EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000023473 (Gene tree)
Gene ID: 101942600
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 11610 bases
Position: chr3:7860358-7871967
Accession: 15763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000033573	RNA_pol_Rpc34	PF05158.12	2.1e-95	1	1
ENSCPBP00000033574	RNA_pol_Rpc34	PF05158.12	7.3e-84	1	2
ENSCPBP00000033574	RNA_pol_Rpc34	PF05158.12	7.3e-84	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000039429	POLR3F-201	1512	XM_005287467	ENSCPBP00000033573	275 (aa)	XP_005287524	UPI000388E978
ENSCPBT00000039430	POLR3F-202	1404	XM_008173930	ENSCPBP00000033574	239 (aa)	XP_008172152	UPI00046C2B56

Gene Model

Click here to download ENSCPBG00000023473's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03020	RNA polymerase	KEGG
cpic04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023473	POLR3F	100	94.545	ENSG00000132664	POLR3F	87	94.545	Homo_sapiens
ENSCPBG00000023473	POLR3F	100	87.636	ENSAPOG00000008271	polr3f	90	87.636	Acanthochromis_polyacanthus
ENSCPBG00000023473	POLR3F	100	94.909	ENSAMEG00000005222	POLR3F	87	94.909	Ailuropoda_melanoleuca
ENSCPBG00000023473	POLR3F	100	84.364	ENSACIG00000006705	polr3f	89	84.364	Amphilophus_citrinellus
ENSCPBG00000023473	POLR3F	100	88.000	ENSAOCG00000000687	polr3f	87	88.000	Amphiprion_ocellaris
ENSCPBG00000023473	POLR3F	100	87.636	ENSAPEG00000015263	polr3f	87	87.636	Amphiprion_percula
ENSCPBG00000023473	POLR3F	100	89.091	ENSATEG00000015539	polr3f	100	89.091	Anabas_testudineus
ENSCPBG00000023473	POLR3F	100	94.182	ENSAPLG00000005533	POLR3F	100	94.182	Anas_platyrhynchos
ENSCPBG00000023473	POLR3F	100	94.182	ENSACAG00000014293	POLR3F	89	94.182	Anolis_carolinensis
ENSCPBG00000023473	POLR3F	100	94.909	ENSANAG00000026726	POLR3F	87	94.909	Aotus_nancymaae
ENSCPBG00000023473	POLR3F	100	89.091	ENSACLG00000003615	polr3f	87	89.091	Astatotilapia_calliptera
ENSCPBG00000023473	POLR3F	100	90.545	ENSAMXG00000036020	polr3f	88	90.545	Astyanax_mexicanus
ENSCPBG00000023473	POLR3F	100	94.545	ENSBTAG00000008825	POLR3F	87	94.545	Bos_taurus
ENSCPBG00000023473	POLR3F	99	34.799	WBGene00021112	W09C3.4	86	34.799	Caenorhabditis_elegans
ENSCPBG00000023473	POLR3F	100	94.909	ENSCJAG00000005159	POLR3F	87	94.909	Callithrix_jacchus
ENSCPBG00000023473	POLR3F	100	94.909	ENSCAFG00000005420	POLR3F	87	94.909	Canis_familiaris
ENSCPBG00000023473	POLR3F	100	94.909	ENSCAFG00020027500	POLR3F	87	94.909	Canis_lupus_dingo
ENSCPBG00000023473	POLR3F	100	94.545	ENSCHIG00000014743	POLR3F	87	94.545	Capra_hircus
ENSCPBG00000023473	POLR3F	100	94.545	ENSTSYG00000004207	POLR3F	87	94.545	Carlito_syrichta
ENSCPBG00000023473	POLR3F	92	57.273	ENSCAPG00000008423	POLR3F	93	57.273	Cavia_aperea
ENSCPBG00000023473	POLR3F	100	93.455	ENSCPOG00000002400	POLR3F	87	93.455	Cavia_porcellus
ENSCPBG00000023473	POLR3F	100	94.979	ENSCCAG00000021800	POLR3F	85	94.979	Cebus_capucinus
ENSCPBG00000023473	POLR3F	100	94.182	ENSCATG00000019507	POLR3F	87	94.182	Cercocebus_atys
ENSCPBG00000023473	POLR3F	100	94.182	ENSCLAG00000016296	POLR3F	87	94.182	Chinchilla_lanigera
ENSCPBG00000023473	POLR3F	100	94.182	ENSCSAG00000011513	POLR3F	87	94.182	Chlorocebus_sabaeus
ENSCPBG00000023473	POLR3F	80	95.506	ENSCHOG00000013268	POLR3F	60	95.506	Choloepus_hoffmanni
ENSCPBG00000023473	POLR3F	98	65.926	ENSCING00000001212	-	85	65.926	Ciona_intestinalis
ENSCPBG00000023473	POLR3F	63	72.000	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSCPBG00000023473	POLR3F	91	94.000	ENSCANG00000037390	POLR3F	86	94.000	Colobus_angolensis_palliatus
ENSCPBG00000023473	POLR3F	100	94.545	ENSCGRG00001002032	Polr3f	87	94.545	Cricetulus_griseus_chok1gshd
ENSCPBG00000023473	POLR3F	100	94.545	ENSCGRG00000010852	Polr3f	87	94.545	Cricetulus_griseus_crigri
ENSCPBG00000023473	POLR3F	100	87.636	ENSCSEG00000001247	polr3f	87	87.636	Cynoglossus_semilaevis
ENSCPBG00000023473	POLR3F	100	87.273	ENSCVAG00000007611	polr3f	87	87.273	Cyprinodon_variegatus
ENSCPBG00000023473	POLR3F	100	89.818	ENSDARG00000012572	polr3f	88	89.818	Danio_rerio
ENSCPBG00000023473	POLR3F	100	91.636	ENSDNOG00000010719	POLR3F	87	91.636	Dasypus_novemcinctus
ENSCPBG00000023473	POLR3F	100	94.182	ENSDORG00000016352	Polr3f	87	94.182	Dipodomys_ordii
ENSCPBG00000023473	POLR3F	99	50.909	FBgn0038951	CG5380	90	50.909	Drosophila_melanogaster
ENSCPBG00000023473	POLR3F	91	54.400	ENSETEG00000015485	-	89	54.400	Echinops_telfairi
ENSCPBG00000023473	POLR3F	100	77.455	ENSEBUG00000006783	polr3f	88	77.455	Eptatretus_burgeri
ENSCPBG00000023473	POLR3F	100	94.545	ENSEASG00005002022	POLR3F	87	94.545	Equus_asinus_asinus
ENSCPBG00000023473	POLR3F	100	94.545	ENSECAG00000009920	POLR3F	87	94.545	Equus_caballus
ENSCPBG00000023473	POLR3F	77	92.000	ENSEEUG00000000184	POLR3F	67	92.000	Erinaceus_europaeus
ENSCPBG00000023473	POLR3F	100	89.818	ENSELUG00000001558	polr3f	88	89.818	Esox_lucius
ENSCPBG00000023473	POLR3F	100	94.909	ENSFCAG00000013828	POLR3F	87	94.909	Felis_catus
ENSCPBG00000023473	POLR3F	100	93.818	ENSFALG00000007623	POLR3F	100	93.818	Ficedula_albicollis
ENSCPBG00000023473	POLR3F	100	93.818	ENSFDAG00000002528	POLR3F	87	93.818	Fukomys_damarensis
ENSCPBG00000023473	POLR3F	100	85.818	ENSFHEG00000006450	polr3f	87	85.818	Fundulus_heteroclitus
ENSCPBG00000023473	POLR3F	100	94.909	ENSGALG00000008749	POLR3F	88	94.909	Gallus_gallus
ENSCPBG00000023473	POLR3F	100	86.545	ENSGAFG00000003698	polr3f	87	86.545	Gambusia_affinis
ENSCPBG00000023473	POLR3F	52	85.039	ENSGACG00000019915	polr3f	95	85.039	Gasterosteus_aculeatus
ENSCPBG00000023473	POLR3F	100	99.636	ENSGAGG00000006151	POLR3F	88	99.636	Gopherus_agassizii
ENSCPBG00000023473	POLR3F	100	94.545	ENSGGOG00000011543	POLR3F	87	94.545	Gorilla_gorilla
ENSCPBG00000023473	POLR3F	100	89.455	ENSHBUG00000013806	polr3f	87	89.455	Haplochromis_burtoni
ENSCPBG00000023473	POLR3F	100	93.818	ENSHGLG00000011867	POLR3F	87	93.818	Heterocephalus_glaber_female
ENSCPBG00000023473	POLR3F	100	93.818	ENSHGLG00100012577	POLR3F	87	93.818	Heterocephalus_glaber_male
ENSCPBG00000023473	POLR3F	100	77.455	ENSHCOG00000011751	polr3f	87	77.455	Hippocampus_comes
ENSCPBG00000023473	POLR3F	100	89.818	ENSIPUG00000013347	polr3f	88	89.818	Ictalurus_punctatus
ENSCPBG00000023473	POLR3F	100	94.909	ENSSTOG00000013588	POLR3F	87	94.909	Ictidomys_tridecemlineatus
ENSCPBG00000023473	POLR3F	100	94.182	ENSJJAG00000017513	Polr3f	87	94.182	Jaculus_jaculus
ENSCPBG00000023473	POLR3F	100	81.818	ENSKMAG00000016495	polr3f	100	81.818	Kryptolebias_marmoratus
ENSCPBG00000023473	POLR3F	84	91.810	ENSLBEG00000011998	polr3f	100	91.810	Labrus_bergylta
ENSCPBG00000023473	POLR3F	100	92.364	ENSLACG00000009371	POLR3F	88	92.364	Latimeria_chalumnae
ENSCPBG00000023473	POLR3F	100	91.273	ENSLOCG00000015701	polr3f	88	91.273	Lepisosteus_oculatus
ENSCPBG00000023473	POLR3F	100	94.182	ENSLAFG00000004929	POLR3F	87	94.182	Loxodonta_africana
ENSCPBG00000023473	POLR3F	100	94.182	ENSMFAG00000002227	POLR3F	87	94.182	Macaca_fascicularis
ENSCPBG00000023473	POLR3F	100	94.182	ENSMMUG00000004143	POLR3F	100	94.182	Macaca_mulatta
ENSCPBG00000023473	POLR3F	100	94.182	ENSMNEG00000033404	POLR3F	87	94.182	Macaca_nemestrina
ENSCPBG00000023473	POLR3F	100	94.182	ENSMLEG00000021905	POLR3F	87	94.182	Mandrillus_leucophaeus
ENSCPBG00000023473	POLR3F	100	88.000	ENSMAMG00000017975	polr3f	87	88.000	Mastacembelus_armatus
ENSCPBG00000023473	POLR3F	100	89.091	ENSMZEG00005015134	polr3f	87	89.091	Maylandia_zebra
ENSCPBG00000023473	POLR3F	100	94.545	ENSMGAG00000006691	POLR3F	88	94.545	Meleagris_gallopavo
ENSCPBG00000023473	POLR3F	100	94.909	ENSMAUG00000020176	Polr3f	87	94.909	Mesocricetus_auratus
ENSCPBG00000023473	POLR3F	100	94.182	ENSMICG00000044519	POLR3F	87	94.182	Microcebus_murinus
ENSCPBG00000023473	POLR3F	100	93.818	ENSMOCG00000018352	Polr3f	87	93.818	Microtus_ochrogaster
ENSCPBG00000023473	POLR3F	100	88.448	ENSMMOG00000018477	polr3f	93	88.448	Mola_mola
ENSCPBG00000023473	POLR3F	100	94.909	ENSMODG00000005624	POLR3F	87	94.909	Monodelphis_domestica
ENSCPBG00000023473	POLR3F	100	89.091	ENSMALG00000006685	polr3f	87	89.091	Monopterus_albus
ENSCPBG00000023473	POLR3F	100	93.091	MGP_CAROLIEiJ_G0024385	Polr3f	87	93.091	Mus_caroli
ENSCPBG00000023473	POLR3F	100	93.091	ENSMUSG00000027427	Polr3f	87	93.091	Mus_musculus
ENSCPBG00000023473	POLR3F	100	93.091	MGP_PahariEiJ_G0025829	Polr3f	87	93.091	Mus_pahari
ENSCPBG00000023473	POLR3F	100	93.091	MGP_SPRETEiJ_G0025304	Polr3f	87	93.091	Mus_spretus
ENSCPBG00000023473	POLR3F	100	70.775	ENSMPUG00000001252	-	87	70.775	Mustela_putorius_furo
ENSCPBG00000023473	POLR3F	100	94.909	ENSMLUG00000014844	POLR3F	87	94.909	Myotis_lucifugus
ENSCPBG00000023473	POLR3F	100	93.455	ENSNGAG00000010898	Polr3f	87	93.455	Nannospalax_galili
ENSCPBG00000023473	POLR3F	100	89.455	ENSNBRG00000020796	polr3f	87	89.455	Neolamprologus_brichardi
ENSCPBG00000023473	POLR3F	100	94.545	ENSNLEG00000009778	POLR3F	87	94.545	Nomascus_leucogenys
ENSCPBG00000023473	POLR3F	100	88.000	ENSMEUG00000010320	POLR3F	93	88.000	Notamacropus_eugenii
ENSCPBG00000023473	POLR3F	100	93.455	ENSOPRG00000003385	POLR3F	87	93.455	Ochotona_princeps
ENSCPBG00000023473	POLR3F	100	93.818	ENSODEG00000011521	POLR3F	87	93.818	Octodon_degus
ENSCPBG00000023473	POLR3F	100	89.091	ENSONIG00000006858	polr3f	87	89.091	Oreochromis_niloticus
ENSCPBG00000023473	POLR3F	100	94.909	ENSOANG00000001253	POLR3F	87	94.909	Ornithorhynchus_anatinus
ENSCPBG00000023473	POLR3F	100	94.182	ENSOCUG00000015067	POLR3F	87	94.182	Oryctolagus_cuniculus
ENSCPBG00000023473	POLR3F	100	86.182	ENSORLG00000022412	polr3f	87	86.182	Oryzias_latipes
ENSCPBG00000023473	POLR3F	100	86.182	ENSORLG00020021944	polr3f	87	86.182	Oryzias_latipes_hni
ENSCPBG00000023473	POLR3F	100	93.091	ENSOGAG00000002916	POLR3F	87	93.091	Otolemur_garnettii
ENSCPBG00000023473	POLR3F	100	94.545	ENSOARG00000000315	-	87	94.545	Ovis_aries
ENSCPBG00000023473	POLR3F	100	53.455	ENSOARG00000008647	-	84	53.455	Ovis_aries
ENSCPBG00000023473	POLR3F	100	94.545	ENSPPAG00000036681	POLR3F	87	94.545	Pan_paniscus
ENSCPBG00000023473	POLR3F	100	94.909	ENSPPRG00000024604	POLR3F	87	94.909	Panthera_pardus
ENSCPBG00000023473	POLR3F	100	94.909	ENSPTIG00000020292	POLR3F	87	94.909	Panthera_tigris_altaica
ENSCPBG00000023473	POLR3F	100	94.545	ENSPTRG00000013287	POLR3F	87	94.545	Pan_troglodytes
ENSCPBG00000023473	POLR3F	100	94.182	ENSPANG00000025015	POLR3F	87	94.182	Papio_anubis
ENSCPBG00000023473	POLR3F	100	89.455	ENSPKIG00000004427	polr3f	88	89.455	Paramormyrops_kingsleyae
ENSCPBG00000023473	POLR3F	100	97.455	ENSPSIG00000016613	POLR3F	100	97.455	Pelodiscus_sinensis
ENSCPBG00000023473	POLR3F	100	60.082	ENSPMGG00000018350	polr3f	84	60.082	Periophthalmus_magnuspinnatus
ENSCPBG00000023473	POLR3F	100	94.909	ENSPEMG00000006966	Polr3f	87	94.909	Peromyscus_maniculatus_bairdii
ENSCPBG00000023473	POLR3F	100	81.818	ENSPMAG00000005530	polr3f	88	81.818	Petromyzon_marinus
ENSCPBG00000023473	POLR3F	100	94.545	ENSPCIG00000000908	POLR3F	74	94.545	Phascolarctos_cinereus
ENSCPBG00000023473	POLR3F	100	86.909	ENSPFOG00000018334	polr3f	87	86.909	Poecilia_formosa
ENSCPBG00000023473	POLR3F	100	86.909	ENSPLAG00000021803	polr3f	87	86.909	Poecilia_latipinna
ENSCPBG00000023473	POLR3F	100	86.909	ENSPMEG00000013150	polr3f	87	86.909	Poecilia_mexicana
ENSCPBG00000023473	POLR3F	100	86.909	ENSPREG00000005278	polr3f	87	86.909	Poecilia_reticulata
ENSCPBG00000023473	POLR3F	100	94.545	ENSPPYG00000010737	POLR3F	87	94.545	Pongo_abelii
ENSCPBG00000023473	POLR3F	54	94.595	ENSPCAG00000004893	POLR3F	51	94.595	Procavia_capensis
ENSCPBG00000023473	POLR3F	100	94.182	ENSPCOG00000004543	POLR3F	87	94.182	Propithecus_coquereli
ENSCPBG00000023473	POLR3F	100	94.545	ENSPVAG00000000403	POLR3F	87	94.545	Pteropus_vampyrus
ENSCPBG00000023473	POLR3F	100	89.455	ENSPNYG00000016276	polr3f	87	89.455	Pundamilia_nyererei
ENSCPBG00000023473	POLR3F	100	90.545	ENSPNAG00000005164	polr3f	88	90.545	Pygocentrus_nattereri
ENSCPBG00000023473	POLR3F	100	93.455	ENSRNOG00000007548	Polr3f	74	93.455	Rattus_norvegicus
ENSCPBG00000023473	POLR3F	100	94.182	ENSRBIG00000021268	POLR3F	87	94.182	Rhinopithecus_bieti
ENSCPBG00000023473	POLR3F	100	94.182	ENSRROG00000039911	POLR3F	87	94.182	Rhinopithecus_roxellana
ENSCPBG00000023473	POLR3F	71	30.542	YNR003C	RPC34	64	30.542	Saccharomyces_cerevisiae
ENSCPBG00000023473	POLR3F	100	94.909	ENSSBOG00000018207	POLR3F	87	94.909	Saimiri_boliviensis_boliviensis
ENSCPBG00000023473	POLR3F	77	94.811	ENSSHAG00000018160	POLR3F	76	88.085	Sarcophilus_harrisii
ENSCPBG00000023473	POLR3F	100	92.364	ENSSFOG00015022433	polr3f	88	92.364	Scleropages_formosus
ENSCPBG00000023473	POLR3F	100	86.545	ENSSMAG00000021029	polr3f	87	86.545	Scophthalmus_maximus
ENSCPBG00000023473	POLR3F	100	84.064	ENSSDUG00000022435	polr3f	86	84.064	Seriola_dumerili
ENSCPBG00000023473	POLR3F	100	88.364	ENSSLDG00000012761	polr3f	87	88.364	Seriola_lalandi_dorsalis
ENSCPBG00000023473	POLR3F	100	84.364	ENSSARG00000006039	POLR3F	87	84.364	Sorex_araneus
ENSCPBG00000023473	POLR3F	100	94.909	ENSSPUG00000001873	POLR3F	88	94.909	Sphenodon_punctatus
ENSCPBG00000023473	POLR3F	100	79.636	ENSSPAG00000002092	polr3f	86	79.636	Stegastes_partitus
ENSCPBG00000023473	POLR3F	100	94.545	ENSSSCG00000007095	POLR3F	100	95.690	Sus_scrofa
ENSCPBG00000023473	POLR3F	100	93.818	ENSTGUG00000005839	POLR3F	88	93.818	Taeniopygia_guttata
ENSCPBG00000023473	POLR3F	100	87.273	ENSTRUG00000012101	polr3f	87	87.273	Takifugu_rubripes
ENSCPBG00000023473	POLR3F	100	85.091	ENSTNIG00000006456	polr3f	87	85.091	Tetraodon_nigroviridis
ENSCPBG00000023473	POLR3F	83	94.118	ENSTBEG00000007921	POLR3F	87	75.636	Tupaia_belangeri
ENSCPBG00000023473	POLR3F	100	95.273	ENSTTRG00000002580	POLR3F	87	95.273	Tursiops_truncatus
ENSCPBG00000023473	POLR3F	60	94.578	ENSUAMG00000024166	POLR3F	100	94.578	Ursus_americanus
ENSCPBG00000023473	POLR3F	100	94.545	ENSUMAG00000024944	POLR3F	87	94.545	Ursus_maritimus
ENSCPBG00000023473	POLR3F	100	93.818	ENSVPAG00000009063	POLR3F	87	93.818	Vicugna_pacos
ENSCPBG00000023473	POLR3F	100	94.909	ENSVVUG00000012925	POLR3F	87	94.909	Vulpes_vulpes
ENSCPBG00000023473	POLR3F	100	91.636	ENSXETG00000024898	polr3f	88	91.636	Xenopus_tropicalis
ENSCPBG00000023473	POLR3F	100	87.273	ENSXCOG00000010301	polr3f	100	87.273	Xiphophorus_couchianus
ENSCPBG00000023473	POLR3F	100	87.273	ENSXMAG00000004604	polr3f	87	87.273	Xiphophorus_maculatus