EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000023866 (Gene tree)
Gene ID: 101942796
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 8148 bases
Position: chrKK088216.1:744217-752364
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000034175	TRM	PF02005.16	7.9e-143	1	1
ENSCPBP00000034170	TRM	PF02005.16	8e-143	1	1
ENSCPBP00000034173	TRM	PF02005.16	4e-138	1	1
ENSCPBP00000034175	Met_10	PF02475.16	7e-06	1	1
ENSCPBP00000034170	Met_10	PF02475.16	7.1e-06	1	1
ENSCPBP00000034173	Met_10	PF02475.16	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000040094	TRMT1-201	2201	-	ENSCPBP00000034170	667 (aa)	-	-
ENSCPBT00000040100	TRMT1-203	2071	-	ENSCPBP00000034175	663 (aa)	XP_005310700	UPI0003889E34
ENSCPBT00000040097	TRMT1-202	2278	-	ENSCPBP00000034173	694 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000023866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000023866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000023866	TRMT1	87	70.289	ENSG00000104907	TRMT1	99	78.947	Homo_sapiens
ENSCPBG00000023866	TRMT1	87	69.631	ENSAMEG00000012598	TRMT1	88	69.477	Ailuropoda_melanoleuca
ENSCPBG00000023866	TRMT1	84	62.811	ENSACIG00000018680	trmt1	87	62.807	Amphilophus_citrinellus
ENSCPBG00000023866	TRMT1	85	70.922	ENSAOCG00000006781	trmt1	85	70.745	Amphiprion_ocellaris
ENSCPBG00000023866	TRMT1	85	70.922	ENSAPEG00000007712	trmt1	85	70.745	Amphiprion_percula
ENSCPBG00000023866	TRMT1	86	71.103	ENSATEG00000001872	trmt1	85	70.928	Anabas_testudineus
ENSCPBG00000023866	TRMT1	88	76.570	ENSACAG00000003825	TRMT1	95	75.639	Anolis_carolinensis
ENSCPBG00000023866	TRMT1	93	64.659	ENSANAG00000023016	TRMT1	94	67.291	Aotus_nancymaae
ENSCPBG00000023866	TRMT1	93	64.286	ENSACLG00000010073	trmt1	92	68.505	Astatotilapia_calliptera
ENSCPBG00000023866	TRMT1	89	67.337	ENSAMXG00000012026	trmt1	89	66.275	Astyanax_mexicanus
ENSCPBG00000023866	TRMT1	87	70.389	ENSBTAG00000019325	TRMT1	84	70.238	Bos_taurus
ENSCPBG00000023866	TRMT1	77	42.857	WBGene00006613	trm-1	93	42.389	Caenorhabditis_elegans
ENSCPBG00000023866	TRMT1	94	64.890	ENSCJAG00000004566	TRMT1	96	64.263	Callithrix_jacchus
ENSCPBG00000023866	TRMT1	97	65.379	ENSCAFG00000017070	TRMT1	93	69.983	Canis_familiaris
ENSCPBG00000023866	TRMT1	87	69.966	ENSCAFG00020005397	TRMT1	91	69.712	Canis_lupus_dingo
ENSCPBG00000023866	TRMT1	87	70.777	ENSCHIG00000013569	TRMT1	89	70.628	Capra_hircus
ENSCPBG00000023866	TRMT1	94	63.537	ENSTSYG00000003207	TRMT1	95	63.224	Carlito_syrichta
ENSCPBG00000023866	TRMT1	72	71.933	ENSCAPG00000003355	TRMT1	88	71.726	Cavia_aperea
ENSCPBG00000023866	TRMT1	85	69.792	ENSCPOG00000011754	TRMT1	89	67.973	Cavia_porcellus
ENSCPBG00000023866	TRMT1	94	64.455	ENSCCAG00000022263	TRMT1	95	66.553	Cebus_capucinus
ENSCPBG00000023866	TRMT1	69	57.759	ENSCATG00000038220	-	82	57.113	Cercocebus_atys
ENSCPBG00000023866	TRMT1	94	66.981	ENSCATG00000039850	TRMT1	94	66.981	Cercocebus_atys
ENSCPBG00000023866	TRMT1	94	66.195	ENSCLAG00000015295	TRMT1	92	67.119	Chinchilla_lanigera
ENSCPBG00000023866	TRMT1	78	70.152	ENSCSAG00000006500	TRMT1	97	70.152	Chlorocebus_sabaeus
ENSCPBG00000023866	TRMT1	82	47.985	ENSCING00000002884	-	97	47.802	Ciona_intestinalis
ENSCPBG00000023866	TRMT1	81	48.148	ENSCSAVG00000010927	-	100	47.166	Ciona_savignyi
ENSCPBG00000023866	TRMT1	94	52.904	ENSCANG00000040631	TRMT1	95	52.276	Colobus_angolensis_palliatus
ENSCPBG00000023866	TRMT1	87	51.265	ENSCANG00000031650	-	90	52.277	Colobus_angolensis_palliatus
ENSCPBG00000023866	TRMT1	92	66.181	ENSCGRG00001022594	Trmt1	92	66.019	Cricetulus_griseus_chok1gshd
ENSCPBG00000023866	TRMT1	92	66.181	ENSCGRG00000017732	Trmt1	90	66.019	Cricetulus_griseus_crigri
ENSCPBG00000023866	TRMT1	84	69.519	ENSCSEG00000001643	trmt1	84	71.150	Cynoglossus_semilaevis
ENSCPBG00000023866	TRMT1	84	71.020	ENSCVAG00000011886	trmt1	85	71.020	Cyprinodon_variegatus
ENSCPBG00000023866	TRMT1	90	64.696	ENSDARG00000010978	trmt1	89	64.696	Danio_rerio
ENSCPBG00000023866	TRMT1	79	46.667	ENSDNOG00000048240	-	91	45.856	Dasypus_novemcinctus
ENSCPBG00000023866	TRMT1	87	67.627	ENSDORG00000014298	Trmt1	89	67.627	Dipodomys_ordii
ENSCPBG00000023866	TRMT1	81	48.080	FBgn0032430	CG6388	92	47.898	Drosophila_melanogaster
ENSCPBG00000023866	TRMT1	78	55.598	ENSEBUG00000003449	trmt1	76	55.747	Eptatretus_burgeri
ENSCPBG00000023866	TRMT1	87	68.792	ENSEASG00005004050	TRMT1	93	67.953	Equus_asinus_asinus
ENSCPBG00000023866	TRMT1	87	69.128	ENSECAG00000016149	TRMT1	93	68.289	Equus_caballus
ENSCPBG00000023866	TRMT1	50	75.697	ENSEEUG00000014102	-	100	60.000	Erinaceus_europaeus
ENSCPBG00000023866	TRMT1	85	67.895	ENSELUG00000021659	trmt1	85	66.725	Esox_lucius
ENSCPBG00000023866	TRMT1	94	66.718	ENSFCAG00000000483	TRMT1	95	66.719	Felis_catus
ENSCPBG00000023866	TRMT1	94	65.062	ENSFDAG00000007386	TRMT1	95	65.055	Fukomys_damarensis
ENSCPBG00000023866	TRMT1	77	72.957	ENSFHEG00000012865	trmt1	86	72.763	Fundulus_heteroclitus
ENSCPBG00000023866	TRMT1	85	63.074	ENSGMOG00000006564	trmt1	98	63.251	Gadus_morhua
ENSCPBG00000023866	TRMT1	85	70.996	ENSGAFG00000011862	trmt1	88	70.996	Gambusia_affinis
ENSCPBG00000023866	TRMT1	85	69.081	ENSGACG00000000227	trmt1	92	69.081	Gasterosteus_aculeatus
ENSCPBG00000023866	TRMT1	100	93.243	ENSGAGG00000016432	TRMT1	100	92.643	Gopherus_agassizii
ENSCPBG00000023866	TRMT1	87	70.289	ENSGGOG00000014007	TRMT1	89	70.289	Gorilla_gorilla
ENSCPBG00000023866	TRMT1	83	62.976	ENSHBUG00000008821	trmt1	92	62.976	Haplochromis_burtoni
ENSCPBG00000023866	TRMT1	94	65.258	ENSHGLG00000015972	TRMT1	95	65.102	Heterocephalus_glaber_female
ENSCPBG00000023866	TRMT1	94	60.938	ENSHGLG00100018112	TRMT1	95	60.781	Heterocephalus_glaber_male
ENSCPBG00000023866	TRMT1	85	66.314	ENSHCOG00000009447	trmt1	88	66.314	Hippocampus_comes
ENSCPBG00000023866	TRMT1	88	65.609	ENSIPUG00000002899	trmt1	88	65.776	Ictalurus_punctatus
ENSCPBG00000023866	TRMT1	93	65.924	ENSSTOG00000012531	TRMT1	92	67.110	Ictidomys_tridecemlineatus
ENSCPBG00000023866	TRMT1	92	67.097	ENSJJAG00000017154	Trmt1	92	67.097	Jaculus_jaculus
ENSCPBG00000023866	TRMT1	87	69.113	ENSKMAG00000011809	trmt1	95	70.107	Kryptolebias_marmoratus
ENSCPBG00000023866	TRMT1	85	70.213	ENSLBEG00000012703	trmt1	84	69.965	Labrus_bergylta
ENSCPBG00000023866	TRMT1	85	63.717	ENSLACG00000014585	TRMT1	97	61.775	Latimeria_chalumnae
ENSCPBG00000023866	TRMT1	72	72.385	ENSLOCG00000006479	trmt1	84	71.967	Lepisosteus_oculatus
ENSCPBG00000023866	TRMT1	94	66.354	ENSLAFG00000014072	TRMT1	96	65.732	Loxodonta_africana
ENSCPBG00000023866	TRMT1	94	66.981	ENSMFAG00000033143	TRMT1	94	66.981	Macaca_fascicularis
ENSCPBG00000023866	TRMT1	86	66.954	ENSMMUG00000001167	TRMT1	89	66.954	Macaca_mulatta
ENSCPBG00000023866	TRMT1	94	66.981	ENSMNEG00000037867	TRMT1	94	66.981	Macaca_nemestrina
ENSCPBG00000023866	TRMT1	94	67.138	ENSMLEG00000016142	TRMT1	95	67.138	Mandrillus_leucophaeus
ENSCPBG00000023866	TRMT1	85	71.454	ENSMAMG00000004357	trmt1	85	71.099	Mastacembelus_armatus
ENSCPBG00000023866	TRMT1	95	62.539	ENSMZEG00005014510	trmt1	92	64.217	Maylandia_zebra
ENSCPBG00000023866	TRMT1	89	67.608	ENSMAUG00000011134	Trmt1	91	67.442	Mesocricetus_auratus
ENSCPBG00000023866	TRMT1	90	68.730	ENSMICG00000000793	TRMT1	93	68.293	Microcebus_murinus
ENSCPBG00000023866	TRMT1	94	66.562	ENSMOCG00000015895	Trmt1	93	65.931	Microtus_ochrogaster
ENSCPBG00000023866	TRMT1	85	70.463	ENSMMOG00000011097	trmt1	92	69.751	Mola_mola
ENSCPBG00000023866	TRMT1	89	68.657	ENSMODG00000011619	TRMT1	98	68.657	Monodelphis_domestica
ENSCPBG00000023866	TRMT1	94	66.876	MGP_CAROLIEiJ_G0031304	Trmt1	97	67.969	Mus_caroli
ENSCPBG00000023866	TRMT1	94	66.875	ENSMUSG00000001909	Trmt1	94	66.562	Mus_musculus
ENSCPBG00000023866	TRMT1	94	66.719	MGP_SPRETEiJ_G0032422	Trmt1	97	66.797	Mus_spretus
ENSCPBG00000023866	TRMT1	88	70.588	ENSMPUG00000004210	TRMT1	85	70.608	Mustela_putorius_furo
ENSCPBG00000023866	TRMT1	94	66.254	ENSMLUG00000012809	TRMT1	93	65.635	Myotis_lucifugus
ENSCPBG00000023866	TRMT1	90	68.033	ENSNGAG00000022486	Trmt1	92	68.033	Nannospalax_galili
ENSCPBG00000023866	TRMT1	73	74.233	ENSNBRG00000024376	trmt1	84	74.233	Neolamprologus_brichardi
ENSCPBG00000023866	TRMT1	70	71.812	ENSNLEG00000013019	-	87	71.812	Nomascus_leucogenys
ENSCPBG00000023866	TRMT1	87	69.896	ENSMEUG00000013756	TRMT1	99	69.550	Notamacropus_eugenii
ENSCPBG00000023866	TRMT1	76	72.330	ENSOPRG00000009471	-	76	72.330	Ochotona_princeps
ENSCPBG00000023866	TRMT1	87	69.573	ENSODEG00000010323	TRMT1	89	69.402	Octodon_degus
ENSCPBG00000023866	TRMT1	94	66.242	ENSONIG00000000400	trmt1	91	71.150	Oreochromis_niloticus
ENSCPBG00000023866	TRMT1	78	69.623	ENSOCUG00000021934	TRMT1	97	69.623	Oryctolagus_cuniculus
ENSCPBG00000023866	TRMT1	90	63.339	ENSORLG00000020074	trmt1	90	67.073	Oryzias_latipes
ENSCPBG00000023866	TRMT1	85	70.547	ENSORLG00020007561	trmt1	89	69.406	Oryzias_latipes_hni
ENSCPBG00000023866	TRMT1	90	67.053	ENSORLG00015006547	trmt1	92	66.833	Oryzias_latipes_hsok
ENSCPBG00000023866	TRMT1	88	69.640	ENSOMEG00000019343	trmt1	89	69.125	Oryzias_melastigma
ENSCPBG00000023866	TRMT1	89	67.758	ENSOGAG00000025576	TRMT1	95	67.267	Otolemur_garnettii
ENSCPBG00000023866	TRMT1	87	56.926	ENSOARG00000009397	TRMT1	76	66.667	Ovis_aries
ENSCPBG00000023866	TRMT1	94	61.059	ENSPPRG00000012117	TRMT1	96	60.093	Panthera_pardus
ENSCPBG00000023866	TRMT1	73	67.442	ENSPTIG00000008833	TRMT1	92	67.449	Panthera_tigris_altaica
ENSCPBG00000023866	TRMT1	87	70.289	ENSPTRG00000010557	TRMT1	89	70.289	Pan_troglodytes
ENSCPBG00000023866	TRMT1	84	51.291	ENSPTRG00000050421	-	91	51.291	Pan_troglodytes
ENSCPBG00000023866	TRMT1	71	56.907	ENSPANG00000034058	-	82	56.301	Papio_anubis
ENSCPBG00000023866	TRMT1	94	66.981	ENSPANG00000009247	TRMT1	95	66.981	Papio_anubis
ENSCPBG00000023866	TRMT1	85	69.366	ENSPKIG00000005309	trmt1	84	68.662	Paramormyrops_kingsleyae
ENSCPBG00000023866	TRMT1	95	71.562	ENSPSIG00000008762	TRMT1	92	71.250	Pelodiscus_sinensis
ENSCPBG00000023866	TRMT1	85	70.796	ENSPMGG00000019764	trmt1	96	67.107	Periophthalmus_magnuspinnatus
ENSCPBG00000023866	TRMT1	94	66.041	ENSPEMG00000016247	Trmt1	94	65.884	Peromyscus_maniculatus_bairdii
ENSCPBG00000023866	TRMT1	84	64.695	ENSPMAG00000004329	trmt1	89	64.695	Petromyzon_marinus
ENSCPBG00000023866	TRMT1	93	67.035	ENSPCIG00000019273	TRMT1	96	67.035	Phascolarctos_cinereus
ENSCPBG00000023866	TRMT1	91	67.210	ENSPFOG00000008527	trmt1	88	71.174	Poecilia_formosa
ENSCPBG00000023866	TRMT1	91	66.069	ENSPLAG00000018788	trmt1	97	68.254	Poecilia_latipinna
ENSCPBG00000023866	TRMT1	85	71.454	ENSPMEG00000013120	trmt1	88	71.174	Poecilia_mexicana
ENSCPBG00000023866	TRMT1	85	70.641	ENSPREG00000000211	trmt1	85	70.641	Poecilia_reticulata
ENSCPBG00000023866	TRMT1	94	66.354	ENSPPYG00000009622	TRMT1	95	66.354	Pongo_abelii
ENSCPBG00000023866	TRMT1	87	63.621	ENSPCAG00000003698	TRMT1	91	63.621	Procavia_capensis
ENSCPBG00000023866	TRMT1	94	66.667	ENSPCOG00000008653	TRMT1	95	66.044	Propithecus_coquereli
ENSCPBG00000023866	TRMT1	89	68.464	ENSPVAG00000015076	TRMT1	93	67.647	Pteropus_vampyrus
ENSCPBG00000023866	TRMT1	84	66.548	ENSPNYG00000013960	trmt1	91	66.548	Pundamilia_nyererei
ENSCPBG00000023866	TRMT1	71	70.316	ENSPNAG00000024859	trmt1	83	70.316	Pygocentrus_nattereri
ENSCPBG00000023866	TRMT1	88	69.205	ENSRNOG00000002914	Trmt1	92	68.878	Rattus_norvegicus
ENSCPBG00000023866	TRMT1	87	50.000	ENSRBIG00000037505	-	91	50.850	Rhinopithecus_bieti
ENSCPBG00000023866	TRMT1	94	66.352	ENSRBIG00000038324	TRMT1	94	65.723	Rhinopithecus_bieti
ENSCPBG00000023866	TRMT1	87	49.150	ENSRROG00000031847	-	90	50.000	Rhinopithecus_roxellana
ENSCPBG00000023866	TRMT1	94	66.509	ENSRROG00000028599	TRMT1	94	65.881	Rhinopithecus_roxellana
ENSCPBG00000023866	TRMT1	76	37.593	YDR120C	-	92	37.873	Saccharomyces_cerevisiae
ENSCPBG00000023866	TRMT1	94	63.780	ENSSBOG00000028861	TRMT1	95	66.214	Saimiri_boliviensis_boliviensis
ENSCPBG00000023866	TRMT1	85	71.986	ENSSHAG00000014381	TRMT1	99	66.250	Sarcophilus_harrisii
ENSCPBG00000023866	TRMT1	86	69.123	ENSSFOG00015004139	trmt1	84	68.947	Scleropages_formosus
ENSCPBG00000023866	TRMT1	85	71.979	ENSSMAG00000021136	trmt1	85	71.529	Scophthalmus_maximus
ENSCPBG00000023866	TRMT1	85	71.099	ENSSDUG00000012740	trmt1	84	70.922	Seriola_dumerili
ENSCPBG00000023866	TRMT1	85	70.922	ENSSLDG00000005971	trmt1	84	70.745	Seriola_lalandi_dorsalis
ENSCPBG00000023866	TRMT1	77	71.068	ENSSARG00000005138	TRMT1	91	71.068	Sorex_araneus
ENSCPBG00000023866	TRMT1	83	63.063	ENSSPUG00000001084	TRMT1	94	62.230	Sphenodon_punctatus
ENSCPBG00000023866	TRMT1	84	69.340	ENSSPAG00000007153	trmt1	93	69.162	Stegastes_partitus
ENSCPBG00000023866	TRMT1	87	69.882	ENSSSCG00000013744	TRMT1	93	69.882	Sus_scrofa
ENSCPBG00000023866	TRMT1	83	66.259	ENSTRUG00000010700	trmt1	85	67.199	Takifugu_rubripes
ENSCPBG00000023866	TRMT1	84	70.893	ENSTNIG00000018808	trmt1	97	70.893	Tetraodon_nigroviridis
ENSCPBG00000023866	TRMT1	87	66.779	ENSTTRG00000006379	TRMT1	90	66.275	Tursiops_truncatus
ENSCPBG00000023866	TRMT1	94	66.667	ENSUAMG00000022911	TRMT1	97	66.877	Ursus_americanus
ENSCPBG00000023866	TRMT1	93	66.928	ENSUMAG00000006027	TRMT1	97	66.772	Ursus_maritimus
ENSCPBG00000023866	TRMT1	94	67.030	ENSVVUG00000024177	TRMT1	90	69.983	Vulpes_vulpes
ENSCPBG00000023866	TRMT1	73	73.101	ENSXETG00000033863	TRMT1	97	73.101	Xenopus_tropicalis
ENSCPBG00000023866	TRMT1	85	71.352	ENSXCOG00000015733	trmt1	88	71.352	Xiphophorus_couchianus
ENSCPBG00000023866	TRMT1	85	70.442	ENSXMAG00000013823	trmt1	98	70.442	Xiphophorus_maculatus