EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000024059 (Gene tree)
Gene ID: 101950056
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 19425 bases
Position: chrKK088248.1:1254490-1273914
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000034507	RRM_1	PF00076.22	3.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000040476	RBM38-201	1630	-	ENSCPBP00000034507	215 (aa)	XP_005305894	UPI000388F63D

Gene Model

Click here to download ENSCPBG00000024059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000024059	RBM38	67	30.864	ENSCPBG00000009942	MSI2	68	31.169
ENSCPBG00000024059	RBM38	100	69.737	ENSCPBG00000008291	RBM24	100	75.217
ENSCPBG00000024059	RBM38	53	36.047	ENSCPBG00000011349	MSI1	62	36.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024059	RBM38	100	81.651	ENSG00000132819	RBM38	94	92.241	Homo_sapiens
ENSCPBG00000024059	RBM38	100	58.824	ENSAPOG00000003301	rbm38	93	58.824	Acanthochromis_polyacanthus
ENSCPBG00000024059	RBM38	99	69.767	ENSAPOG00000009939	-	92	71.759	Acanthochromis_polyacanthus
ENSCPBG00000024059	RBM38	100	58.403	ENSACIG00000000010	rbm38	93	58.403	Amphilophus_citrinellus
ENSCPBG00000024059	RBM38	100	69.196	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSCPBG00000024059	RBM38	100	59.244	ENSAOCG00000013497	-	93	59.244	Amphiprion_ocellaris
ENSCPBG00000024059	RBM38	98	68.224	ENSAOCG00000012559	RBM38	88	71.163	Amphiprion_ocellaris
ENSCPBG00000024059	RBM38	99	63.755	ENSAPEG00000023581	-	93	66.953	Amphiprion_percula
ENSCPBG00000024059	RBM38	100	61.883	ENSAPEG00000013137	rbm38	93	59.244	Amphiprion_percula
ENSCPBG00000024059	RBM38	99	66.087	ENSATEG00000016710	-	93	67.811	Anabas_testudineus
ENSCPBG00000024059	RBM38	100	59.821	ENSATEG00000016366	rbm38	94	59.821	Anabas_testudineus
ENSCPBG00000024059	RBM38	100	87.500	ENSACAG00000016238	RBM38	90	87.500	Anolis_carolinensis
ENSCPBG00000024059	RBM38	100	81.193	ENSANAG00000031959	RBM38	100	81.193	Aotus_nancymaae
ENSCPBG00000024059	RBM38	100	67.949	ENSACLG00000019514	-	95	69.362	Astatotilapia_calliptera
ENSCPBG00000024059	RBM38	97	59.091	ENSAMXG00000038120	rbm38	92	59.545	Astyanax_mexicanus
ENSCPBG00000024059	RBM38	99	68.142	ENSAMXG00000015601	-	92	71.171	Astyanax_mexicanus
ENSCPBG00000024059	RBM38	100	80.275	ENSBTAG00000008105	RBM38	90	80.275	Bos_taurus
ENSCPBG00000024059	RBM38	60	66.154	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSCPBG00000024059	RBM38	100	82.110	ENSCJAG00000019139	RBM38	81	94.898	Callithrix_jacchus
ENSCPBG00000024059	RBM38	100	83.028	ENSCAFG00020021943	RBM38	90	83.028	Canis_lupus_dingo
ENSCPBG00000024059	RBM38	100	79.817	ENSCHIG00000002609	RBM38	90	79.817	Capra_hircus
ENSCPBG00000024059	RBM38	100	81.651	ENSCPOG00000012781	RBM38	90	81.651	Cavia_porcellus
ENSCPBG00000024059	RBM38	100	82.110	ENSCCAG00000036872	RBM38	81	94.898	Cebus_capucinus
ENSCPBG00000024059	RBM38	100	81.193	ENSCATG00000032133	RBM38	81	94.898	Cercocebus_atys
ENSCPBG00000024059	RBM38	100	80.734	ENSCLAG00000005906	RBM38	94	80.734	Chinchilla_lanigera
ENSCPBG00000024059	RBM38	100	81.193	ENSCSAG00000015503	RBM38	90	81.193	Chlorocebus_sabaeus
ENSCPBG00000024059	RBM38	69	63.057	ENSCING00000025102	-	68	63.057	Ciona_intestinalis
ENSCPBG00000024059	RBM38	72	63.125	ENSCSAVG00000001132	-	63	62.130	Ciona_savignyi
ENSCPBG00000024059	RBM38	100	61.927	ENSCANG00000030105	-	79	61.927	Colobus_angolensis_palliatus
ENSCPBG00000024059	RBM38	100	77.982	ENSCGRG00001012928	Rbm38	91	78.440	Cricetulus_griseus_chok1gshd
ENSCPBG00000024059	RBM38	100	68.807	ENSCSEG00000004701	-	94	71.493	Cynoglossus_semilaevis
ENSCPBG00000024059	RBM38	71	64.516	ENSCSEG00000020943	rbm38	64	57.949	Cynoglossus_semilaevis
ENSCPBG00000024059	RBM38	99	68.261	ENSCVAG00000005472	-	93	68.670	Cyprinodon_variegatus
ENSCPBG00000024059	RBM38	85	64.550	ENSCVAG00000015952	rbm38	92	57.265	Cyprinodon_variegatus
ENSCPBG00000024059	RBM38	99	65.471	ENSDARG00000058818	rbm38	93	65.471	Danio_rerio
ENSCPBG00000024059	RBM38	100	80.556	ENSDNOG00000032004	RBM38	100	80.556	Dasypus_novemcinctus
ENSCPBG00000024059	RBM38	100	81.193	ENSECAG00000007700	RBM38	90	81.193	Equus_caballus
ENSCPBG00000024059	RBM38	100	78.539	ENSEEUG00000013489	RBM38	91	79.909	Erinaceus_europaeus
ENSCPBG00000024059	RBM38	100	67.094	ENSELUG00000005849	-	95	67.094	Esox_lucius
ENSCPBG00000024059	RBM38	93	62.745	ENSELUG00000000585	-	88	62.745	Esox_lucius
ENSCPBG00000024059	RBM38	100	82.110	ENSFCAG00000042916	RBM38	81	93.878	Felis_catus
ENSCPBG00000024059	RBM38	80	94.186	ENSFALG00000010805	RBM38	90	94.186	Ficedula_albicollis
ENSCPBG00000024059	RBM38	99	71.759	ENSFHEG00000006160	-	92	71.759	Fundulus_heteroclitus
ENSCPBG00000024059	RBM38	99	55.932	ENSFHEG00000017748	rbm38	92	55.932	Fundulus_heteroclitus
ENSCPBG00000024059	RBM38	84	70.652	ENSGMOG00000016655	-	98	75.135	Gadus_morhua
ENSCPBG00000024059	RBM38	100	95.349	ENSGALG00000026081	RBM38	100	95.349	Gallus_gallus
ENSCPBG00000024059	RBM38	100	61.751	ENSGACG00000015224	rbm38	100	61.751	Gasterosteus_aculeatus
ENSCPBG00000024059	RBM38	98	68.056	ENSGACG00000009873	-	98	69.124	Gasterosteus_aculeatus
ENSCPBG00000024059	RBM38	100	99.070	ENSGAGG00000001187	RBM38	100	99.070	Gopherus_agassizii
ENSCPBG00000024059	RBM38	100	59.821	ENSHBUG00000012058	rbm38	93	59.244	Haplochromis_burtoni
ENSCPBG00000024059	RBM38	100	70.270	ENSHBUG00000011778	-	94	71.749	Haplochromis_burtoni
ENSCPBG00000024059	RBM38	100	76.959	ENSHGLG00000015077	RBM38	90	80.184	Heterocephalus_glaber_female
ENSCPBG00000024059	RBM38	91	71.642	ENSHCOG00000005622	-	56	72.637	Hippocampus_comes
ENSCPBG00000024059	RBM38	91	54.592	ENSHCOG00000019040	rbm38	81	54.592	Hippocampus_comes
ENSCPBG00000024059	RBM38	99	68.889	ENSIPUG00000019349	-	92	68.889	Ictalurus_punctatus
ENSCPBG00000024059	RBM38	98	51.261	ENSKMAG00000012402	rbm38	98	50.833	Kryptolebias_marmoratus
ENSCPBG00000024059	RBM38	100	68.468	ENSLBEG00000016163	RBM38	94	71.300	Labrus_bergylta
ENSCPBG00000024059	RBM38	100	55.882	ENSLBEG00000018878	rbm38	93	55.882	Labrus_bergylta
ENSCPBG00000024059	RBM38	100	73.991	ENSLOCG00000003456	rbm38	94	73.991	Lepisosteus_oculatus
ENSCPBG00000024059	RBM38	100	81.193	ENSMFAG00000043808	RBM38	81	94.898	Macaca_fascicularis
ENSCPBG00000024059	RBM38	100	81.193	ENSMMUG00000031391	RBM38	81	94.898	Macaca_mulatta
ENSCPBG00000024059	RBM38	100	81.193	ENSMNEG00000034683	RBM38	81	94.898	Macaca_nemestrina
ENSCPBG00000024059	RBM38	52	76.577	ENSMLEG00000043261	-	90	76.577	Mandrillus_leucophaeus
ENSCPBG00000024059	RBM38	100	57.322	ENSMAMG00000024135	rbm38	93	57.322	Mastacembelus_armatus
ENSCPBG00000024059	RBM38	99	64.912	ENSMAMG00000020499	RBM38	93	67.241	Mastacembelus_armatus
ENSCPBG00000024059	RBM38	100	70.270	ENSMZEG00005000849	-	94	71.749	Maylandia_zebra
ENSCPBG00000024059	RBM38	100	59.244	ENSMZEG00005026036	rbm38	93	59.244	Maylandia_zebra
ENSCPBG00000024059	RBM38	100	78.440	ENSMAUG00000021211	Rbm38	91	78.899	Mesocricetus_auratus
ENSCPBG00000024059	RBM38	100	82.569	ENSMICG00000038011	RBM38	100	82.569	Microcebus_murinus
ENSCPBG00000024059	RBM38	100	78.899	ENSMOCG00000008715	Rbm38	91	79.358	Microtus_ochrogaster
ENSCPBG00000024059	RBM38	100	69.683	ENSMMOG00000020051	-	93	71.171	Mola_mola
ENSCPBG00000024059	RBM38	100	92.093	ENSMODG00000016458	RBM38	92	92.093	Monodelphis_domestica
ENSCPBG00000024059	RBM38	71	67.949	ENSMALG00000022327	rbm38	67	67.949	Monopterus_albus
ENSCPBG00000024059	RBM38	84	76.882	ENSMALG00000004680	RBM38	69	76.882	Monopterus_albus
ENSCPBG00000024059	RBM38	100	77.982	MGP_CAROLIEiJ_G0024745	Rbm38	91	81.193	Mus_caroli
ENSCPBG00000024059	RBM38	100	77.982	ENSMUSG00000027510	Rbm38	91	81.193	Mus_musculus
ENSCPBG00000024059	RBM38	100	77.523	MGP_PahariEiJ_G0026186	Rbm38	91	80.734	Mus_pahari
ENSCPBG00000024059	RBM38	100	77.523	MGP_SPRETEiJ_G0025665	Rbm38	91	80.734	Mus_spretus
ENSCPBG00000024059	RBM38	84	85.870	ENSMPUG00000006518	RBM38	93	85.027	Mustela_putorius_furo
ENSCPBG00000024059	RBM38	100	78.440	ENSMLUG00000011140	RBM38	100	78.440	Myotis_lucifugus
ENSCPBG00000024059	RBM38	100	67.949	ENSNBRG00000022545	-	95	69.362	Neolamprologus_brichardi
ENSCPBG00000024059	RBM38	100	60.352	ENSNBRG00000022685	rbm38	91	60.352	Neolamprologus_brichardi
ENSCPBG00000024059	RBM38	53	89.565	ENSMEUG00000005475	-	86	89.565	Notamacropus_eugenii
ENSCPBG00000024059	RBM38	100	80.734	ENSODEG00000007980	RBM38	90	80.734	Octodon_degus
ENSCPBG00000024059	RBM38	99	59.494	ENSONIG00000017073	rbm38	95	59.494	Oreochromis_niloticus
ENSCPBG00000024059	RBM38	99	67.811	ENSONIG00000020324	-	95	69.231	Oreochromis_niloticus
ENSCPBG00000024059	RBM38	100	92.558	ENSOANG00000009259	RBM38	83	92.558	Ornithorhynchus_anatinus
ENSCPBG00000024059	RBM38	100	54.812	ENSORLG00000012154	rbm38	93	56.067	Oryzias_latipes
ENSCPBG00000024059	RBM38	100	62.343	ENSORLG00000027180	-	95	66.667	Oryzias_latipes
ENSCPBG00000024059	RBM38	100	56.667	ENSORLG00020017871	rbm38	93	56.667	Oryzias_latipes_hni
ENSCPBG00000024059	RBM38	100	62.343	ENSORLG00020020751	-	95	66.667	Oryzias_latipes_hni
ENSCPBG00000024059	RBM38	100	62.605	ENSORLG00015017040	-	95	67.089	Oryzias_latipes_hsok
ENSCPBG00000024059	RBM38	98	58.796	ENSORLG00015012606	rbm38	93	56.485	Oryzias_latipes_hsok
ENSCPBG00000024059	RBM38	100	63.713	ENSOMEG00000023912	-	95	67.227	Oryzias_melastigma
ENSCPBG00000024059	RBM38	100	56.485	ENSOMEG00000006805	rbm38	93	56.485	Oryzias_melastigma
ENSCPBG00000024059	RBM38	100	81.193	ENSOGAG00000029136	RBM38	90	81.193	Otolemur_garnettii
ENSCPBG00000024059	RBM38	100	82.110	ENSPPRG00000009507	RBM38	81	93.878	Panthera_pardus
ENSCPBG00000024059	RBM38	58	92.742	ENSPTRG00000045845	-	68	92.742	Pan_troglodytes
ENSCPBG00000024059	RBM38	94	82.039	ENSPTRG00000013661	RBM38	98	82.039	Pan_troglodytes
ENSCPBG00000024059	RBM38	98	67.290	ENSPANG00000033127	-	91	66.355	Papio_anubis
ENSCPBG00000024059	RBM38	100	81.193	ENSPANG00000020919	-	81	94.898	Papio_anubis
ENSCPBG00000024059	RBM38	99	69.725	ENSPKIG00000018122	-	95	88.288	Paramormyrops_kingsleyae
ENSCPBG00000024059	RBM38	100	65.801	ENSPKIG00000025417	rbm38	95	66.234	Paramormyrops_kingsleyae
ENSCPBG00000024059	RBM38	100	97.209	ENSPSIG00000011649	RBM38	92	97.209	Pelodiscus_sinensis
ENSCPBG00000024059	RBM38	99	63.404	ENSPMGG00000017094	-	93	66.953	Periophthalmus_magnuspinnatus
ENSCPBG00000024059	RBM38	100	55.508	ENSPMGG00000011343	rbm38	94	55.932	Periophthalmus_magnuspinnatus
ENSCPBG00000024059	RBM38	100	91.163	ENSPCIG00000013648	RBM38	92	91.163	Phascolarctos_cinereus
ENSCPBG00000024059	RBM38	84	63.298	ENSPFOG00000011658	rbm38	92	56.540	Poecilia_formosa
ENSCPBG00000024059	RBM38	84	62.766	ENSPLAG00000005218	rbm38	92	56.540	Poecilia_latipinna
ENSCPBG00000024059	RBM38	99	67.660	ENSPLAG00000002500	-	93	69.362	Poecilia_latipinna
ENSCPBG00000024059	RBM38	84	62.567	ENSPMEG00000015770	rbm38	92	56.540	Poecilia_mexicana
ENSCPBG00000024059	RBM38	84	63.830	ENSPREG00000007398	rbm38	92	57.384	Poecilia_reticulata
ENSCPBG00000024059	RBM38	100	82.569	ENSPCOG00000026201	RBM38	80	94.898	Propithecus_coquereli
ENSCPBG00000024059	RBM38	100	53.211	ENSPVAG00000006457	RBM38	66	92.857	Pteropus_vampyrus
ENSCPBG00000024059	RBM38	100	70.270	ENSPNYG00000019727	-	100	86.325	Pundamilia_nyererei
ENSCPBG00000024059	RBM38	100	58.824	ENSPNYG00000021373	rbm38	93	58.824	Pundamilia_nyererei
ENSCPBG00000024059	RBM38	99	68.018	ENSPNAG00000015123	-	96	75.000	Pygocentrus_nattereri
ENSCPBG00000024059	RBM38	97	65.297	ENSPNAG00000010596	rbm38	91	65.297	Pygocentrus_nattereri
ENSCPBG00000024059	RBM38	100	79.817	ENSRNOG00000006420	Rbm38	91	79.817	Rattus_norvegicus
ENSCPBG00000024059	RBM38	100	66.055	ENSRROG00000036388	-	89	66.055	Rhinopithecus_roxellana
ENSCPBG00000024059	RBM38	100	81.193	ENSSBOG00000031053	RBM38	92	94.898	Saimiri_boliviensis_boliviensis
ENSCPBG00000024059	RBM38	98	65.297	ENSSFOG00015004453	rbm38	92	69.369	Scleropages_formosus
ENSCPBG00000024059	RBM38	100	60.084	ENSSDUG00000022611	rbm38	93	60.084	Seriola_dumerili
ENSCPBG00000024059	RBM38	99	67.391	ENSSDUG00000021082	RBM38	93	67.382	Seriola_dumerili
ENSCPBG00000024059	RBM38	99	67.391	ENSSLDG00000011778	RBM38	93	67.382	Seriola_lalandi_dorsalis
ENSCPBG00000024059	RBM38	100	61.435	ENSSLDG00000010845	rbm38	92	61.435	Seriola_lalandi_dorsalis
ENSCPBG00000024059	RBM38	99	68.224	ENSSPAG00000020989	RBM38	92	71.628	Stegastes_partitus
ENSCPBG00000024059	RBM38	100	58.996	ENSSPAG00000011113	rbm38	93	58.996	Stegastes_partitus
ENSCPBG00000024059	RBM38	100	82.569	ENSSSCG00000007504	RBM38	90	82.569	Sus_scrofa
ENSCPBG00000024059	RBM38	100	64.706	ENSTRUG00000019869	-	95	66.946	Takifugu_rubripes
ENSCPBG00000024059	RBM38	84	66.138	ENSTRUG00000024954	rbm38	80	63.547	Takifugu_rubripes
ENSCPBG00000024059	RBM38	100	67.111	ENSTNIG00000007093	-	100	69.469	Tetraodon_nigroviridis
ENSCPBG00000024059	RBM38	100	81.193	ENSUAMG00000019780	RBM38	90	81.651	Ursus_americanus
ENSCPBG00000024059	RBM38	100	83.028	ENSVVUG00000017246	RBM38	90	83.028	Vulpes_vulpes
ENSCPBG00000024059	RBM38	100	82.192	ENSXETG00000011268	rbm38	99	83.105	Xenopus_tropicalis
ENSCPBG00000024059	RBM38	62	76.087	ENSXCOG00000017324	-	60	76.087	Xiphophorus_couchianus
ENSCPBG00000024059	RBM38	84	64.706	ENSXMAG00000023662	rbm38	92	56.356	Xiphophorus_maculatus