EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000024287 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5159 bases
Position: chrKK083163.1:437545-442703
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000034817	LSM	PF01423.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000040865	-	375	-	ENSCPBP00000034817	124 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000024287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000024287	-	60	89.189	ENSCPBG00000006227	-	99	87.059
ENSCPBG00000024287	-	54	76.119	ENSCPBG00000021923	-	84	76.119
ENSCPBG00000024287	-	52	49.231	ENSCPBG00000027472	LSM6	68	49.231
ENSCPBG00000024287	-	67	86.747	ENSCPBG00000001985	-	99	86.747
ENSCPBG00000024287	-	67	84.706	ENSCPBG00000026463	-	99	84.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024287	-	67	94.118	ENSG00000139343	SNRPF	99	94.118	Homo_sapiens
ENSCPBG00000024287	-	60	93.243	ENSAPOG00000003377	snrpf	66	91.765	Acanthochromis_polyacanthus
ENSCPBG00000024287	-	67	94.118	ENSAMEG00000002166	-	100	94.118	Ailuropoda_melanoleuca
ENSCPBG00000024287	-	60	84.000	ENSAMEG00000018718	-	99	84.706	Ailuropoda_melanoleuca
ENSCPBG00000024287	-	59	93.151	ENSACIG00000013216	snrpf	99	91.667	Amphilophus_citrinellus
ENSCPBG00000024287	-	59	93.151	ENSAOCG00000015108	snrpf	99	91.667	Amphiprion_ocellaris
ENSCPBG00000024287	-	59	93.151	ENSAPEG00000022022	snrpf	99	91.667	Amphiprion_percula
ENSCPBG00000024287	-	59	93.151	ENSATEG00000022625	snrpf	90	91.667	Anabas_testudineus
ENSCPBG00000024287	-	60	94.595	ENSACAG00000014073	SNRPF	98	92.941	Anolis_carolinensis
ENSCPBG00000024287	-	78	71.134	ENSANAG00000020297	-	95	72.222	Aotus_nancymaae
ENSCPBG00000024287	-	60	64.865	ENSANAG00000025860	-	99	65.882	Aotus_nancymaae
ENSCPBG00000024287	-	67	94.118	ENSANAG00000032845	SNRPF	99	94.118	Aotus_nancymaae
ENSCPBG00000024287	-	59	93.151	ENSACLG00000016066	snrpf	99	91.667	Astatotilapia_calliptera
ENSCPBG00000024287	-	60	90.541	ENSAMXG00000007421	snrpf	99	89.412	Astyanax_mexicanus
ENSCPBG00000024287	-	67	94.118	ENSBTAG00000016271	SNRPF	99	94.118	Bos_taurus
ENSCPBG00000024287	-	65	87.500	ENSBTAG00000050012	-	99	87.500	Bos_taurus
ENSCPBG00000024287	-	61	69.737	WBGene00004918	snr-5	89	69.737	Caenorhabditis_elegans
ENSCPBG00000024287	-	67	94.118	ENSCJAG00000002705	-	99	94.118	Callithrix_jacchus
ENSCPBG00000024287	-	80	82.178	ENSCAFG00000006395	-	91	82.178	Canis_familiaris
ENSCPBG00000024287	-	57	90.141	ENSCAFG00000031151	-	98	88.095	Canis_familiaris
ENSCPBG00000024287	-	57	90.141	ENSCAFG00020010823	-	98	88.095	Canis_lupus_dingo
ENSCPBG00000024287	-	58	90.278	ENSCAFG00020013161	-	77	90.278	Canis_lupus_dingo
ENSCPBG00000024287	-	65	86.420	ENSTSYG00000031636	-	68	86.420	Carlito_syrichta
ENSCPBG00000024287	-	60	82.432	ENSTSYG00000030635	-	99	82.353	Carlito_syrichta
ENSCPBG00000024287	-	60	89.333	ENSTSYG00000036502	-	99	88.372	Carlito_syrichta
ENSCPBG00000024287	-	67	94.118	ENSCAPG00000007242	SNRPF	100	94.118	Cavia_aperea
ENSCPBG00000024287	-	67	94.118	ENSCPOG00000013898	SNRPF	99	94.118	Cavia_porcellus
ENSCPBG00000024287	-	67	94.118	ENSCCAG00000017356	-	99	94.118	Cebus_capucinus
ENSCPBG00000024287	-	86	70.536	ENSCCAG00000033627	-	85	70.536	Cebus_capucinus
ENSCPBG00000024287	-	67	94.118	ENSCCAG00000037378	-	99	94.118	Cebus_capucinus
ENSCPBG00000024287	-	67	94.118	ENSCLAG00000007200	SNRPF	99	94.118	Chinchilla_lanigera
ENSCPBG00000024287	-	86	73.394	ENSCSAG00000003602	-	98	73.171	Chlorocebus_sabaeus
ENSCPBG00000024287	-	51	98.413	ENSCHOG00000009392	SNRPF	98	98.413	Choloepus_hoffmanni
ENSCPBG00000024287	-	68	83.721	ENSCSAVG00000007498	-	98	83.721	Ciona_savignyi
ENSCPBG00000024287	-	59	89.041	ENSCGRG00001008965	-	65	88.095	Cricetulus_griseus_chok1gshd
ENSCPBG00000024287	-	67	94.118	ENSCGRG00001017100	-	99	94.118	Cricetulus_griseus_chok1gshd
ENSCPBG00000024287	-	62	88.312	ENSCGRG00000018878	-	96	88.312	Cricetulus_griseus_crigri
ENSCPBG00000024287	-	67	94.118	ENSCGRG00000000336	-	99	94.118	Cricetulus_griseus_crigri
ENSCPBG00000024287	-	60	91.892	ENSCSEG00000004748	snrpf	99	90.588	Cynoglossus_semilaevis
ENSCPBG00000024287	-	64	91.139	ENSCVAG00000000397	snrpf	71	90.000	Cyprinodon_variegatus
ENSCPBG00000024287	-	60	90.789	ENSDARG00000105037	snrpf	99	89.655	Danio_rerio
ENSCPBG00000024287	-	73	82.222	ENSDNOG00000043775	-	65	82.178	Dasypus_novemcinctus
ENSCPBG00000024287	-	73	81.111	ENSDNOG00000048989	-	90	81.188	Dasypus_novemcinctus
ENSCPBG00000024287	-	60	81.081	ENSDNOG00000049373	-	74	78.824	Dasypus_novemcinctus
ENSCPBG00000024287	-	56	87.143	ENSDORG00000025351	-	97	87.143	Dipodomys_ordii
ENSCPBG00000024287	-	66	75.000	FBgn0000426	SmF	95	75.000	Drosophila_melanogaster
ENSCPBG00000024287	-	67	94.118	ENSETEG00000001558	-	99	94.118	Echinops_telfairi
ENSCPBG00000024287	-	64	74.684	ENSEBUG00000001793	-	85	74.684	Eptatretus_burgeri
ENSCPBG00000024287	-	81	76.238	ENSECAG00000019817	SNRPF	91	76.786	Equus_caballus
ENSCPBG00000024287	-	67	94.118	ENSEEUG00000013509	SNRPF	100	94.118	Erinaceus_europaeus
ENSCPBG00000024287	-	68	86.047	ENSELUG00000007737	RUXF	98	85.882	Esox_lucius
ENSCPBG00000024287	-	60	90.541	ENSELUG00000003121	RUXF	99	89.412	Esox_lucius
ENSCPBG00000024287	-	67	94.118	ENSFCAG00000029966	-	99	94.118	Felis_catus
ENSCPBG00000024287	-	74	67.021	ENSFCAG00000031148	-	76	73.494	Felis_catus
ENSCPBG00000024287	-	60	72.973	ENSFCAG00000021942	-	99	74.118	Felis_catus
ENSCPBG00000024287	-	67	94.118	ENSFALG00000010799	SNRPF	99	94.118	Ficedula_albicollis
ENSCPBG00000024287	-	67	94.118	ENSFDAG00000002831	-	99	94.118	Fukomys_damarensis
ENSCPBG00000024287	-	76	77.083	ENSFHEG00000003240	snrpf	93	77.570	Fundulus_heteroclitus
ENSCPBG00000024287	-	60	93.243	ENSGMOG00000007741	snrpf	100	91.765	Gadus_morhua
ENSCPBG00000024287	-	67	94.118	ENSGALG00000011409	SNRPF	99	94.118	Gallus_gallus
ENSCPBG00000024287	-	59	93.151	ENSGAFG00000016187	snrpf	97	91.667	Gambusia_affinis
ENSCPBG00000024287	-	60	91.892	ENSGACG00000020055	snrpf	100	90.588	Gasterosteus_aculeatus
ENSCPBG00000024287	-	58	94.444	ENSGAGG00000012945	-	76	91.566	Gopherus_agassizii
ENSCPBG00000024287	-	57	83.099	ENSGAGG00000014132	-	94	78.205	Gopherus_agassizii
ENSCPBG00000024287	-	62	90.909	ENSGAGG00000022991	-	89	90.909	Gopherus_agassizii
ENSCPBG00000024287	-	67	94.118	ENSGGOG00000001127	-	99	94.118	Gorilla_gorilla
ENSCPBG00000024287	-	63	70.513	ENSGGOG00000039564	-	95	70.513	Gorilla_gorilla
ENSCPBG00000024287	-	65	74.699	ENSGGOG00000039936	-	94	74.699	Gorilla_gorilla
ENSCPBG00000024287	-	67	94.118	ENSHGLG00000009108	SNRPF	99	94.118	Heterocephalus_glaber_female
ENSCPBG00000024287	-	60	94.595	ENSHGLG00000021172	-	99	92.941	Heterocephalus_glaber_female
ENSCPBG00000024287	-	67	94.118	ENSHGLG00100008103	-	100	94.118	Heterocephalus_glaber_male
ENSCPBG00000024287	-	60	94.595	ENSHGLG00100019596	-	99	92.941	Heterocephalus_glaber_male
ENSCPBG00000024287	-	57	76.923	ENSHCOG00000018663	snrpf	61	76.923	Hippocampus_comes
ENSCPBG00000024287	-	60	93.243	ENSIPUG00000018994	snrpf	99	91.765	Ictalurus_punctatus
ENSCPBG00000024287	-	67	94.118	ENSSTOG00000010434	-	99	94.118	Ictidomys_tridecemlineatus
ENSCPBG00000024287	-	67	79.518	ENSJJAG00000004558	-	99	79.518	Jaculus_jaculus
ENSCPBG00000024287	-	67	83.133	ENSJJAG00000010502	-	99	83.133	Jaculus_jaculus
ENSCPBG00000024287	-	52	93.846	ENSJJAG00000004828	-	100	93.846	Jaculus_jaculus
ENSCPBG00000024287	-	67	94.118	ENSJJAG00000011272	-	99	94.118	Jaculus_jaculus
ENSCPBG00000024287	-	59	93.151	ENSKMAG00000013566	snrpf	98	91.667	Kryptolebias_marmoratus
ENSCPBG00000024287	-	60	91.892	ENSLBEG00000008800	snrpf	99	90.588	Labrus_bergylta
ENSCPBG00000024287	-	67	94.118	ENSLACG00000002456	-	73	94.118	Latimeria_chalumnae
ENSCPBG00000024287	-	60	90.541	ENSLOCG00000015744	snrpf	99	89.412	Lepisosteus_oculatus
ENSCPBG00000024287	-	67	94.118	ENSLAFG00000017426	SNRPF	99	94.118	Loxodonta_africana
ENSCPBG00000024287	-	59	91.781	ENSMAMG00000016593	snrpf	99	90.476	Mastacembelus_armatus
ENSCPBG00000024287	-	59	93.151	ENSMZEG00005014701	snrpf	99	91.667	Maylandia_zebra
ENSCPBG00000024287	-	66	94.048	ENSMGAG00000011453	-	76	94.048	Meleagris_gallopavo
ENSCPBG00000024287	-	58	94.595	ENSMAUG00000016909	-	100	94.595	Mesocricetus_auratus
ENSCPBG00000024287	-	65	74.074	ENSMAUG00000010289	-	96	74.074	Mesocricetus_auratus
ENSCPBG00000024287	-	60	90.541	ENSMAUG00000008799	-	99	89.412	Mesocricetus_auratus
ENSCPBG00000024287	-	58	94.595	ENSMAUG00000019737	-	100	94.595	Mesocricetus_auratus
ENSCPBG00000024287	-	66	82.927	ENSMICG00000030494	-	89	73.214	Microcebus_murinus
ENSCPBG00000024287	-	67	94.118	ENSMICG00000012153	-	99	94.118	Microcebus_murinus
ENSCPBG00000024287	-	67	94.118	ENSMOCG00000020437	Snrpf	99	94.118	Microtus_ochrogaster
ENSCPBG00000024287	-	60	81.081	ENSMOCG00000022166	-	89	81.481	Microtus_ochrogaster
ENSCPBG00000024287	-	55	80.882	ENSMOCG00000020220	-	100	82.051	Microtus_ochrogaster
ENSCPBG00000024287	-	60	91.892	ENSMMOG00000007127	snrpf	100	90.588	Mola_mola
ENSCPBG00000024287	-	67	94.118	ENSMODG00000008091	SNRPF	75	94.118	Monodelphis_domestica
ENSCPBG00000024287	-	59	93.151	ENSMALG00000012328	snrpf	99	91.667	Monopterus_albus
ENSCPBG00000024287	-	67	94.118	MGP_CAROLIEiJ_G0015735	-	99	94.118	Mus_caroli
ENSCPBG00000024287	-	67	94.118	ENSMUSG00000020018	Snrpf	99	94.118	Mus_musculus
ENSCPBG00000024287	-	67	94.118	MGP_PahariEiJ_G0031350	Snrpf	99	94.118	Mus_pahari
ENSCPBG00000024287	-	67	94.118	MGP_SPRETEiJ_G0016553	Snrpf	99	94.118	Mus_spretus
ENSCPBG00000024287	-	85	77.273	ENSMPUG00000007176	-	98	77.273	Mustela_putorius_furo
ENSCPBG00000024287	-	74	81.522	ENSMLUG00000029201	-	96	82.353	Myotis_lucifugus
ENSCPBG00000024287	-	67	94.118	ENSMLUG00000013577	-	100	94.118	Myotis_lucifugus
ENSCPBG00000024287	-	74	81.522	ENSMLUG00000026149	-	96	82.353	Myotis_lucifugus
ENSCPBG00000024287	-	74	81.522	ENSMLUG00000027932	-	97	81.553	Myotis_lucifugus
ENSCPBG00000024287	-	67	76.471	ENSMLUG00000026269	-	80	76.471	Myotis_lucifugus
ENSCPBG00000024287	-	67	94.118	ENSNGAG00000024292	-	99	94.118	Nannospalax_galili
ENSCPBG00000024287	-	51	88.889	ENSNGAG00000005851	-	74	88.889	Nannospalax_galili
ENSCPBG00000024287	-	67	84.337	ENSNBRG00000011682	snrpf	91	88.764	Neolamprologus_brichardi
ENSCPBG00000024287	-	60	66.216	ENSMEUG00000000671	SNRPF	100	68.235	Notamacropus_eugenii
ENSCPBG00000024287	-	67	94.118	ENSODEG00000010328	-	99	94.118	Octodon_degus
ENSCPBG00000024287	-	85	78.378	ENSOCUG00000010925	SNRPF	98	78.378	Oryctolagus_cuniculus
ENSCPBG00000024287	-	60	90.541	ENSORLG00020008216	snrpf	100	89.412	Oryzias_latipes_hni
ENSCPBG00000024287	-	60	90.541	ENSORLG00015007418	snrpf	100	89.412	Oryzias_latipes_hsok
ENSCPBG00000024287	-	59	91.781	ENSOMEG00000003018	snrpf	99	90.476	Oryzias_melastigma
ENSCPBG00000024287	-	60	94.595	ENSOGAG00000030323	-	99	91.765	Otolemur_garnettii
ENSCPBG00000024287	-	67	94.118	ENSOARG00000011853	-	74	94.118	Ovis_aries
ENSCPBG00000024287	-	65	74.699	ENSPPAG00000037544	-	94	74.699	Pan_paniscus
ENSCPBG00000024287	-	63	70.513	ENSPPAG00000037479	-	95	70.513	Pan_paniscus
ENSCPBG00000024287	-	67	94.118	ENSPPRG00000005875	-	99	94.118	Panthera_pardus
ENSCPBG00000024287	-	65	72.289	ENSPPRG00000007449	-	85	72.289	Panthera_pardus
ENSCPBG00000024287	-	65	73.494	ENSPTIG00000005117	-	99	73.494	Panthera_tigris_altaica
ENSCPBG00000024287	-	67	94.118	ENSPTIG00000007520	SNRPF	99	94.118	Panthera_tigris_altaica
ENSCPBG00000024287	-	65	74.699	ENSPTRG00000043814	-	94	74.699	Pan_troglodytes
ENSCPBG00000024287	-	63	70.513	ENSPTRG00000047717	-	95	70.513	Pan_troglodytes
ENSCPBG00000024287	-	60	93.243	ENSPKIG00000014784	snrpf	93	91.765	Paramormyrops_kingsleyae
ENSCPBG00000024287	-	67	94.118	ENSPSIG00000016462	SNRPF	99	94.118	Pelodiscus_sinensis
ENSCPBG00000024287	-	60	91.892	ENSPMGG00000023548	snrpf	100	90.588	Periophthalmus_magnuspinnatus
ENSCPBG00000024287	-	67	94.118	ENSPEMG00000023326	Snrpf	99	94.118	Peromyscus_maniculatus_bairdii
ENSCPBG00000024287	-	59	93.151	ENSPLAG00000023932	snrpf	99	91.667	Poecilia_latipinna
ENSCPBG00000024287	-	59	93.151	ENSPMEG00000003377	snrpf	99	91.667	Poecilia_mexicana
ENSCPBG00000024287	-	59	93.151	ENSPREG00000022635	snrpf	97	91.667	Poecilia_reticulata
ENSCPBG00000024287	-	67	94.118	ENSPPYG00000004847	-	99	94.118	Pongo_abelii
ENSCPBG00000024287	-	67	94.118	ENSPCOG00000023833	-	99	94.118	Propithecus_coquereli
ENSCPBG00000024287	-	67	94.118	ENSPVAG00000009036	SNRPF	99	94.118	Pteropus_vampyrus
ENSCPBG00000024287	-	59	93.151	ENSPNYG00000021712	snrpf	99	91.667	Pundamilia_nyererei
ENSCPBG00000024287	-	59	91.781	ENSPNAG00000019117	snrpf	99	90.476	Pygocentrus_nattereri
ENSCPBG00000024287	-	67	94.118	ENSRNOG00000005556	Snrpf	99	94.118	Rattus_norvegicus
ENSCPBG00000024287	-	60	93.243	ENSRBIG00000030414	-	99	90.588	Rhinopithecus_bieti
ENSCPBG00000024287	-	60	93.243	ENSRROG00000021975	-	99	90.588	Rhinopithecus_roxellana
ENSCPBG00000024287	-	56	54.930	YPR182W	SMX3	83	54.930	Saccharomyces_cerevisiae
ENSCPBG00000024287	-	60	81.081	ENSSBOG00000032297	-	99	81.176	Saimiri_boliviensis_boliviensis
ENSCPBG00000024287	-	60	76.623	ENSSBOG00000027638	-	99	77.273	Saimiri_boliviensis_boliviensis
ENSCPBG00000024287	-	67	94.118	ENSSBOG00000036179	-	99	94.118	Saimiri_boliviensis_boliviensis
ENSCPBG00000024287	-	67	94.118	ENSSBOG00000012868	-	99	94.118	Saimiri_boliviensis_boliviensis
ENSCPBG00000024287	-	72	83.146	ENSSHAG00000012294	SNRPF	86	83.000	Sarcophilus_harrisii
ENSCPBG00000024287	-	52	93.846	ENSSFOG00015021523	snrpf	97	93.846	Scleropages_formosus
ENSCPBG00000024287	-	60	91.892	ENSSMAG00000005533	snrpf	98	90.588	Scophthalmus_maximus
ENSCPBG00000024287	-	60	81.250	ENSSDUG00000016283	snrpf	95	81.250	Seriola_dumerili
ENSCPBG00000024287	-	65	72.840	ENSSLDG00000003885	-	99	72.840	Seriola_lalandi_dorsalis
ENSCPBG00000024287	-	59	93.151	ENSSLDG00000005119	snrpf	98	91.667	Seriola_lalandi_dorsalis
ENSCPBG00000024287	-	66	94.048	ENSSPUG00000014590	-	99	94.048	Sphenodon_punctatus
ENSCPBG00000024287	-	60	92.000	ENSSPAG00000003283	snrpf	98	90.698	Stegastes_partitus
ENSCPBG00000024287	-	67	94.118	ENSSSCG00000000895	SNRPF	99	94.118	Sus_scrofa
ENSCPBG00000024287	-	60	91.892	ENSTNIG00000012672	snrpf	99	90.588	Tetraodon_nigroviridis
ENSCPBG00000024287	-	60	66.216	ENSTTRG00000006070	SNRPF	99	68.235	Tursiops_truncatus
ENSCPBG00000024287	-	67	94.118	ENSUAMG00000008176	-	99	94.118	Ursus_americanus
ENSCPBG00000024287	-	67	83.333	ENSUAMG00000001101	-	99	83.333	Ursus_americanus
ENSCPBG00000024287	-	60	85.135	ENSUMAG00000006177	-	99	82.143	Ursus_maritimus
ENSCPBG00000024287	-	67	94.118	ENSUMAG00000003528	-	99	94.118	Ursus_maritimus
ENSCPBG00000024287	-	67	94.118	ENSVPAG00000008712	-	99	94.118	Vicugna_pacos
ENSCPBG00000024287	-	62	88.312	ENSVVUG00000023821	-	99	88.312	Vulpes_vulpes
ENSCPBG00000024287	-	60	71.053	ENSXETG00000021630	snrpf	100	72.414	Xenopus_tropicalis
ENSCPBG00000024287	-	59	93.151	ENSXCOG00000013860	snrpf	97	91.667	Xiphophorus_couchianus
ENSCPBG00000024287	-	59	93.151	ENSXMAG00000015448	snrpf	99	91.667	Xiphophorus_maculatus