EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000023474 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 25496 bases
Position: chrKK082930.1:892733-918228
Accession: 18411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000033575	zf-C2H2	PF00096.26	2.3e-23	1	4
ENSCPBP00000033575	zf-C2H2	PF00096.26	2.3e-23	2	4
ENSCPBP00000033575	zf-C2H2	PF00096.26	2.3e-23	3	4
ENSCPBP00000033575	zf-C2H2	PF00096.26	2.3e-23	4	4
ENSCPBP00000033577	zf-C2H2	PF00096.26	2.7e-23	1	4
ENSCPBP00000033577	zf-C2H2	PF00096.26	2.7e-23	2	4
ENSCPBP00000033577	zf-C2H2	PF00096.26	2.7e-23	3	4
ENSCPBP00000033577	zf-C2H2	PF00096.26	2.7e-23	4	4
ENSCPBP00000033575	zf-met	PF12874.7	9.6e-05	1	1
ENSCPBP00000033577	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000039433	SNAI3-202	1489	-	ENSCPBP00000033577	293 (aa)	XP_023961281	UPI000388B202
ENSCPBT00000039431	SNAI3-201	2337	-	ENSCPBP00000033575	281 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000023474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000023474	SNAI3	99	52.703	ENSCPBG00000020255	SNAI2	99	52.703
ENSCPBG00000023474	SNAI3	51	53.846	ENSCPBG00000018899	SCRT1	51	53.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023474	SNAI3	99	63.245	ENSG00000185669	SNAI3	99	64.548	Homo_sapiens
ENSCPBG00000023474	SNAI3	99	51.701	ENSG00000019549	SNAI2	99	51.701	Homo_sapiens
ENSCPBG00000023474	SNAI3	99	52.189	ENSAMEG00000009606	SNAI2	99	52.189	Ailuropoda_melanoleuca
ENSCPBG00000023474	SNAI3	99	62.333	ENSANAG00000032748	SNAI3	99	62.333	Aotus_nancymaae
ENSCPBG00000023474	SNAI3	99	51.701	ENSANAG00000021163	SNAI2	99	51.701	Aotus_nancymaae
ENSCPBG00000023474	SNAI3	99	60.943	ENSBTAG00000017528	SNAI3	99	60.943	Bos_taurus
ENSCPBG00000023474	SNAI3	99	51.701	ENSBTAG00000013227	SNAI2	99	51.701	Bos_taurus
ENSCPBG00000023474	SNAI3	99	51.701	ENSCJAG00000013499	SNAI2	99	51.701	Callithrix_jacchus
ENSCPBG00000023474	SNAI3	99	53.041	ENSCAFG00000006638	SNAI2	99	53.535	Canis_familiaris
ENSCPBG00000023474	SNAI3	99	56.026	ENSCAFG00000029458	SNAI3	99	59.333	Canis_familiaris
ENSCPBG00000023474	SNAI3	99	53.041	ENSCAFG00020015384	SNAI2	99	53.535	Canis_lupus_dingo
ENSCPBG00000023474	SNAI3	99	56.352	ENSCAFG00020004719	SNAI3	99	59.667	Canis_lupus_dingo
ENSCPBG00000023474	SNAI3	99	52.041	ENSCHIG00000024410	SNAI2	99	52.041	Capra_hircus
ENSCPBG00000023474	SNAI3	99	60.943	ENSCHIG00000018087	SNAI3	99	60.797	Capra_hircus
ENSCPBG00000023474	SNAI3	51	82.394	ENSTSYG00000030892	SNAI2	53	82.394	Carlito_syrichta
ENSCPBG00000023474	SNAI3	94	58.736	ENSTSYG00000025594	SNAI3	90	59.701	Carlito_syrichta
ENSCPBG00000023474	SNAI3	51	80.986	ENSCAPG00000013078	SNAI2	64	80.986	Cavia_aperea
ENSCPBG00000023474	SNAI3	99	51.701	ENSCCAG00000024100	SNAI2	99	51.701	Cebus_capucinus
ENSCPBG00000023474	SNAI3	99	51.701	ENSCATG00000028656	SNAI2	99	51.701	Cercocebus_atys
ENSCPBG00000023474	SNAI3	99	63.880	ENSCATG00000031714	SNAI3	99	63.880	Cercocebus_atys
ENSCPBG00000023474	SNAI3	99	52.189	ENSCLAG00000011797	SNAI2	99	52.189	Chinchilla_lanigera
ENSCPBG00000023474	SNAI3	99	51.701	ENSCSAG00000014787	SNAI2	99	51.701	Chlorocebus_sabaeus
ENSCPBG00000023474	SNAI3	94	63.971	ENSCSAG00000003047	SNAI3	91	63.971	Chlorocebus_sabaeus
ENSCPBG00000023474	SNAI3	99	51.701	ENSCANG00000029656	SNAI2	99	51.701	Colobus_angolensis_palliatus
ENSCPBG00000023474	SNAI3	94	64.815	ENSCANG00000031124	SNAI3	81	64.815	Colobus_angolensis_palliatus
ENSCPBG00000023474	SNAI3	99	53.041	ENSCGRG00001013674	Snai2	99	52.189	Cricetulus_griseus_chok1gshd
ENSCPBG00000023474	SNAI3	99	56.902	ENSCGRG00001011389	Snai3	99	58.923	Cricetulus_griseus_chok1gshd
ENSCPBG00000023474	SNAI3	99	56.902	ENSCGRG00000014932	Snai3	99	58.923	Cricetulus_griseus_crigri
ENSCPBG00000023474	SNAI3	99	53.041	ENSCGRG00000012119	Snai2	99	52.189	Cricetulus_griseus_crigri
ENSCPBG00000023474	SNAI3	80	42.500	ENSDNOG00000035204	-	100	44.583	Dasypus_novemcinctus
ENSCPBG00000023474	SNAI3	99	51.342	ENSDORG00000029620	Snai2	99	52.041	Dipodomys_ordii
ENSCPBG00000023474	SNAI3	95	57.092	ENSEASG00005000614	SNAI3	88	61.765	Equus_asinus_asinus
ENSCPBG00000023474	SNAI3	100	62.207	ENSECAG00000012131	SNAI3	100	62.207	Equus_caballus
ENSCPBG00000023474	SNAI3	99	53.199	ENSEEUG00000000841	SNAI3	99	53.199	Erinaceus_europaeus
ENSCPBG00000023474	SNAI3	100	53.922	ENSELUG00000018742	-	100	53.922	Esox_lucius
ENSCPBG00000023474	SNAI3	99	50.680	ENSELUG00000021795	SNAI2	79	51.525	Esox_lucius
ENSCPBG00000023474	SNAI3	99	57.966	ENSFCAG00000043885	SNAI3	99	57.966	Felis_catus
ENSCPBG00000023474	SNAI3	99	52.189	ENSFDAG00000016958	SNAI2	99	52.189	Fukomys_damarensis
ENSCPBG00000023474	SNAI3	99	52.703	ENSGAGG00000000426	SNAI2	99	52.703	Gopherus_agassizii
ENSCPBG00000023474	SNAI3	100	94.662	ENSGAGG00000023571	SNAI3	100	94.662	Gopherus_agassizii
ENSCPBG00000023474	SNAI3	99	51.701	ENSGGOG00000000959	SNAI2	99	51.701	Gorilla_gorilla
ENSCPBG00000023474	SNAI3	99	59.609	ENSGGOG00000012559	SNAI3	99	62.583	Gorilla_gorilla
ENSCPBG00000023474	SNAI3	99	50.667	ENSHCOG00000019435	SNAI2	99	52.824	Hippocampus_comes
ENSCPBG00000023474	SNAI3	99	48.852	ENSIPUG00000000131	snai2	99	50.842	Ictalurus_punctatus
ENSCPBG00000023474	SNAI3	99	52.189	ENSSTOG00000028743	SNAI2	99	52.189	Ictidomys_tridecemlineatus
ENSCPBG00000023474	SNAI3	99	59.667	ENSJJAG00000019934	Snai3	99	59.667	Jaculus_jaculus
ENSCPBG00000023474	SNAI3	51	86.014	ENSLOCG00000004887	SNAI3	88	86.014	Lepisosteus_oculatus
ENSCPBG00000023474	SNAI3	99	52.542	ENSLOCG00000005992	SNAI2	99	52.542	Lepisosteus_oculatus
ENSCPBG00000023474	SNAI3	99	62.081	ENSLAFG00000005117	SNAI3	99	62.081	Loxodonta_africana
ENSCPBG00000023474	SNAI3	99	53.199	ENSLAFG00000009299	SNAI2	99	53.535	Loxodonta_africana
ENSCPBG00000023474	SNAI3	99	64.548	ENSMFAG00000032064	SNAI3	99	64.548	Macaca_fascicularis
ENSCPBG00000023474	SNAI3	99	51.701	ENSMFAG00000046061	SNAI2	99	51.701	Macaca_fascicularis
ENSCPBG00000023474	SNAI3	99	64.548	ENSMMUG00000008716	SNAI3	99	64.548	Macaca_mulatta
ENSCPBG00000023474	SNAI3	99	51.701	ENSMMUG00000016195	SNAI2	99	51.701	Macaca_mulatta
ENSCPBG00000023474	SNAI3	99	64.548	ENSMNEG00000045515	SNAI3	99	64.548	Macaca_nemestrina
ENSCPBG00000023474	SNAI3	99	51.701	ENSMNEG00000034216	SNAI2	99	51.701	Macaca_nemestrina
ENSCPBG00000023474	SNAI3	99	51.701	ENSMLEG00000034407	SNAI2	99	51.701	Mandrillus_leucophaeus
ENSCPBG00000023474	SNAI3	94	63.971	ENSMLEG00000033191	SNAI3	91	63.971	Mandrillus_leucophaeus
ENSCPBG00000023474	SNAI3	99	51.827	ENSMAUG00000008119	Snai2	99	52.159	Mesocricetus_auratus
ENSCPBG00000023474	SNAI3	99	59.247	ENSMAUG00000001685	Snai3	99	59.247	Mesocricetus_auratus
ENSCPBG00000023474	SNAI3	99	58.725	ENSMOCG00000003536	Snai3	99	58.725	Microtus_ochrogaster
ENSCPBG00000023474	SNAI3	99	52.703	ENSMOCG00000006622	Snai2	99	52.189	Microtus_ochrogaster
ENSCPBG00000023474	SNAI3	99	52.721	ENSMODG00000010173	SNAI2	99	52.721	Monodelphis_domestica
ENSCPBG00000023474	SNAI3	99	52.862	MGP_CAROLIEiJ_G0020483	Snai2	99	52.862	Mus_caroli
ENSCPBG00000023474	SNAI3	99	55.892	MGP_CAROLIEiJ_G0031662	Snai3	99	55.892	Mus_caroli
ENSCPBG00000023474	SNAI3	99	56.902	ENSMUSG00000006587	Snai3	99	56.902	Mus_musculus
ENSCPBG00000023474	SNAI3	99	52.525	ENSMUSG00000022676	Snai2	99	52.525	Mus_musculus
ENSCPBG00000023474	SNAI3	99	58.000	MGP_PahariEiJ_G0023260	Snai3	99	58.000	Mus_pahari
ENSCPBG00000023474	SNAI3	99	52.862	MGP_PahariEiJ_G0016188	Snai2	99	52.862	Mus_pahari
ENSCPBG00000023474	SNAI3	99	56.902	MGP_SPRETEiJ_G0032780	Snai3	99	56.902	Mus_spretus
ENSCPBG00000023474	SNAI3	99	52.525	MGP_SPRETEiJ_G0021379	Snai2	99	52.525	Mus_spretus
ENSCPBG00000023474	SNAI3	99	59.596	ENSMPUG00000008104	SNAI3	99	59.596	Mustela_putorius_furo
ENSCPBG00000023474	SNAI3	99	52.189	ENSMPUG00000010793	SNAI2	99	52.189	Mustela_putorius_furo
ENSCPBG00000023474	SNAI3	99	53.041	ENSMLUG00000001086	SNAI2	99	52.475	Myotis_lucifugus
ENSCPBG00000023474	SNAI3	99	58.983	ENSNGAG00000023039	Snai3	99	58.983	Nannospalax_galili
ENSCPBG00000023474	SNAI3	99	60.912	ENSNLEG00000000595	SNAI3	99	64.883	Nomascus_leucogenys
ENSCPBG00000023474	SNAI3	99	52.041	ENSNLEG00000013421	SNAI2	99	52.041	Nomascus_leucogenys
ENSCPBG00000023474	SNAI3	98	53.952	ENSMEUG00000009510	SNAI2	100	53.952	Notamacropus_eugenii
ENSCPBG00000023474	SNAI3	99	51.701	ENSOANG00000007267	SNAI2	99	52.381	Ornithorhynchus_anatinus
ENSCPBG00000023474	SNAI3	99	59.532	ENSOGAG00000000419	SNAI3	99	60.133	Otolemur_garnettii
ENSCPBG00000023474	SNAI3	94	44.245	ENSOARG00000013069	-	99	44.245	Ovis_aries
ENSCPBG00000023474	SNAI3	99	52.041	ENSOARG00000013030	SNAI2	99	52.041	Ovis_aries
ENSCPBG00000023474	SNAI3	99	51.701	ENSPPAG00000015662	SNAI2	99	51.701	Pan_paniscus
ENSCPBG00000023474	SNAI3	99	59.935	ENSPPAG00000043301	SNAI3	99	64.214	Pan_paniscus
ENSCPBG00000023474	SNAI3	99	51.701	ENSPPRG00000012562	-	99	51.701	Panthera_pardus
ENSCPBG00000023474	SNAI3	99	57.288	ENSPPRG00000008511	SNAI3	99	57.288	Panthera_pardus
ENSCPBG00000023474	SNAI3	99	60.586	ENSPTRG00000008460	SNAI3	99	64.214	Pan_troglodytes
ENSCPBG00000023474	SNAI3	99	51.701	ENSPTRG00000020235	SNAI2	99	51.701	Pan_troglodytes
ENSCPBG00000023474	SNAI3	99	51.701	ENSPANG00000017540	SNAI2	99	51.701	Papio_anubis
ENSCPBG00000023474	SNAI3	99	64.214	ENSPANG00000000509	SNAI3	99	64.214	Papio_anubis
ENSCPBG00000023474	SNAI3	100	51.140	ENSPKIG00000007872	SNAI3	100	51.140	Paramormyrops_kingsleyae
ENSCPBG00000023474	SNAI3	99	50.853	ENSPKIG00000002254	SNAI2	99	52.218	Paramormyrops_kingsleyae
ENSCPBG00000023474	SNAI3	81	84.279	ENSPSIG00000004262	SNAI3	91	84.279	Pelodiscus_sinensis
ENSCPBG00000023474	SNAI3	99	52.703	ENSPSIG00000016395	SNAI2	99	52.703	Pelodiscus_sinensis
ENSCPBG00000023474	SNAI3	99	52.560	ENSPMGG00000013179	SNAI2	99	53.667	Periophthalmus_magnuspinnatus
ENSCPBG00000023474	SNAI3	99	53.041	ENSPEMG00000011739	Snai2	99	52.525	Peromyscus_maniculatus_bairdii
ENSCPBG00000023474	SNAI3	99	52.381	ENSPCIG00000025156	SNAI2	99	52.381	Phascolarctos_cinereus
ENSCPBG00000023474	SNAI3	59	72.619	ENSPREG00000008528	SNAI2	62	72.619	Poecilia_reticulata
ENSCPBG00000023474	SNAI3	99	51.701	ENSPPYG00000018578	SNAI2	99	51.701	Pongo_abelii
ENSCPBG00000023474	SNAI3	99	63.576	ENSPPYG00000007643	SNAI3	99	63.455	Pongo_abelii
ENSCPBG00000023474	SNAI3	99	52.189	ENSPCOG00000015656	SNAI2	99	52.189	Propithecus_coquereli
ENSCPBG00000023474	SNAI3	99	52.041	ENSPVAG00000009457	SNAI2	99	52.041	Pteropus_vampyrus
ENSCPBG00000023474	SNAI3	99	59.532	ENSRNOG00000013586	Snai3	99	59.532	Rattus_norvegicus
ENSCPBG00000023474	SNAI3	99	51.701	ENSRBIG00000041133	SNAI2	99	51.701	Rhinopithecus_bieti
ENSCPBG00000023474	SNAI3	99	64.000	ENSRBIG00000025770	SNAI3	99	64.000	Rhinopithecus_bieti
ENSCPBG00000023474	SNAI3	99	63.333	ENSRROG00000032757	SNAI3	99	63.333	Rhinopithecus_roxellana
ENSCPBG00000023474	SNAI3	99	51.701	ENSRROG00000032273	SNAI2	99	51.701	Rhinopithecus_roxellana
ENSCPBG00000023474	SNAI3	99	51.701	ENSSBOG00000035774	SNAI2	99	51.701	Saimiri_boliviensis_boliviensis
ENSCPBG00000023474	SNAI3	99	52.381	ENSSHAG00000004205	SNAI2	99	52.381	Sarcophilus_harrisii
ENSCPBG00000023474	SNAI3	99	52.381	ENSSFOG00015018025	SNAI2	99	53.618	Scleropages_formosus
ENSCPBG00000023474	SNAI3	99	49.355	ENSSFOG00015016115	snai3	93	49.682	Scleropages_formosus
ENSCPBG00000023474	SNAI3	99	52.027	ENSSPUG00000005427	-	99	51.155	Sphenodon_punctatus
ENSCPBG00000023474	SNAI3	99	52.365	ENSSSCG00000039568	SNAI2	99	51.466	Sus_scrofa
ENSCPBG00000023474	SNAI3	99	59.933	ENSTTRG00000006262	SNAI3	99	59.933	Tursiops_truncatus
ENSCPBG00000023474	SNAI3	51	82.394	ENSUAMG00000014942	SNAI2	62	82.394	Ursus_americanus
ENSCPBG00000023474	SNAI3	99	64.430	ENSUAMG00000020030	SNAI3	99	64.430	Ursus_americanus
ENSCPBG00000023474	SNAI3	51	82.394	ENSUMAG00000006525	SNAI2	54	82.394	Ursus_maritimus
ENSCPBG00000023474	SNAI3	99	52.703	ENSVVUG00000017625	SNAI2	99	53.199	Vulpes_vulpes
ENSCPBG00000023474	SNAI3	99	57.003	ENSVVUG00000003233	SNAI3	99	59.333	Vulpes_vulpes
ENSCPBG00000023474	SNAI3	99	52.862	ENSXETG00000024006	snai2	99	52.862	Xenopus_tropicalis