EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000024344 (Gene tree)
Gene ID: 101950550
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 51359 bases
Position: chrKK083004.1:3322397-3373755
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000034906	MIF4G_like	PF09088.11	6.7e-36	1	1
ENSCPBP00000034908	MIF4G_like	PF09088.11	8.1e-36	1	1
ENSCPBP00000034906	MIF4G_like_2	PF09090.11	1.4e-86	1	1
ENSCPBP00000034908	MIF4G_like_2	PF09090.11	5.4e-77	1	1
ENSCPBP00000034908	MIF4G	PF02854.19	1.7e-28	1	1
ENSCPBP00000034906	MIF4G	PF02854.19	4.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000040974	NCBP1-202	2815	-	ENSCPBP00000034908	754 (aa)	-	-
ENSCPBT00000040971	NCBP1-201	2967	-	ENSCPBP00000034906	728 (aa)	XP_005283558	UPI000388F157

Gene Model

Click here to download ENSCPBG00000024344's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG
cpic03015	mRNA surveillance pathway	KEGG
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024344	NCBP1	99	90.694	ENSG00000136937	NCBP1	100	86.164	Homo_sapiens
ENSCPBG00000024344	NCBP1	99	84.298	ENSAPOG00000008002	NCBP1	99	81.337	Acanthochromis_polyacanthus
ENSCPBG00000024344	NCBP1	99	90.694	ENSAMEG00000004763	NCBP1	100	85.947	Ailuropoda_melanoleuca
ENSCPBG00000024344	NCBP1	99	83.862	ENSACIG00000000274	NCBP1	99	81.761	Amphilophus_citrinellus
ENSCPBG00000024344	NCBP1	99	84.435	ENSAOCG00000021148	NCBP1	99	81.738	Amphiprion_ocellaris
ENSCPBG00000024344	NCBP1	99	84.435	ENSAPEG00000001701	NCBP1	99	81.738	Amphiprion_percula
ENSCPBG00000024344	NCBP1	99	83.884	ENSATEG00000006929	NCBP1	99	81.234	Anabas_testudineus
ENSCPBG00000024344	NCBP1	99	94.536	ENSAPLG00000016318	NCBP1	96	94.126	Anas_platyrhynchos
ENSCPBG00000024344	NCBP1	99	91.803	ENSACAG00000004409	NCBP1	87	88.015	Anolis_carolinensis
ENSCPBG00000024344	NCBP1	100	90.247	ENSANAG00000025744	NCBP1	100	90.110	Aotus_nancymaae
ENSCPBG00000024344	NCBP1	99	83.747	ENSACLG00000014812	NCBP1	99	82.964	Astatotilapia_calliptera
ENSCPBG00000024344	NCBP1	99	83.356	ENSAMXG00000016364	NCBP1	99	81.407	Astyanax_mexicanus
ENSCPBG00000024344	NCBP1	99	90.278	ENSBTAG00000009732	NCBP1	99	92.749	Bos_taurus
ENSCPBG00000024344	NCBP1	99	34.539	WBGene00018156	ncbp-1	99	34.457	Caenorhabditis_elegans
ENSCPBG00000024344	NCBP1	100	90.385	ENSCJAG00000010840	NCBP1	100	90.749	Callithrix_jacchus
ENSCPBG00000024344	NCBP1	99	90.694	ENSCAFG00000002445	NCBP1	100	86.164	Canis_familiaris
ENSCPBG00000024344	NCBP1	100	90.385	ENSCAFG00020017997	NCBP1	100	90.262	Canis_lupus_dingo
ENSCPBG00000024344	NCBP1	99	90.000	ENSCHIG00000020139	NCBP1	100	85.535	Capra_hircus
ENSCPBG00000024344	NCBP1	55	91.019	ENSTSYG00000011914	NCBP1	98	93.417	Carlito_syrichta
ENSCPBG00000024344	NCBP1	89	81.269	ENSCAPG00000014252	NCBP1	91	81.269	Cavia_aperea
ENSCPBG00000024344	NCBP1	99	90.417	ENSCPOG00000012573	NCBP1	99	85.752	Cavia_porcellus
ENSCPBG00000024344	NCBP1	99	90.694	ENSCCAG00000032297	NCBP1	100	86.164	Cebus_capucinus
ENSCPBG00000024344	NCBP1	99	90.694	ENSCATG00000010052	NCBP1	99	90.523	Cercocebus_atys
ENSCPBG00000024344	NCBP1	99	90.694	ENSCLAG00000014339	NCBP1	100	86.289	Chinchilla_lanigera
ENSCPBG00000024344	NCBP1	99	90.694	ENSCSAG00000010929	NCBP1	100	86.164	Chlorocebus_sabaeus
ENSCPBG00000024344	NCBP1	89	89.720	ENSCHOG00000010332	NCBP1	90	89.720	Choloepus_hoffmanni
ENSCPBG00000024344	NCBP1	99	53.729	ENSCING00000008990	-	99	53.350	Ciona_intestinalis
ENSCPBG00000024344	NCBP1	99	53.074	ENSCSAVG00000005300	-	99	54.124	Ciona_savignyi
ENSCPBG00000024344	NCBP1	100	90.385	ENSCANG00000036913	NCBP1	100	90.247	Colobus_angolensis_palliatus
ENSCPBG00000024344	NCBP1	99	90.139	ENSCGRG00001015771	Ncbp1	100	85.660	Cricetulus_griseus_chok1gshd
ENSCPBG00000024344	NCBP1	99	90.139	ENSCGRG00000010311	Ncbp1	100	85.605	Cricetulus_griseus_crigri
ENSCPBG00000024344	NCBP1	99	83.884	ENSCSEG00000012377	NCBP1	99	83.310	Cynoglossus_semilaevis
ENSCPBG00000024344	NCBP1	99	81.818	ENSCVAG00000008795	NCBP1	99	80.881	Cyprinodon_variegatus
ENSCPBG00000024344	NCBP1	99	89.722	ENSDNOG00000006885	NCBP1	100	89.244	Dasypus_novemcinctus
ENSCPBG00000024344	NCBP1	99	90.014	ENSDORG00000013652	Ncbp1	92	89.875	Dipodomys_ordii
ENSCPBG00000024344	NCBP1	82	32.635	FBgn0038887	CG7907	87	32.635	Drosophila_melanogaster
ENSCPBG00000024344	NCBP1	100	56.375	FBgn0022942	Cbp80	100	56.375	Drosophila_melanogaster
ENSCPBG00000024344	NCBP1	87	84.449	ENSETEG00000009705	NCBP1	89	78.186	Echinops_telfairi
ENSCPBG00000024344	NCBP1	99	73.416	ENSEBUG00000008386	NCBP1	100	71.985	Eptatretus_burgeri
ENSCPBG00000024344	NCBP1	99	90.139	ENSEASG00005022795	NCBP1	100	85.660	Equus_asinus_asinus
ENSCPBG00000024344	NCBP1	99	90.278	ENSECAG00000013847	NCBP1	100	85.786	Equus_caballus
ENSCPBG00000024344	NCBP1	94	84.627	ENSEEUG00000015973	NCBP1	99	80.871	Erinaceus_europaeus
ENSCPBG00000024344	NCBP1	99	82.231	ENSELUG00000022519	NCBP1	99	80.755	Esox_lucius
ENSCPBG00000024344	NCBP1	99	90.556	ENSFCAG00000001206	NCBP1	100	86.038	Felis_catus
ENSCPBG00000024344	NCBP1	99	95.199	ENSFALG00000001193	NCBP1	100	91.221	Ficedula_albicollis
ENSCPBG00000024344	NCBP1	99	90.556	ENSFDAG00000010864	NCBP1	100	86.164	Fukomys_damarensis
ENSCPBG00000024344	NCBP1	99	83.196	ENSFHEG00000000655	NCBP1	99	81.132	Fundulus_heteroclitus
ENSCPBG00000024344	NCBP1	99	81.405	ENSGMOG00000008653	NCBP1	99	79.748	Gadus_morhua
ENSCPBG00000024344	NCBP1	99	95.179	ENSGALG00000002087	NCBP1	100	90.213	Gallus_gallus
ENSCPBG00000024344	NCBP1	99	83.333	ENSGAFG00000017787	NCBP1	99	81.258	Gambusia_affinis
ENSCPBG00000024344	NCBP1	99	81.706	ENSGACG00000016772	NCBP1	98	79.548	Gasterosteus_aculeatus
ENSCPBG00000024344	NCBP1	100	99.451	ENSGAGG00000019483	NCBP1	100	99.451	Gopherus_agassizii
ENSCPBG00000024344	NCBP1	100	90.247	ENSGGOG00000001376	NCBP1	100	90.110	Gorilla_gorilla
ENSCPBG00000024344	NCBP1	99	83.747	ENSHBUG00000020843	NCBP1	99	81.360	Haplochromis_burtoni
ENSCPBG00000024344	NCBP1	99	90.556	ENSHGLG00000001882	NCBP1	100	86.164	Heterocephalus_glaber_female
ENSCPBG00000024344	NCBP1	99	78.532	ENSHGLG00000018112	-	100	74.906	Heterocephalus_glaber_female
ENSCPBG00000024344	NCBP1	99	90.556	ENSHGLG00100013014	NCBP1	100	86.164	Heterocephalus_glaber_male
ENSCPBG00000024344	NCBP1	99	78.255	ENSHGLG00100017373	-	100	74.655	Heterocephalus_glaber_male
ENSCPBG00000024344	NCBP1	84	74.513	ENSHCOG00000000204	NCBP1	91	74.513	Hippocampus_comes
ENSCPBG00000024344	NCBP1	99	82.920	ENSIPUG00000007275	ncbp1	99	81.006	Ictalurus_punctatus
ENSCPBG00000024344	NCBP1	99	90.972	ENSSTOG00000002695	NCBP1	100	86.415	Ictidomys_tridecemlineatus
ENSCPBG00000024344	NCBP1	99	83.196	ENSKMAG00000003594	NCBP1	99	87.780	Kryptolebias_marmoratus
ENSCPBG00000024344	NCBP1	99	81.818	ENSLBEG00000011661	NCBP1	99	79.379	Labrus_bergylta
ENSCPBG00000024344	NCBP1	99	81.719	ENSLACG00000013955	NCBP1	100	78.483	Latimeria_chalumnae
ENSCPBG00000024344	NCBP1	99	71.662	ENSLOCG00000009579	NCBP1	99	70.735	Lepisosteus_oculatus
ENSCPBG00000024344	NCBP1	99	90.278	ENSLAFG00000005999	NCBP1	100	85.786	Loxodonta_africana
ENSCPBG00000024344	NCBP1	99	90.694	ENSMFAG00000030994	NCBP1	99	90.523	Macaca_fascicularis
ENSCPBG00000024344	NCBP1	99	90.694	ENSMMUG00000012281	NCBP1	99	90.523	Macaca_mulatta
ENSCPBG00000024344	NCBP1	99	90.694	ENSMNEG00000042790	NCBP1	100	86.164	Macaca_nemestrina
ENSCPBG00000024344	NCBP1	100	90.247	ENSMLEG00000030374	NCBP1	100	90.110	Mandrillus_leucophaeus
ENSCPBG00000024344	NCBP1	99	83.884	ENSMAMG00000014806	NCBP1	99	81.108	Mastacembelus_armatus
ENSCPBG00000024344	NCBP1	99	83.747	ENSMZEG00005003469	NCBP1	99	81.360	Maylandia_zebra
ENSCPBG00000024344	NCBP1	99	82.207	ENSMZEG00005009290	-	99	81.064	Maylandia_zebra
ENSCPBG00000024344	NCBP1	99	90.139	ENSMAUG00000020583	Ncbp1	99	85.082	Mesocricetus_auratus
ENSCPBG00000024344	NCBP1	99	90.139	ENSMICG00000012682	NCBP1	100	85.660	Microcebus_murinus
ENSCPBG00000024344	NCBP1	99	89.861	ENSMOCG00000015818	Ncbp1	100	85.409	Microtus_ochrogaster
ENSCPBG00000024344	NCBP1	99	82.197	ENSMMOG00000002610	NCBP1	99	82.222	Mola_mola
ENSCPBG00000024344	NCBP1	99	89.532	ENSMODG00000003202	NCBP1	99	85.535	Monodelphis_domestica
ENSCPBG00000024344	NCBP1	99	83.196	ENSMALG00000003547	NCBP1	99	80.982	Monopterus_albus
ENSCPBG00000024344	NCBP1	99	90.000	MGP_CAROLIEiJ_G0025982	Ncbp1	100	85.535	Mus_caroli
ENSCPBG00000024344	NCBP1	99	90.000	ENSMUSG00000028330	Ncbp1	100	85.535	Mus_musculus
ENSCPBG00000024344	NCBP1	99	90.278	MGP_PahariEiJ_G0028318	Ncbp1	100	85.786	Mus_pahari
ENSCPBG00000024344	NCBP1	99	90.000	MGP_SPRETEiJ_G0026945	Ncbp1	100	85.535	Mus_spretus
ENSCPBG00000024344	NCBP1	99	90.556	ENSMPUG00000006399	NCBP1	100	86.164	Mustela_putorius_furo
ENSCPBG00000024344	NCBP1	99	90.000	ENSMLUG00000015201	NCBP1	100	85.077	Myotis_lucifugus
ENSCPBG00000024344	NCBP1	99	90.139	ENSNGAG00000014101	Ncbp1	100	85.535	Nannospalax_galili
ENSCPBG00000024344	NCBP1	76	90.749	ENSNBRG00000014674	NCBP1	98	90.749	Neolamprologus_brichardi
ENSCPBG00000024344	NCBP1	100	90.247	ENSNLEG00000016909	NCBP1	100	90.110	Nomascus_leucogenys
ENSCPBG00000024344	NCBP1	94	88.106	ENSMEUG00000010672	NCBP1	90	86.430	Notamacropus_eugenii
ENSCPBG00000024344	NCBP1	82	83.529	ENSOPRG00000002144	-	88	78.151	Ochotona_princeps
ENSCPBG00000024344	NCBP1	99	90.556	ENSODEG00000003232	NCBP1	100	86.164	Octodon_degus
ENSCPBG00000024344	NCBP1	99	83.471	ENSONIG00000001502	NCBP1	99	81.360	Oreochromis_niloticus
ENSCPBG00000024344	NCBP1	78	91.504	ENSOANG00000001918	NCBP1	100	87.801	Ornithorhynchus_anatinus
ENSCPBG00000024344	NCBP1	97	90.469	ENSOCUG00000013853	NCBP1	97	85.513	Oryctolagus_cuniculus
ENSCPBG00000024344	NCBP1	99	82.329	ENSORLG00000011008	NCBP1	98	82.749	Oryzias_latipes
ENSCPBG00000024344	NCBP1	99	82.466	ENSORLG00020017455	NCBP1	99	79.825	Oryzias_latipes_hni
ENSCPBG00000024344	NCBP1	99	82.466	ENSORLG00015012127	NCBP1	99	79.825	Oryzias_latipes_hsok
ENSCPBG00000024344	NCBP1	99	82.740	ENSOMEG00000020698	NCBP1	99	80.702	Oryzias_melastigma
ENSCPBG00000024344	NCBP1	99	90.833	ENSOGAG00000013888	NCBP1	100	86.073	Otolemur_garnettii
ENSCPBG00000024344	NCBP1	99	90.000	ENSOARG00000011233	NCBP1	100	85.535	Ovis_aries
ENSCPBG00000024344	NCBP1	100	90.247	ENSPPAG00000026462	NCBP1	100	90.110	Pan_paniscus
ENSCPBG00000024344	NCBP1	99	90.694	ENSPPRG00000022574	NCBP1	100	86.164	Panthera_pardus
ENSCPBG00000024344	NCBP1	99	90.694	ENSPTIG00000018507	NCBP1	100	86.164	Panthera_tigris_altaica
ENSCPBG00000024344	NCBP1	99	90.694	ENSPTRG00000021167	NCBP1	100	86.164	Pan_troglodytes
ENSCPBG00000024344	NCBP1	100	90.247	ENSPANG00000025591	NCBP1	100	90.110	Papio_anubis
ENSCPBG00000024344	NCBP1	99	81.680	ENSPKIG00000015861	NCBP1	100	79.975	Paramormyrops_kingsleyae
ENSCPBG00000024344	NCBP1	70	98.438	ENSPSIG00000009558	NCBP1	100	98.438	Pelodiscus_sinensis
ENSCPBG00000024344	NCBP1	99	78.571	ENSPMGG00000020476	NCBP1	99	77.068	Periophthalmus_magnuspinnatus
ENSCPBG00000024344	NCBP1	99	89.861	ENSPEMG00000020105	Ncbp1	100	85.157	Peromyscus_maniculatus_bairdii
ENSCPBG00000024344	NCBP1	92	80.435	ENSPMAG00000005533	NCBP1	100	67.459	Petromyzon_marinus
ENSCPBG00000024344	NCBP1	99	89.256	ENSPCIG00000015800	NCBP1	99	88.546	Phascolarctos_cinereus
ENSCPBG00000024344	NCBP1	99	82.990	ENSPFOG00000004158	NCBP1	99	80.702	Poecilia_formosa
ENSCPBG00000024344	NCBP1	99	83.333	ENSPLAG00000020002	NCBP1	99	81.258	Poecilia_latipinna
ENSCPBG00000024344	NCBP1	99	83.333	ENSPMEG00000019821	NCBP1	99	81.258	Poecilia_mexicana
ENSCPBG00000024344	NCBP1	99	83.219	ENSPREG00000006035	NCBP1	99	80.905	Poecilia_reticulata
ENSCPBG00000024344	NCBP1	99	90.694	ENSPPYG00000019426	NCBP1	100	86.164	Pongo_abelii
ENSCPBG00000024344	NCBP1	88	95.703	ENSPCAG00000009943	NCBP1	90	86.707	Procavia_capensis
ENSCPBG00000024344	NCBP1	89	93.421	ENSPCOG00000020024	NCBP1	98	93.421	Propithecus_coquereli
ENSCPBG00000024344	NCBP1	99	90.139	ENSPVAG00000005924	NCBP1	100	85.660	Pteropus_vampyrus
ENSCPBG00000024344	NCBP1	99	82.940	ENSPNYG00000002140	NCBP1	99	82.964	Pundamilia_nyererei
ENSCPBG00000024344	NCBP1	99	83.356	ENSPNAG00000027753	NCBP1	99	82.967	Pygocentrus_nattereri
ENSCPBG00000024344	NCBP1	99	90.139	ENSRNOG00000023605	Ncbp1	100	85.660	Rattus_norvegicus
ENSCPBG00000024344	NCBP1	99	90.694	ENSRBIG00000043175	NCBP1	99	90.523	Rhinopithecus_bieti
ENSCPBG00000024344	NCBP1	100	90.247	ENSRROG00000029767	NCBP1	100	90.110	Rhinopithecus_roxellana
ENSCPBG00000024344	NCBP1	99	90.694	ENSSBOG00000019378	NCBP1	96	93.035	Saimiri_boliviensis_boliviensis
ENSCPBG00000024344	NCBP1	78	81.017	ENSSHAG00000015882	NCBP1	77	80.678	Sarcophilus_harrisii
ENSCPBG00000024344	NCBP1	99	81.543	ENSSFOG00015001872	NCBP1	100	78.841	Scleropages_formosus
ENSCPBG00000024344	NCBP1	99	82.645	ENSSMAG00000007463	NCBP1	99	79.849	Scophthalmus_maximus
ENSCPBG00000024344	NCBP1	99	83.172	ENSSDUG00000007019	NCBP1	100	80.796	Seriola_dumerili
ENSCPBG00000024344	NCBP1	99	83.747	ENSSLDG00000021924	NCBP1	99	81.108	Seriola_lalandi_dorsalis
ENSCPBG00000024344	NCBP1	77	91.000	ENSSARG00000007274	NCBP1	72	91.000	Sorex_araneus
ENSCPBG00000024344	NCBP1	99	84.986	ENSSPUG00000008609	NCBP1	100	81.761	Sphenodon_punctatus
ENSCPBG00000024344	NCBP1	99	84.435	ENSSPAG00000012550	NCBP1	99	81.612	Stegastes_partitus
ENSCPBG00000024344	NCBP1	99	90.417	ENSSSCG00000005366	NCBP1	100	86.038	Sus_scrofa
ENSCPBG00000024344	NCBP1	99	89.394	ENSTGUG00000001472	NCBP1	100	85.660	Taeniopygia_guttata
ENSCPBG00000024344	NCBP1	99	83.058	ENSTRUG00000005287	NCBP1	99	80.101	Takifugu_rubripes
ENSCPBG00000024344	NCBP1	99	87.361	ENSTBEG00000004035	NCBP1	100	83.145	Tupaia_belangeri
ENSCPBG00000024344	NCBP1	86	93.750	ENSTTRG00000000507	NCBP1	88	90.148	Tursiops_truncatus
ENSCPBG00000024344	NCBP1	99	90.556	ENSUAMG00000005471	NCBP1	100	86.038	Ursus_americanus
ENSCPBG00000024344	NCBP1	100	87.671	ENSUMAG00000011865	NCBP1	100	90.262	Ursus_maritimus
ENSCPBG00000024344	NCBP1	99	90.556	ENSVPAG00000010537	NCBP1	100	82.138	Vicugna_pacos
ENSCPBG00000024344	NCBP1	99	90.694	ENSVVUG00000019725	NCBP1	100	86.164	Vulpes_vulpes
ENSCPBG00000024344	NCBP1	99	82.507	ENSXETG00000010179	ncbp1	100	79.623	Xenopus_tropicalis
ENSCPBG00000024344	NCBP1	99	83.196	ENSXMAG00000018253	NCBP1	99	81.132	Xiphophorus_maculatus