EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000023763 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 17009 bases
Position: chrKK088199.1:7469744-7486752
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000034013	KH_1	PF00013.29	4.8e-07	1	1
ENSCPBP00000034013	zf-CCHC	PF00098.23	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000039907	SF1-201	3649	-	ENSCPBP00000034013	763 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000023763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023763	SF1	50	83.756	ENSAPOG00000012341	sf1	62	81.628	Acanthochromis_polyacanthus
ENSCPBG00000023763	SF1	66	85.907	ENSAMEG00000017828	SF1	81	86.486	Ailuropoda_melanoleuca
ENSCPBG00000023763	SF1	50	84.010	ENSAOCG00000010934	sf1	62	81.860	Amphiprion_ocellaris
ENSCPBG00000023763	SF1	50	84.010	ENSAPEG00000009498	sf1	62	81.860	Amphiprion_percula
ENSCPBG00000023763	SF1	68	66.353	ENSATEG00000001894	sf1	63	81.713	Anabas_testudineus
ENSCPBG00000023763	SF1	66	77.043	ENSANAG00000022607	-	88	81.918	Aotus_nancymaae
ENSCPBG00000023763	SF1	66	85.328	ENSANAG00000026664	-	96	88.480	Aotus_nancymaae
ENSCPBG00000023763	SF1	66	85.135	ENSBTAG00000001035	SF1	81	86.486	Bos_taurus
ENSCPBG00000023763	SF1	66	85.300	ENSCJAG00000002780	SF1	81	86.486	Callithrix_jacchus
ENSCPBG00000023763	SF1	66	85.135	ENSCAFG00000014239	SF1	81	86.486	Canis_familiaris
ENSCPBG00000023763	SF1	66	85.135	ENSCAFG00020014381	SF1	81	86.486	Canis_lupus_dingo
ENSCPBG00000023763	SF1	66	85.300	ENSCHIG00000025867	SF1	94	86.654	Capra_hircus
ENSCPBG00000023763	SF1	53	77.641	ENSTSYG00000033618	SF1	82	98.925	Carlito_syrichta
ENSCPBG00000023763	SF1	52	90.172	ENSCAPG00000010762	SF1	76	90.071	Cavia_aperea
ENSCPBG00000023763	SF1	66	85.465	ENSCPOG00000012290	SF1	96	86.822	Cavia_porcellus
ENSCPBG00000023763	SF1	66	85.300	ENSCCAG00000037881	SF1	96	88.480	Cebus_capucinus
ENSCPBG00000023763	SF1	66	77.756	ENSCCAG00000023781	-	88	78.540	Cebus_capucinus
ENSCPBG00000023763	SF1	66	85.135	ENSCATG00000011564	SF1	88	92.683	Cercocebus_atys
ENSCPBG00000023763	SF1	66	85.300	ENSCSAG00000007258	SF1	94	86.654	Chlorocebus_sabaeus
ENSCPBG00000023763	SF1	50	84.062	ENSCHOG00000006008	SF1	76	82.716	Choloepus_hoffmanni
ENSCPBG00000023763	SF1	65	54.297	ENSCSAVG00000009055	-	68	58.696	Ciona_savignyi
ENSCPBG00000023763	SF1	66	85.135	ENSCANG00000042201	SF1	88	92.683	Colobus_angolensis_palliatus
ENSCPBG00000023763	SF1	66	84.942	ENSCGRG00001003677	Sf1	81	86.293	Cricetulus_griseus_chok1gshd
ENSCPBG00000023763	SF1	66	85.078	ENSCGRG00000001708	Sf1	95	86.434	Cricetulus_griseus_crigri
ENSCPBG00000023763	SF1	72	64.928	ENSCSEG00000014375	sf1	60	80.046	Cynoglossus_semilaevis
ENSCPBG00000023763	SF1	53	78.199	ENSCVAG00000001670	sf1	66	83.133	Cyprinodon_variegatus
ENSCPBG00000023763	SF1	50	88.021	ENSDARG00000008188	sf1	73	85.952	Danio_rerio
ENSCPBG00000023763	SF1	66	85.687	ENSDNOG00000001282	SF1	94	87.041	Dasypus_novemcinctus
ENSCPBG00000023763	SF1	66	85.135	ENSDORG00000016334	Sf1	81	86.486	Dipodomys_ordii
ENSCPBG00000023763	SF1	66	78.723	ENSETEG00000012830	SF1	72	79.264	Echinops_telfairi
ENSCPBG00000023763	SF1	66	84.913	ENSEASG00005018272	SF1	94	86.267	Equus_asinus_asinus
ENSCPBG00000023763	SF1	66	85.106	ENSECAG00000024544	SF1	94	86.460	Equus_caballus
ENSCPBG00000023763	SF1	52	79.805	ENSELUG00000013225	sf1	57	79.405	Esox_lucius
ENSCPBG00000023763	SF1	66	85.300	ENSFCAG00000012231	SF1	81	86.486	Felis_catus
ENSCPBG00000023763	SF1	52	89.926	ENSFDAG00000009833	SF1	76	89.835	Fukomys_damarensis
ENSCPBG00000023763	SF1	52	79.268	ENSFHEG00000022656	sf1	63	81.352	Fundulus_heteroclitus
ENSCPBG00000023763	SF1	98	91.455	ENSGAGG00000021691	SF1	100	91.455	Gopherus_agassizii
ENSCPBG00000023763	SF1	66	85.135	ENSHGLG00000009541	SF1	81	86.486	Heterocephalus_glaber_female
ENSCPBG00000023763	SF1	56	83.645	ENSHGLG00100008076	-	86	83.924	Heterocephalus_glaber_male
ENSCPBG00000023763	SF1	58	78.112	ENSHGLG00100008255	-	96	75.200	Heterocephalus_glaber_male
ENSCPBG00000023763	SF1	57	86.130	ENSHGLG00100013879	-	80	88.785	Heterocephalus_glaber_male
ENSCPBG00000023763	SF1	54	76.267	ENSHCOG00000011388	sf1	62	79.059	Hippocampus_comes
ENSCPBG00000023763	SF1	59	78.431	ENSSTOG00000024353	-	76	76.147	Ictidomys_tridecemlineatus
ENSCPBG00000023763	SF1	66	85.106	ENSSTOG00000009790	-	82	86.460	Ictidomys_tridecemlineatus
ENSCPBG00000023763	SF1	66	85.328	ENSJJAG00000011788	Sf1	81	86.680	Jaculus_jaculus
ENSCPBG00000023763	SF1	51	83.582	ENSKMAG00000005854	sf1	64	83.294	Kryptolebias_marmoratus
ENSCPBG00000023763	SF1	57	75.223	ENSLBEG00000019836	sf1	52	85.841	Labrus_bergylta
ENSCPBG00000023763	SF1	66	84.942	ENSLAFG00000007201	SF1	80	86.293	Loxodonta_africana
ENSCPBG00000023763	SF1	66	85.135	ENSMFAG00000033122	SF1	88	92.683	Macaca_fascicularis
ENSCPBG00000023763	SF1	66	85.300	ENSMMUG00000022606	SF1	99	90.394	Macaca_mulatta
ENSCPBG00000023763	SF1	66	85.135	ENSMNEG00000037901	SF1	88	92.683	Macaca_nemestrina
ENSCPBG00000023763	SF1	67	83.932	ENSMLEG00000040706	SF1	90	92.000	Mandrillus_leucophaeus
ENSCPBG00000023763	SF1	68	64.338	ENSMAMG00000001780	sf1	63	80.920	Mastacembelus_armatus
ENSCPBG00000023763	SF1	66	84.942	ENSMAUG00000014064	Sf1	81	86.293	Mesocricetus_auratus
ENSCPBG00000023763	SF1	66	85.300	ENSMICG00000001202	SF1	93	89.673	Microcebus_murinus
ENSCPBG00000023763	SF1	66	85.135	ENSMOCG00000022038	Sf1	81	86.486	Microtus_ochrogaster
ENSCPBG00000023763	SF1	52	90.465	ENSMODG00000029407	SF1	92	89.858	Monodelphis_domestica
ENSCPBG00000023763	SF1	66	85.106	MGP_CAROLIEiJ_G0022607	Sf1	100	99.251	Mus_caroli
ENSCPBG00000023763	SF1	66	85.106	ENSMUSG00000024949	Sf1	100	99.251	Mus_musculus
ENSCPBG00000023763	SF1	66	85.106	MGP_PahariEiJ_G0014101	Sf1	100	99.251	Mus_pahari
ENSCPBG00000023763	SF1	66	85.106	MGP_SPRETEiJ_G0023518	Sf1	100	99.251	Mus_spretus
ENSCPBG00000023763	SF1	66	85.328	ENSMPUG00000012684	SF1	81	86.680	Mustela_putorius_furo
ENSCPBG00000023763	SF1	57	86.577	ENSMLUG00000029800	-	76	85.811	Myotis_lucifugus
ENSCPBG00000023763	SF1	66	84.749	ENSMLUG00000015217	-	81	86.486	Myotis_lucifugus
ENSCPBG00000023763	SF1	66	85.328	ENSNGAG00000005550	Sf1	81	86.680	Nannospalax_galili
ENSCPBG00000023763	SF1	66	84.971	ENSNLEG00000005236	-	88	92.683	Nomascus_leucogenys
ENSCPBG00000023763	SF1	65	85.658	ENSMEUG00000013424	SF1	96	88.605	Notamacropus_eugenii
ENSCPBG00000023763	SF1	60	84.355	ENSOPRG00000005008	SF1	99	83.811	Ochotona_princeps
ENSCPBG00000023763	SF1	58	86.871	ENSODEG00000006102	-	79	80.000	Octodon_degus
ENSCPBG00000023763	SF1	50	83.544	ENSOANG00000002909	SF1	96	82.732	Ornithorhynchus_anatinus
ENSCPBG00000023763	SF1	66	85.135	ENSOCUG00000026486	SF1	82	86.486	Oryctolagus_cuniculus
ENSCPBG00000023763	SF1	50	82.474	ENSORLG00000011853	sf1	62	79.206	Oryzias_latipes
ENSCPBG00000023763	SF1	50	82.474	ENSORLG00020011834	sf1	62	79.206	Oryzias_latipes_hni
ENSCPBG00000023763	SF1	52	80.988	ENSOMEG00000005210	sf1	63	81.075	Oryzias_melastigma
ENSCPBG00000023763	SF1	66	85.135	ENSOGAG00000016196	SF1	81	86.486	Otolemur_garnettii
ENSCPBG00000023763	SF1	58	89.278	ENSOARG00000009166	SF1	80	89.231	Ovis_aries
ENSCPBG00000023763	SF1	66	85.185	ENSPPAG00000002799	-	97	88.480	Pan_paniscus
ENSCPBG00000023763	SF1	74	77.241	ENSPPRG00000013566	SF1	82	86.454	Panthera_pardus
ENSCPBG00000023763	SF1	52	90.931	ENSPTIG00000016141	SF1	76	89.858	Panthera_tigris_altaica
ENSCPBG00000023763	SF1	66	85.300	ENSPTRG00000003846	SF1	98	89.737	Pan_troglodytes
ENSCPBG00000023763	SF1	66	85.300	ENSPANG00000020754	SF1	88	92.683	Papio_anubis
ENSCPBG00000023763	SF1	52	98.504	ENSPSIG00000003610	SF1	81	98.504	Pelodiscus_sinensis
ENSCPBG00000023763	SF1	66	84.942	ENSPEMG00000010463	Sf1	81	86.293	Peromyscus_maniculatus_bairdii
ENSCPBG00000023763	SF1	66	85.687	ENSPCIG00000018173	SF1	82	88.100	Phascolarctos_cinereus
ENSCPBG00000023763	SF1	66	85.356	ENSPPYG00000003098	-	98	86.705	Pongo_abelii
ENSCPBG00000023763	SF1	67	84.512	ENSPCAG00000013631	SF1	81	83.549	Procavia_capensis
ENSCPBG00000023763	SF1	66	85.135	ENSPCOG00000027546	SF1	93	89.673	Propithecus_coquereli
ENSCPBG00000023763	SF1	67	85.277	ENSPVAG00000016938	SF1	78	86.756	Pteropus_vampyrus
ENSCPBG00000023763	SF1	58	77.181	ENSPNAG00000013072	sf1	62	86.331	Pygocentrus_nattereri
ENSCPBG00000023763	SF1	66	84.942	ENSRNOG00000021085	Sf1	89	84.633	Rattus_norvegicus
ENSCPBG00000023763	SF1	59	89.301	ENSRBIG00000042818	SF1	88	92.683	Rhinopithecus_bieti
ENSCPBG00000023763	SF1	67	84.586	ENSRROG00000045655	SF1	91	92.000	Rhinopithecus_roxellana
ENSCPBG00000023763	SF1	73	64.261	ENSSBOG00000022267	-	97	73.645	Saimiri_boliviensis_boliviensis
ENSCPBG00000023763	SF1	53	83.212	ENSSFOG00015021978	sf1	61	83.294	Scleropages_formosus
ENSCPBG00000023763	SF1	73	65.225	ENSSMAG00000007549	sf1	65	79.954	Scophthalmus_maximus
ENSCPBG00000023763	SF1	51	79.302	ENSSDUG00000003903	sf1	64	82.588	Seriola_dumerili
ENSCPBG00000023763	SF1	51	79.302	ENSSLDG00000013075	sf1	62	82.588	Seriola_lalandi_dorsalis
ENSCPBG00000023763	SF1	66	78.682	ENSSARG00000008180	SF1	100	81.431	Sorex_araneus
ENSCPBG00000023763	SF1	75	88.087	ENSSPUG00000012907	SF1	100	89.430	Sphenodon_punctatus
ENSCPBG00000023763	SF1	50	83.756	ENSSPAG00000019060	sf1	62	81.860	Stegastes_partitus
ENSCPBG00000023763	SF1	66	85.300	ENSSSCG00000013021	SF1	94	86.654	Sus_scrofa
ENSCPBG00000023763	SF1	66	63.238	ENSTNIG00000004820	sf1	81	71.628	Tetraodon_nigroviridis
ENSCPBG00000023763	SF1	59	82.751	ENSTBEG00000013133	SF1	66	82.599	Tupaia_belangeri
ENSCPBG00000023763	SF1	66	80.814	ENSTTRG00000008857	SF1	96	82.171	Tursiops_truncatus
ENSCPBG00000023763	SF1	52	82.152	ENSUAMG00000011977	SF1	78	84.236	Ursus_americanus
ENSCPBG00000023763	SF1	59	91.574	ENSUMAG00000007268	SF1	87	89.231	Ursus_maritimus
ENSCPBG00000023763	SF1	66	85.300	ENSVVUG00000028585	SF1	94	86.654	Vulpes_vulpes
ENSCPBG00000023763	SF1	66	72.467	ENSXETG00000008434	sf1	70	83.981	Xenopus_tropicalis