOG00000011017	GZF1	99	49.505	Gadus_morhua
ENSCPBG00000023418	-	84	54.362	ENSGALG00000053640	GZF1	95	54.362	Gallus_gallus
ENSCPBG00000023418	-	69	76.673	ENSGALG00000053659	-	100	76.673	Gallus_gallus
ENSCPBG00000023418	-	64	48.105	ENSGAFG00000008725	GZF1	53	49.688	Gambusia_affinis
ENSCPBG00000023418	-	69	43.832	ENSGACG00000012415	GZF1	96	56.614	Gasterosteus_aculeatus
ENSCPBG00000023418	-	72	54.138	ENSGGOG00000023248	GZF1	75	51.572	Gorilla_gorilla
ENSCPBG00000023418	-	67	45.524	ENSHBUG00000016502	-	58	49.536	Haplochromis_burtoni
ENSCPBG00000023418	-	77	53.082	ENSHGLG00000008891	GZF1	86	53.082	Heterocephalus_glaber_female
ENSCPBG00000023418	-	77	53.082	ENSHGLG00100015117	GZF1	86	53.082	Heterocephalus_glaber_male
ENSCPBG00000023418	-	85	44.504	ENSHCOG00000004326	GZF1	85	39.031	Hippocampus_comes
ENSCPBG00000023418	-	75	54.483	ENSSTOG00000009820	GZF1	86	51.887	Ictidomys_tridecemlineatus
ENSCPBG00000023418	-	83	54.483	ENSJJAG00000008172	Gzf1	95	51.682	Jaculus_jaculus
ENSCPBG00000023418	-	53	41.640	ENSKMAG00000001453	-	58	56.989	Kryptolebias_marmoratus
ENSCPBG00000023418	-	68	45.918	ENSLBEG00000025803	-	52	50.000	Labrus_bergylta
ENSCPBG00000023418	-	88	47.353	ENSLAFG00000002458	GZF1	95	53.145	Loxodonta_africana
ENSCPBG00000023418	-	68	54.138	ENSMFAG00000042408	GZF1	89	51.572	Macaca_fascicularis
ENSCPBG00000023418	-	68	54.138	ENSMMUG00000022387	GZF1	89	51.572	Macaca_mulatta
ENSCPBG00000023418	-	68	54.138	ENSMNEG00000033117	GZF1	89	51.572	Macaca_nemestrina
ENSCPBG00000023418	-	68	54.138	ENSMLEG00000036831	GZF1	89	51.572	Mandrillus_leucophaeus
ENSCPBG00000023418	-	93	44.709	ENSMAMG00000011931	-	75	48.910	Mastacembelus_armatus
ENSCPBG00000023418	-	67	45.524	ENSMZEG00005010711	-	55	49.536	Maylandia_zebra
ENSCPBG00000023418	-	64	90.357	ENSMGAG00000003137	GZF1	100	90.357	Meleagris_gallopavo
ENSCPBG00000023418	-	79	52.941	ENSMAUG00000019656	Gzf1	100	53.405	Mesocricetus_auratus
ENSCPBG00000023418	-	75	48.315	ENSMICG00000046070	GZF1	89	52.201	Microcebus_murinus
ENSCPBG00000023418	-	77	53.793	ENSMOCG00000017816	Gzf1	90	53.793	Microtus_ochrogaster
ENSCPBG00000023418	-	93	52.055	ENSMMOG00000004395	-	74	50.000	Mola_mola
ENSCPBG00000023418	-	65	92.739	ENSMODG00000006238	GZF1	100	92.182	Monodelphis_domestica
ENSCPBG00000023418	-	50	55.172	MGP_CAROLIEiJ_G0024409	Gzf1	90	52.516	Mus_caroli
ENSCPBG00000023418	-	66	55.517	ENSMUSG00000027439	Gzf1	90	55.034	Mus_musculus
ENSCPBG00000023418	-	77	54.483	ENSMPUG00000001160	GZF1	77	53.846	Mustela_putorius_furo
ENSCPBG00000023418	-	76	49.658	ENSMLUG00000002194	GZF1	87	47.500	Myotis_lucifugus
ENSCPBG00000023418	-	73	49.008	ENSNGAG00000024012	Gzf1	87	51.524	Nannospalax_galili
ENSCPBG00000023418	-	82	42.328	ENSNBRG00000019987	GZF1	97	46.644	Neolamprologus_brichardi
ENSCPBG00000023418	-	68	54.138	ENSNLEG00000011565	GZF1	70	51.572	Nomascus_leucogenys
ENSCPBG00000023418	-	65	53.512	ENSOPRG00000004697	GZF1	89	50.305	Ochotona_princeps
ENSCPBG00000023418	-	83	47.945	ENSODEG00000013020	GZF1	50	47.945	Octodon_degus
ENSCPBG00000023418	-	85	43.457	ENSONIG00000000989	GZF1	99	50.654	Oreochromis_niloticus
ENSCPBG00000023418	-	63	72.394	ENSOANG00000022376	-	97	71.955	Ornithorhynchus_anatinus
ENSCPBG00000023418	-	83	48.851	ENSOCUG00000025214	GZF1	89	52.941	Oryctolagus_cuniculus
ENSCPBG00000023418	-	72	47.383	ENSOGAG00000028389	GZF1	89	54.828	Otolemur_garnettii
ENSCPBG00000023418	-	73	53.691	ENSPPAG00000028487	GZF1	74	51.887	Pan_paniscus
ENSCPBG00000023418	-	80	54.483	ENSPPRG00000010040	GZF1	89	54.483	Panthera_pardus
ENSCPBG00000023418	-	80	54.483	ENSPTIG00000019328	GZF1	89	54.483	Panthera_tigris_altaica
ENSCPBG00000023418	-	73	53.691	ENSPTRG00000013320	GZF1	74	51.887	Pan_troglodytes
ENSCPBG00000023418	-	68	54.138	ENSPANG00000017419	GZF1	89	51.572	Papio_anubis
ENSCPBG00000023418	-	89	42.584	ENSPKIG00000003781	GZF1	82	43.590	Paramormyrops_kingsleyae
ENSCPBG00000023418	-	97	88.663	ENSPSIG00000014208	-	99	88.556	Pelodiscus_sinensis
ENSCPBG00000023418	-	63	40.288	ENSPMGG00000003778	-	66	40.288	Periophthalmus_magnuspinnatus
ENSCPBG00000023418	-	67	51.368	ENSPCIG00000013803	GZF1	88	51.368	Phascolarctos_cinereus
ENSCPBG00000023418	-	69	44.332	ENSPFOG00000002393	GZF1	99	48.438	Poecilia_formosa
ENSCPBG00000023418	-	56	44.133	ENSPLAG00000005232	GZF1	93	43.577	Poecilia_latipinna
ENSCPBG00000023418	-	69	41.436	ENSPMEG00000020017	-	55	41.436	Poecilia_mexicana
ENSCPBG00000023418	-	69	47.985	ENSPREG00000016398	GZF1	51	47.985	Poecilia_reticulata
ENSCPBG00000023418	-	67	54.138	ENSPPYG00000010766	GZF1	88	51.572	Pongo_abelii
ENSCPBG00000023418	-	63	53.103	ENSPCAG00000007544	GZF1	98	52.685	Procavia_capensis
ENSCPBG00000023418	-	68	54.483	ENSPCOG00000024180	GZF1	89	51.887	Propithecus_coquereli
ENSCPBG00000023418	-	65	54.483	ENSPVAG00000014056	GZF1	91	54.483	Pteropus_vampyrus
ENSCPBG00000023418	-	50	55.517	ENSRNOG00000004735	Gzf1	90	55.034	Rattus_norvegicus
ENSCPBG00000023418	-	68	54.483	ENSRBIG00000028715	GZF1	89	51.887	Rhinopithecus_bieti
ENSCPBG00000023418	-	68	54.483	ENSRROG00000030533	GZF1	89	51.887	Rhinopithecus_roxellana
ENSCPBG00000023418	-	68	54.483	ENSSBOG00000018893	GZF1	70	51.887	Saimiri_boliviensis_boliviensis
ENSCPBG00000023418	-	66	50.000	ENSSHAG00000009367	GZF1	86	50.938	Sarcophilus_harrisii
ENSCPBG00000023418	-	83	46.457	ENSSFOG00015008631	gzf1	79	46.277	Scleropages_formosus
ENSCPBG00000023418	-	53	44.920	ENSSDUG00000008186	GZF1	72	49.062	Seriola_dumerili
ENSCPBG00000023418	-	62	44.359	ENSSLDG00000002382	GZF1	71	49.062	Seriola_lalandi_dorsalis
ENSCPBG00000023418	-	64	56.569	ENSSARG00000010285	GZF1	63	58.397	Sorex_araneus
ENSCPBG00000023418	-	83	42.165	ENSSPUG00000004147	GZF1	89	47.557	Sphenodon_punctatus
ENSCPBG00000023418	-	72	39.474	ENSSPAG00000011759	GZF1	78	41.250	Stegastes_partitus
ENSCPBG00000023418	-	67	52.159	ENSSSCG00000007117	GZF1	88	46.685	Sus_scrofa
ENSCPBG00000023418	-	64	84.532	ENSTGUG00000007503	GZF1	99	84.532	Taeniopygia_guttata
ENSCPBG00000023418	-	79	43.165	ENSTRUG00000006128	-	52	49.180	Takifugu_rubripes
ENSCPBG00000023418	-	90	44.474	ENSTNIG00000010722	GZF1	99	50.685	Tetraodon_nigroviridis
ENSCPBG00000023418	-	80	52.459	ENSTTRG00000011345	GZF1	90	52.459	Tursiops_truncatus
ENSCPBG00000023418	-	65	54.483	ENSUMAG00000004065	GZF1	89	54.483	Ursus_maritimus
ENSCPBG00000023418	-	63	54.483	ENSVVUG00000012086	GZF1	89	54.483	Vulpes_vulpes
ENSCPBG00000023418	-	83	48.817	ENSXETG00000004510	gzf1	87	50.779	Xenopus_tropicalis
ENSCPBG00000023418	-	56	46.231	ENSXMAG00000023249	GZF1	73	50.313	Xiphophorus_maculatus