EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000024454 (Gene tree)
Gene ID: 101934154
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 23515 bases
Position: chrKK083124.1:899569-923083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000035087	RRM_1	PF00076.22	1e-13	1	1
ENSCPBP00000035086	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000041166	-	4335	XM_008174442	ENSCPBP00000035087	682 (aa)	XP_008172664	UPI00046BFC17
ENSCPBT00000041165	-	5052	-	ENSCPBP00000035086	755 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000024454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024454	-	76	33.333	ENSAPOG00000005058	si:dkey-33c12.4	82	33.095	Acanthochromis_polyacanthus
ENSCPBG00000024454	-	52	31.250	ENSAPOG00000022403	-	74	30.595	Acanthochromis_polyacanthus
ENSCPBG00000024454	-	61	32.184	ENSAPOG00000019633	zgc:123010	58	33.146	Acanthochromis_polyacanthus
ENSCPBG00000024454	-	51	31.805	ENSAPOG00000001034	-	67	31.672	Acanthochromis_polyacanthus
ENSCPBG00000024454	-	59	33.088	ENSACIG00000021684	zgc:123010	78	33.425	Amphilophus_citrinellus
ENSCPBG00000024454	-	52	31.910	ENSAOCG00000000431	-	58	33.938	Amphiprion_ocellaris
ENSCPBG00000024454	-	55	36.250	ENSAOCG00000020066	si:dkey-33c12.4	81	32.218	Amphiprion_ocellaris
ENSCPBG00000024454	-	61	32.184	ENSAOCG00000005910	zgc:123010	58	33.146	Amphiprion_ocellaris
ENSCPBG00000024454	-	52	30.846	ENSAPEG00000023603	-	58	34.103	Amphiprion_percula
ENSCPBG00000024454	-	61	32.184	ENSAPEG00000014305	zgc:123010	62	33.146	Amphiprion_percula
ENSCPBG00000024454	-	61	32.251	ENSATEG00000001220	zgc:123010	58	33.146	Anabas_testudineus
ENSCPBG00000024454	-	50	33.244	ENSATEG00000018302	-	57	33.973	Anabas_testudineus
ENSCPBG00000024454	-	62	33.186	ENSATEG00000018885	si:dkey-33c12.4	83	32.727	Anabas_testudineus
ENSCPBG00000024454	-	50	35.027	ENSACLG00000014192	si:dkey-33c12.4	88	31.624	Astatotilapia_calliptera
ENSCPBG00000024454	-	61	32.558	ENSACLG00000010188	zgc:123010	62	32.880	Astatotilapia_calliptera
ENSCPBG00000024454	-	59	32.530	ENSACLG00000012346	-	69	32.518	Astatotilapia_calliptera
ENSCPBG00000024454	-	82	34.375	ENSAMXG00000010871	si:dkey-33c12.4	90	34.725	Astyanax_mexicanus
ENSCPBG00000024454	-	70	30.314	ENSCSEG00000002755	-	71	32.212	Cynoglossus_semilaevis
ENSCPBG00000024454	-	61	33.333	ENSCVAG00000013288	zgc:123010	61	33.607	Cyprinodon_variegatus
ENSCPBG00000024454	-	50	34.704	ENSCVAG00000004187	-	62	33.770	Cyprinodon_variegatus
ENSCPBG00000024454	-	50	36.769	ENSCVAG00000006564	-	53	36.975	Cyprinodon_variegatus
ENSCPBG00000024454	-	82	34.596	ENSDARG00000057890	si:dkey-33c12.4	87	34.237	Danio_rerio
ENSCPBG00000024454	-	58	32.000	ENSEBUG00000001368	-	56	34.463	Eptatretus_burgeri
ENSCPBG00000024454	-	82	33.333	ENSELUG00000001633	-	90	30.413	Esox_lucius
ENSCPBG00000024454	-	59	31.873	ENSELUG00000022008	zgc:123010	75	39.157	Esox_lucius
ENSCPBG00000024454	-	59	32.439	ENSELUG00000021447	-	69	31.095	Esox_lucius
ENSCPBG00000024454	-	84	34.202	ENSELUG00000002009	si:dkey-33c12.4	88	36.443	Esox_lucius
ENSCPBG00000024454	-	63	32.346	ENSFHEG00000002306	zgc:123010	58	33.427	Fundulus_heteroclitus
ENSCPBG00000024454	-	55	34.606	ENSFHEG00000005521	si:dkey-33c12.4	60	33.842	Fundulus_heteroclitus
ENSCPBG00000024454	-	59	31.873	ENSGMOG00000018473	zgc:123010	81	33.148	Gadus_morhua
ENSCPBG00000024454	-	68	50.518	ENSGALG00000036747	TTC31	85	49.793	Gallus_gallus
ENSCPBG00000024454	-	60	31.667	ENSGAFG00000009373	zgc:123010	57	37.725	Gambusia_affinis
ENSCPBG00000024454	-	50	34.521	ENSGAFG00000017596	si:dkey-33c12.4	53	35.598	Gambusia_affinis
ENSCPBG00000024454	-	54	34.232	ENSGACG00000004936	-	97	34.232	Gasterosteus_aculeatus
ENSCPBG00000024454	-	62	31.797	ENSGACG00000007620	zgc:123010	81	32.486	Gasterosteus_aculeatus
ENSCPBG00000024454	-	59	32.530	ENSHBUG00000016720	-	69	32.518	Haplochromis_burtoni
ENSCPBG00000024454	-	50	35.121	ENSHBUG00000010735	si:dkey-33c12.4	85	32.241	Haplochromis_burtoni
ENSCPBG00000024454	-	81	34.179	ENSIPUG00000005998	si:dkey-33c12.4	91	33.225	Ictalurus_punctatus
ENSCPBG00000024454	-	60	33.810	ENSKMAG00000021350	zgc:123010	60	33.795	Kryptolebias_marmoratus
ENSCPBG00000024454	-	50	35.593	ENSKMAG00000016610	si:dkey-33c12.4	83	31.273	Kryptolebias_marmoratus
ENSCPBG00000024454	-	52	31.186	ENSKMAG00000006468	-	61	31.117	Kryptolebias_marmoratus
ENSCPBG00000024454	-	52	34.293	ENSLBEG00000017203	-	84	31.915	Labrus_bergylta
ENSCPBG00000024454	-	59	32.936	ENSLBEG00000013518	-	69	32.603	Labrus_bergylta
ENSCPBG00000024454	-	55	34.761	ENSLBEG00000021088	-	83	32.570	Labrus_bergylta
ENSCPBG00000024454	-	67	32.596	ENSLBEG00000028046	-	70	31.072	Labrus_bergylta
ENSCPBG00000024454	-	60	33.962	ENSLBEG00000023984	zgc:123010	59	34.831	Labrus_bergylta
ENSCPBG00000024454	-	87	39.520	ENSLACG00000004602	-	92	40.761	Latimeria_chalumnae
ENSCPBG00000024454	-	53	38.197	ENSLACG00000009001	zgc:123010	74	39.500	Latimeria_chalumnae
ENSCPBG00000024454	-	81	38.542	ENSLOCG00000001861	-	87	38.047	Lepisosteus_oculatus
ENSCPBG00000024454	-	59	31.742	ENSLOCG00000008967	zgc:123010	60	32.676	Lepisosteus_oculatus
ENSCPBG00000024454	-	50	35.311	ENSMAMG00000000111	si:dkey-33c12.4	57	34.726	Mastacembelus_armatus
ENSCPBG00000024454	-	70	31.528	ENSMAMG00000004311	-	71	31.735	Mastacembelus_armatus
ENSCPBG00000024454	-	59	30.542	ENSMAMG00000002460	-	89	39.310	Mastacembelus_armatus
ENSCPBG00000024454	-	59	32.536	ENSMZEG00005014740	-	88	32.524	Maylandia_zebra
ENSCPBG00000024454	-	50	32.987	ENSMZEG00005000585	-	62	33.684	Maylandia_zebra
ENSCPBG00000024454	-	61	32.558	ENSMZEG00005027733	zgc:123010	62	32.880	Maylandia_zebra
ENSCPBG00000024454	-	50	35.027	ENSMZEG00005014276	si:dkey-33c12.4	85	32.014	Maylandia_zebra
ENSCPBG00000024454	-	50	36.158	ENSMALG00000002265	si:dkey-33c12.4	84	32.240	Monopterus_albus
ENSCPBG00000024454	-	61	32.019	ENSMALG00000017698	zgc:123010	59	33.708	Monopterus_albus
ENSCPBG00000024454	-	50	33.858	ENSMALG00000003167	-	57	33.777	Monopterus_albus
ENSCPBG00000024454	-	62	38.732	ENSNBRG00000021157	zgc:123010	63	43.902	Neolamprologus_brichardi
ENSCPBG00000024454	-	63	31.293	ENSONIG00000018353	zgc:123010	71	30.583	Oreochromis_niloticus
ENSCPBG00000024454	-	50	34.870	ENSONIG00000012263	-	92	34.870	Oreochromis_niloticus
ENSCPBG00000024454	-	65	35.076	ENSORLG00000029651	si:dkey-33c12.4	58	38.441	Oryzias_latipes
ENSCPBG00000024454	-	56	31.332	ENSORLG00000007675	zgc:123010	63	32.102	Oryzias_latipes
ENSCPBG00000024454	-	56	31.070	ENSORLG00020003457	zgc:123010	55	33.115	Oryzias_latipes_hni
ENSCPBG00000024454	-	65	34.716	ENSORLG00020008750	si:dkey-33c12.4	54	38.172	Oryzias_latipes_hni
ENSCPBG00000024454	-	61	32.629	ENSORLG00015008373	zgc:123010	67	32.840	Oryzias_latipes_hsok
ENSCPBG00000024454	-	50	33.607	ENSORLG00015008400	-	57	33.795	Oryzias_latipes_hsok
ENSCPBG00000024454	-	54	37.466	ENSOMEG00000008913	-	55	37.568	Oryzias_melastigma
ENSCPBG00000024454	-	59	33.414	ENSOMEG00000003408	zgc:123010	67	33.086	Oryzias_melastigma
ENSCPBG00000024454	-	67	31.176	ENSOMEG00000009428	-	66	31.377	Oryzias_melastigma
ENSCPBG00000024454	-	82	36.254	ENSPKIG00000011819	-	85	35.690	Paramormyrops_kingsleyae
ENSCPBG00000024454	-	58	31.750	ENSPKIG00000015521	zgc:123010	68	32.320	Paramormyrops_kingsleyae
ENSCPBG00000024454	-	54	35.171	ENSPFOG00000017092	-	76	34.840	Poecilia_formosa
ENSCPBG00000024454	-	50	35.655	ENSPFOG00000009143	si:dkey-33c12.4	53	35.933	Poecilia_formosa
ENSCPBG00000024454	-	60	31.905	ENSPFOG00000001073	zgc:123010	59	32.584	Poecilia_formosa
ENSCPBG00000024454	-	60	31.905	ENSPLAG00000007711	zgc:123010	59	32.584	Poecilia_latipinna
ENSCPBG00000024454	-	50	35.655	ENSPLAG00000022537	si:dkey-33c12.4	54	35.933	Poecilia_latipinna
ENSCPBG00000024454	-	50	35.655	ENSPMEG00000015590	si:dkey-33c12.4	53	35.655	Poecilia_mexicana
ENSCPBG00000024454	-	66	30.819	ENSPMEG00000005092	zgc:123010	59	32.584	Poecilia_mexicana
ENSCPBG00000024454	-	52	32.367	ENSPMEG00000009905	-	64	31.829	Poecilia_mexicana
ENSCPBG00000024454	-	50	33.668	ENSPREG00000016861	-	62	33.333	Poecilia_reticulata
ENSCPBG00000024454	-	50	35.027	ENSPNYG00000018262	si:dkey-33c12.4	85	32.014	Pundamilia_nyererei
ENSCPBG00000024454	-	50	32.987	ENSPNYG00000001047	-	62	33.684	Pundamilia_nyererei
ENSCPBG00000024454	-	59	32.446	ENSPNYG00000023304	-	84	32.187	Pundamilia_nyererei
ENSCPBG00000024454	-	61	32.791	ENSPNYG00000007893	zgc:123010	60	33.427	Pundamilia_nyererei
ENSCPBG00000024454	-	81	34.441	ENSPNAG00000018386	si:dkey-33c12.4	86	33.972	Pygocentrus_nattereri
ENSCPBG00000024454	-	76	32.428	ENSSFOG00015009199	-	90	30.782	Scleropages_formosus
ENSCPBG00000024454	-	81	33.451	ENSSFOG00015005186	-	91	33.558	Scleropages_formosus
ENSCPBG00000024454	-	51	33.085	ENSSMAG00000010960	-	59	33.508	Scophthalmus_maximus
ENSCPBG00000024454	-	63	32.719	ENSSMAG00000002904	zgc:123010	69	32.500	Scophthalmus_maximus
ENSCPBG00000024454	-	60	31.340	ENSSMAG00000021096	-	68	31.034	Scophthalmus_maximus
ENSCPBG00000024454	-	76	32.696	ENSSMAG00000008147	si:dkey-33c12.4	58	35.250	Scophthalmus_maximus
ENSCPBG00000024454	-	61	32.483	ENSSDUG00000008651	zgc:123010	58	33.427	Seriola_dumerili
ENSCPBG00000024454	-	60	31.604	ENSSDUG00000014026	-	70	31.250	Seriola_dumerili
ENSCPBG00000024454	-	60	33.634	ENSSDUG00000003213	si:dkey-33c12.4	90	31.972	Seriola_dumerili
ENSCPBG00000024454	-	50	35.356	ENSSDUG00000010976	-	60	35.027	Seriola_dumerili
ENSCPBG00000024454	-	59	34.389	ENSSLDG00000009448	si:dkey-33c12.4	84	33.037	Seriola_lalandi_dorsalis
ENSCPBG00000024454	-	50	34.392	ENSSLDG00000012846	-	62	34.048	Seriola_lalandi_dorsalis
ENSCPBG00000024454	-	74	30.769	ENSSLDG00000019386	zgc:123010	61	33.427	Seriola_lalandi_dorsalis
ENSCPBG00000024454	-	51	32.732	ENSSPAG00000004843	-	58	32.637	Stegastes_partitus
ENSCPBG00000024454	-	50	36.944	ENSSPAG00000022577	-	82	32.628	Stegastes_partitus
ENSCPBG00000024454	-	61	32.874	ENSSPAG00000013621	zgc:123010	58	33.708	Stegastes_partitus
ENSCPBG00000024454	-	62	31.090	ENSTRUG00000024824	zgc:123010	60	33.523	Takifugu_rubripes
ENSCPBG00000024454	-	54	36.220	ENSTRUG00000022374	si:dkey-33c12.4	77	32.037	Takifugu_rubripes
ENSCPBG00000024454	-	53	35.156	ENSTRUG00000000057	-	59	37.322	Takifugu_rubripes
ENSCPBG00000024454	-	53	32.620	ENSTNIG00000001303	zgc:123010	98	32.620	Tetraodon_nigroviridis
ENSCPBG00000024454	-	50	36.070	ENSTNIG00000010542	-	89	36.070	Tetraodon_nigroviridis
ENSCPBG00000024454	-	59	30.588	ENSXCOG00000012281	zgc:123010	72	32.329	Xiphophorus_couchianus
ENSCPBG00000024454	-	50	35.165	ENSXMAG00000018535	si:dkey-33c12.4	84	30.035	Xiphophorus_maculatus
ENSCPBG00000024454	-	60	31.905	ENSXMAG00000002598	zgc:123010	59	32.584	Xiphophorus_maculatus