EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000024218 (Gene tree)
Gene ID: -
Gene Symbol: SUB1
Alias: PC4|p14|p15
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 13799 bases
Position: chrKK088217.1:2203814-2217612
Accession: 19985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000034712	PC4	PF02229.16	1.5e-24	1	1
ENSCPBP00000034713	PC4	PF02229.16	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000040733	SUB1-201	793	-	ENSCPBP00000034712	160 (aa)	-	-
ENSCPBT00000040734	SUB1-202	1473	-	ENSCPBP00000034713	184 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000024218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000024218	SUB1	79	56.693	ENSCPBG00000010898	-	100	56.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024218	SUB1	79	88.189	ENSG00000113387	SUB1	100	90.551	Homo_sapiens
ENSCPBG00000024218	SUB1	79	72.222	ENSAPOG00000005917	SUB1	100	71.429	Acanthochromis_polyacanthus
ENSCPBG00000024218	SUB1	81	86.154	ENSAMEG00000006238	SUB1	97	88.462	Ailuropoda_melanoleuca
ENSCPBG00000024218	SUB1	79	74.603	ENSACIG00000015976	sub1b	100	73.810	Amphilophus_citrinellus
ENSCPBG00000024218	SUB1	72	75.652	ENSAOCG00000007313	-	76	80.851	Amphiprion_ocellaris
ENSCPBG00000024218	SUB1	67	73.832	ENSAOCG00000002323	-	75	79.121	Amphiprion_ocellaris
ENSCPBG00000024218	SUB1	67	71.296	ENSAPEG00000017151	-	71	79.121	Amphiprion_percula
ENSCPBG00000024218	SUB1	79	75.397	ENSAPEG00000024347	sub1b	100	74.603	Amphiprion_percula
ENSCPBG00000024218	SUB1	79	73.016	ENSATEG00000010340	sub1b	100	72.222	Anabas_testudineus
ENSCPBG00000024218	SUB1	79	84.962	ENSACAG00000007974	SUB1	100	81.955	Anolis_carolinensis
ENSCPBG00000024218	SUB1	79	88.189	ENSANAG00000011651	-	100	90.551	Aotus_nancymaae
ENSCPBG00000024218	SUB1	79	88.095	ENSANAG00000023392	-	83	88.095	Aotus_nancymaae
ENSCPBG00000024218	SUB1	79	74.603	ENSACLG00000016875	sub1b	64	73.810	Astatotilapia_calliptera
ENSCPBG00000024218	SUB1	79	74.016	ENSAMXG00000037104	sub1b	100	73.228	Astyanax_mexicanus
ENSCPBG00000024218	SUB1	79	88.189	ENSBTAG00000021965	SUB1	100	90.551	Bos_taurus
ENSCPBG00000024218	SUB1	63	85.294	ENSCJAG00000018718	SUB1	98	88.235	Callithrix_jacchus
ENSCPBG00000024218	SUB1	82	86.364	ENSCAFG00000018879	-	92	88.636	Canis_familiaris
ENSCPBG00000024218	SUB1	73	80.342	ENSCAFG00000024488	-	86	86.111	Canis_familiaris
ENSCPBG00000024218	SUB1	82	86.364	ENSCAFG00000016713	-	100	88.636	Canis_familiaris
ENSCPBG00000024218	SUB1	79	88.281	ENSCAFG00020011479	-	77	88.281	Canis_lupus_dingo
ENSCPBG00000024218	SUB1	79	87.402	ENSCAFG00020016840	-	100	89.764	Canis_lupus_dingo
ENSCPBG00000024218	SUB1	79	88.189	ENSCHIG00000008460	SUB1	100	90.551	Capra_hircus
ENSCPBG00000024218	SUB1	81	76.154	ENSTSYG00000035366	-	85	78.462	Carlito_syrichta
ENSCPBG00000024218	SUB1	81	79.699	ENSTSYG00000014069	-	95	82.707	Carlito_syrichta
ENSCPBG00000024218	SUB1	79	88.189	ENSTSYG00000029948	-	100	90.551	Carlito_syrichta
ENSCPBG00000024218	SUB1	79	88.189	ENSCPOG00000031334	SUB1	100	90.551	Cavia_porcellus
ENSCPBG00000024218	SUB1	81	83.846	ENSCCAG00000033751	-	98	86.154	Cebus_capucinus
ENSCPBG00000024218	SUB1	81	81.395	ENSCCAG00000017043	-	95	81.395	Cebus_capucinus
ENSCPBG00000024218	SUB1	79	84.252	ENSCCAG00000020604	-	100	86.614	Cebus_capucinus
ENSCPBG00000024218	SUB1	79	88.189	ENSCCAG00000023605	-	100	90.551	Cebus_capucinus
ENSCPBG00000024218	SUB1	79	88.189	ENSCATG00000031199	SUB1	100	90.551	Cercocebus_atys
ENSCPBG00000024218	SUB1	79	86.719	ENSCLAG00000007522	SUB1	100	89.844	Chinchilla_lanigera
ENSCPBG00000024218	SUB1	79	88.189	ENSCSAG00000017172	-	100	90.551	Chlorocebus_sabaeus
ENSCPBG00000024218	SUB1	79	88.189	ENSCSAG00000019449	-	100	88.189	Chlorocebus_sabaeus
ENSCPBG00000024218	SUB1	79	88.189	ENSCANG00000029372	SUB1	100	90.551	Colobus_angolensis_palliatus
ENSCPBG00000024218	SUB1	79	74.016	ENSCANG00000028665	-	90	74.016	Colobus_angolensis_palliatus
ENSCPBG00000024218	SUB1	79	85.039	ENSCGRG00001003473	-	100	87.402	Cricetulus_griseus_chok1gshd
ENSCPBG00000024218	SUB1	79	76.378	ENSCGRG00001014660	-	100	76.378	Cricetulus_griseus_chok1gshd
ENSCPBG00000024218	SUB1	79	69.291	ENSCGRG00001016254	-	100	71.654	Cricetulus_griseus_chok1gshd
ENSCPBG00000024218	SUB1	79	76.378	ENSCGRG00000019368	-	100	76.378	Cricetulus_griseus_crigri
ENSCPBG00000024218	SUB1	79	85.039	ENSCGRG00000001133	-	100	87.402	Cricetulus_griseus_crigri
ENSCPBG00000024218	SUB1	79	71.654	ENSCGRG00000001489	-	100	74.016	Cricetulus_griseus_crigri
ENSCPBG00000024218	SUB1	79	72.222	ENSDARG00000007720	sub1b	100	69.841	Danio_rerio
ENSCPBG00000024218	SUB1	78	77.600	ENSDARG00000053446	sub1a	99	78.400	Danio_rerio
ENSCPBG00000024218	SUB1	79	84.252	ENSDNOG00000032396	-	100	86.614	Dasypus_novemcinctus
ENSCPBG00000024218	SUB1	79	85.827	ENSDNOG00000040794	-	100	88.189	Dasypus_novemcinctus
ENSCPBG00000024218	SUB1	79	86.614	ENSDORG00000013916	Sub1	100	88.976	Dipodomys_ordii
ENSCPBG00000024218	SUB1	79	88.189	ENSEASG00005007099	SUB1	100	90.551	Equus_asinus_asinus
ENSCPBG00000024218	SUB1	79	88.189	ENSECAG00000012399	SUB1	100	90.551	Equus_caballus
ENSCPBG00000024218	SUB1	63	84.158	ENSEEUG00000000436	SUB1	93	91.579	Erinaceus_europaeus
ENSCPBG00000024218	SUB1	79	87.402	ENSFCAG00000037288	SUB1	100	89.764	Felis_catus
ENSCPBG00000024218	SUB1	79	96.825	ENSFALG00000002143	SUB1	87	96.825	Ficedula_albicollis
ENSCPBG00000024218	SUB1	79	88.189	ENSFDAG00000017179	SUB1	100	90.551	Fukomys_damarensis
ENSCPBG00000024218	SUB1	79	95.238	ENSGALG00000034905	-	100	95.238	Gallus_gallus
ENSCPBG00000024218	SUB1	79	51.969	ENSGALG00000027147	-	75	57.895	Gallus_gallus
ENSCPBG00000024218	SUB1	79	99.206	ENSGALG00000003248	SUB1	100	99.206	Gallus_gallus
ENSCPBG00000024218	SUB1	79	72.222	ENSGACG00000003912	sub1b	100	71.429	Gasterosteus_aculeatus
ENSCPBG00000024218	SUB1	79	98.413	ENSGAGG00000013535	SUB1	100	98.413	Gopherus_agassizii
ENSCPBG00000024218	SUB1	79	88.189	ENSGGOG00000040900	SUB1	100	90.551	Gorilla_gorilla
ENSCPBG00000024218	SUB1	64	79.612	ENSHBUG00000013953	sub1b	70	79.787	Haplochromis_burtoni
ENSCPBG00000024218	SUB1	79	88.189	ENSHGLG00000006749	SUB1	100	90.551	Heterocephalus_glaber_female
ENSCPBG00000024218	SUB1	79	88.189	ENSHGLG00100014344	SUB1	100	90.551	Heterocephalus_glaber_male
ENSCPBG00000024218	SUB1	79	69.841	ENSHCOG00000001809	sub1b	100	69.048	Hippocampus_comes
ENSCPBG00000024218	SUB1	79	73.810	ENSIPUG00000008166	sub1	100	71.429	Ictalurus_punctatus
ENSCPBG00000024218	SUB1	79	72.093	ENSIPUG00000024367	SUB1	100	71.318	Ictalurus_punctatus
ENSCPBG00000024218	SUB1	79	87.402	ENSSTOG00000019364	SUB1	100	89.764	Ictidomys_tridecemlineatus
ENSCPBG00000024218	SUB1	79	85.039	ENSJJAG00000018885	Sub1	100	85.039	Jaculus_jaculus
ENSCPBG00000024218	SUB1	78	73.600	ENSLBEG00000010728	sub1b	99	72.800	Labrus_bergylta
ENSCPBG00000024218	SUB1	79	77.778	ENSLOCG00000006692	sub1b	100	76.984	Lepisosteus_oculatus
ENSCPBG00000024218	SUB1	79	89.764	ENSLAFG00000032088	-	100	90.551	Loxodonta_africana
ENSCPBG00000024218	SUB1	79	89.764	ENSLAFG00000011006	-	100	90.551	Loxodonta_africana
ENSCPBG00000024218	SUB1	81	78.462	ENSMFAG00000045643	-	62	80.769	Macaca_fascicularis
ENSCPBG00000024218	SUB1	79	88.189	ENSMFAG00000040728	SUB1	100	90.551	Macaca_fascicularis
ENSCPBG00000024218	SUB1	79	88.189	ENSMMUG00000046181	SUB1	100	90.551	Macaca_mulatta
ENSCPBG00000024218	SUB1	79	88.189	ENSMNEG00000037046	SUB1	100	90.551	Macaca_nemestrina
ENSCPBG00000024218	SUB1	79	73.228	ENSMLEG00000043436	-	90	73.228	Mandrillus_leucophaeus
ENSCPBG00000024218	SUB1	81	84.615	ENSMLEG00000030509	-	96	86.923	Mandrillus_leucophaeus
ENSCPBG00000024218	SUB1	79	88.189	ENSMLEG00000037017	-	100	90.551	Mandrillus_leucophaeus
ENSCPBG00000024218	SUB1	79	73.016	ENSMAMG00000018428	sub1b	100	72.222	Mastacembelus_armatus
ENSCPBG00000024218	SUB1	79	74.603	ENSMZEG00005021252	sub1b	100	73.810	Maylandia_zebra
ENSCPBG00000024218	SUB1	79	51.181	ENSMGAG00000001200	-	95	51.181	Meleagris_gallopavo
ENSCPBG00000024218	SUB1	79	99.206	ENSMGAG00000002906	SUB1	100	99.206	Meleagris_gallopavo
ENSCPBG00000024218	SUB1	79	85.039	ENSMAUG00000020232	Sub1	100	87.402	Mesocricetus_auratus
ENSCPBG00000024218	SUB1	79	88.189	ENSMICG00000014535	SUB1	100	90.551	Microcebus_murinus
ENSCPBG00000024218	SUB1	79	84.252	ENSMOCG00000018930	-	100	86.614	Microtus_ochrogaster
ENSCPBG00000024218	SUB1	79	77.953	ENSMOCG00000016424	-	100	77.165	Microtus_ochrogaster
ENSCPBG00000024218	SUB1	79	84.173	ENSMODG00000020410	SUB1	100	83.453	Monodelphis_domestica
ENSCPBG00000024218	SUB1	93	66.443	ENSMALG00000007163	sub1b	81	80.159	Monopterus_albus
ENSCPBG00000024218	SUB1	79	85.039	MGP_CAROLIEiJ_G0019676	Sub1	100	87.402	Mus_caroli
ENSCPBG00000024218	SUB1	79	85.827	ENSMUSG00000022205	Sub1	100	88.189	Mus_musculus
ENSCPBG00000024218	SUB1	79	84.252	MGP_PahariEiJ_G0016056	Sub1	100	86.614	Mus_pahari
ENSCPBG00000024218	SUB1	79	85.827	MGP_SPRETEiJ_G0020573	Sub1	100	88.189	Mus_spretus
ENSCPBG00000024218	SUB1	79	86.614	ENSMPUG00000018418	-	100	88.976	Mustela_putorius_furo
ENSCPBG00000024218	SUB1	79	87.402	ENSMPUG00000015185	-	100	89.764	Mustela_putorius_furo
ENSCPBG00000024218	SUB1	80	83.721	ENSMLUG00000009236	-	96	83.721	Myotis_lucifugus
ENSCPBG00000024218	SUB1	81	86.923	ENSMLUG00000013685	-	95	90.551	Myotis_lucifugus
ENSCPBG00000024218	SUB1	79	76.984	ENSNGAG00000017212	-	100	76.984	Nannospalax_galili
ENSCPBG00000024218	SUB1	79	84.127	ENSNGAG00000010782	-	84	84.127	Nannospalax_galili
ENSCPBG00000024218	SUB1	79	85.827	ENSNGAG00000014072	-	100	88.189	Nannospalax_galili
ENSCPBG00000024218	SUB1	64	78.641	ENSNBRG00000008451	sub1b	76	78.723	Neolamprologus_brichardi
ENSCPBG00000024218	SUB1	79	85.714	ENSNLEG00000035968	-	100	85.714	Nomascus_leucogenys
ENSCPBG00000024218	SUB1	79	87.500	ENSNLEG00000018383	-	96	89.844	Nomascus_leucogenys
ENSCPBG00000024218	SUB1	79	87.402	ENSNLEG00000036068	SUB1	100	89.764	Nomascus_leucogenys
ENSCPBG00000024218	SUB1	79	92.857	ENSMEUG00000007770	SUB1	100	92.857	Notamacropus_eugenii
ENSCPBG00000024218	SUB1	79	86.614	ENSOPRG00000012887	SUB1	100	88.976	Ochotona_princeps
ENSCPBG00000024218	SUB1	79	88.189	ENSODEG00000001937	-	100	90.551	Octodon_degus
ENSCPBG00000024218	SUB1	79	84.252	ENSODEG00000014558	-	84	85.039	Octodon_degus
ENSCPBG00000024218	SUB1	67	84.259	ENSODEG00000015114	-	98	86.885	Octodon_degus
ENSCPBG00000024218	SUB1	79	95.238	ENSOANG00000002328	SUB1	95	95.238	Ornithorhynchus_anatinus
ENSCPBG00000024218	SUB1	98	74.375	ENSOCUG00000006262	SUB1	73	76.250	Oryctolagus_cuniculus
ENSCPBG00000024218	SUB1	79	88.189	ENSOGAG00000009012	-	100	90.551	Otolemur_garnettii
ENSCPBG00000024218	SUB1	77	87.097	ENSOGAG00000000337	-	100	89.516	Otolemur_garnettii
ENSCPBG00000024218	SUB1	79	88.189	ENSOARG00000012154	SUB1	100	90.551	Ovis_aries
ENSCPBG00000024218	SUB1	79	88.189	ENSPPAG00000011212	SUB1	100	90.551	Pan_paniscus
ENSCPBG00000024218	SUB1	79	87.402	ENSPPRG00000008557	SUB1	100	89.764	Panthera_pardus
ENSCPBG00000024218	SUB1	79	87.402	ENSPTIG00000009466	SUB1	100	89.764	Panthera_tigris_altaica
ENSCPBG00000024218	SUB1	79	88.189	ENSPTRG00000048895	SUB1	100	90.551	Pan_troglodytes
ENSCPBG00000024218	SUB1	79	81.890	ENSPTRG00000041644	-	100	85.039	Pan_troglodytes
ENSCPBG00000024218	SUB1	79	86.614	ENSPANG00000035601	-	100	83.465	Papio_anubis
ENSCPBG00000024218	SUB1	81	86.923	ENSPANG00000000339	-	99	89.231	Papio_anubis
ENSCPBG00000024218	SUB1	79	73.228	ENSPANG00000033272	-	90	73.228	Papio_anubis
ENSCPBG00000024218	SUB1	81	84.615	ENSPANG00000000672	-	93	86.923	Papio_anubis
ENSCPBG00000024218	SUB1	81	86.923	ENSPANG00000002644	-	97	89.231	Papio_anubis
ENSCPBG00000024218	SUB1	79	74.603	ENSPKIG00000016923	sub1b	100	73.810	Paramormyrops_kingsleyae
ENSCPBG00000024218	SUB1	79	99.206	ENSPSIG00000005731	SUB1	95	99.206	Pelodiscus_sinensis
ENSCPBG00000024218	SUB1	79	84.127	ENSPCIG00000020827	-	100	84.921	Phascolarctos_cinereus
ENSCPBG00000024218	SUB1	79	92.857	ENSPCIG00000020907	-	100	92.857	Phascolarctos_cinereus
ENSCPBG00000024218	SUB1	79	88.189	ENSPPYG00000015379	SUB1	100	90.551	Pongo_abelii
ENSCPBG00000024218	SUB1	79	82.677	ENSPPYG00000018347	-	100	85.827	Pongo_abelii
ENSCPBG00000024218	SUB1	79	88.189	ENSPCOG00000014391	SUB1	100	90.551	Propithecus_coquereli
ENSCPBG00000024218	SUB1	79	87.402	ENSPVAG00000004785	SUB1	100	89.764	Pteropus_vampyrus
ENSCPBG00000024218	SUB1	79	74.603	ENSPNYG00000010975	sub1b	100	73.810	Pundamilia_nyererei
ENSCPBG00000024218	SUB1	78	74.400	ENSPNAG00000005998	sub1b	99	73.600	Pygocentrus_nattereri
ENSCPBG00000024218	SUB1	79	73.228	ENSPNAG00000008693	sub1a	100	74.803	Pygocentrus_nattereri
ENSCPBG00000024218	SUB1	79	85.827	ENSRNOG00000050563	Sub1	100	88.189	Rattus_norvegicus
ENSCPBG00000024218	SUB1	79	82.677	ENSRBIG00000031233	SUB1	100	84.252	Rhinopithecus_bieti
ENSCPBG00000024218	SUB1	79	79.528	ENSRROG00000042718	-	91	79.528	Rhinopithecus_roxellana
ENSCPBG00000024218	SUB1	79	88.189	ENSRROG00000040438	SUB1	100	90.551	Rhinopithecus_roxellana
ENSCPBG00000024218	SUB1	79	88.189	ENSSBOG00000026994	SUB1	100	90.551	Saimiri_boliviensis_boliviensis
ENSCPBG00000024218	SUB1	79	92.857	ENSSHAG00000014986	SUB1	100	92.857	Sarcophilus_harrisii
ENSCPBG00000024218	SUB1	79	75.397	ENSSFOG00015017283	sub1b	100	73.016	Scleropages_formosus
ENSCPBG00000024218	SUB1	79	77.953	ENSSFOG00015018386	sub1b	100	77.953	Scleropages_formosus
ENSCPBG00000024218	SUB1	79	73.016	ENSSMAG00000000313	sub1b	100	72.222	Scophthalmus_maximus
ENSCPBG00000024218	SUB1	79	73.228	ENSSDUG00000013854	sub1b	76	77.778	Seriola_dumerili
ENSCPBG00000024218	SUB1	79	73.810	ENSSLDG00000000852	sub1b	100	73.016	Seriola_lalandi_dorsalis
ENSCPBG00000024218	SUB1	79	99.206	ENSSPUG00000016817	SUB1	100	99.206	Sphenodon_punctatus
ENSCPBG00000024218	SUB1	79	73.810	ENSSPAG00000019363	sub1b	100	73.016	Stegastes_partitus
ENSCPBG00000024218	SUB1	79	88.189	ENSSSCG00000032650	-	100	90.551	Sus_scrofa
ENSCPBG00000024218	SUB1	81	87.692	ENSSSCG00000040294	-	89	90.000	Sus_scrofa
ENSCPBG00000024218	SUB1	79	95.238	ENSTGUG00000001918	SUB1	100	95.238	Taeniopygia_guttata
ENSCPBG00000024218	SUB1	79	70.635	ENSTRUG00000024420	sub1b	100	72.222	Takifugu_rubripes
ENSCPBG00000024218	SUB1	79	71.429	ENSTNIG00000002700	sub1b	100	70.635	Tetraodon_nigroviridis
ENSCPBG00000024218	SUB1	79	81.250	ENSTBEG00000011247	-	100	83.594	Tupaia_belangeri
ENSCPBG00000024218	SUB1	79	86.614	ENSTBEG00000004053	-	100	88.976	Tupaia_belangeri
ENSCPBG00000024218	SUB1	79	82.677	ENSTBEG00000001790	-	100	85.039	Tupaia_belangeri
ENSCPBG00000024218	SUB1	78	80.159	ENSTBEG00000015821	-	100	82.540	Tupaia_belangeri
ENSCPBG00000024218	SUB1	79	86.614	ENSTBEG00000006504	-	100	88.976	Tupaia_belangeri
ENSCPBG00000024218	SUB1	79	82.677	ENSTBEG00000012861	-	100	85.039	Tupaia_belangeri
ENSCPBG00000024218	SUB1	63	87.255	ENSTTRG00000017324	SUB1	92	90.526	Tursiops_truncatus
ENSCPBG00000024218	SUB1	79	87.402	ENSUAMG00000000182	SUB1	100	89.764	Ursus_americanus
ENSCPBG00000024218	SUB1	79	87.402	ENSUMAG00000013792	SUB1	100	89.764	Ursus_maritimus
ENSCPBG00000024218	SUB1	79	81.746	ENSVPAG00000011012	SUB1	100	81.746	Vicugna_pacos
ENSCPBG00000024218	SUB1	70	77.876	ENSVVUG00000025193	-	92	82.727	Vulpes_vulpes
ENSCPBG00000024218	SUB1	79	87.402	ENSVVUG00000022166	-	100	89.764	Vulpes_vulpes
ENSCPBG00000024218	SUB1	79	83.594	ENSXETG00000027218	sub1	100	83.594	Xenopus_tropicalis